RNA–Protein interactions for RNA: ENST00000444184.5

LINC00963-205, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 1,887 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-205ENST00000444184 NISCHQ9Y2I1 1504 aa42.52■■■■■ 4.4
LINC00963-205ENST00000444184 CCDC180Q9P1Z9 1646 aa37.09■■■■□ 3.53
LINC00963-205ENST00000444184 ZCCHC6Q5VYS8 1495 aaKnown RBP35.79■■■■□ 3.32
LINC00963-205ENST00000444184 SHROOM4Q9ULL8 1493 aa35.27■■■■□ 3.24
LINC00963-205ENST00000444184 DCAF8L2P0C7V8 631 aa35.23■■■■□ 3.23
LINC00963-205ENST00000444184 DCAF1Q9Y4B6 1507 aa35.17■■■■□ 3.22
LINC00963-205ENST00000444184 ABCC9O60706 1549 aa35.06■■■■□ 3.2
LINC00963-205ENST00000444184 MYO15BQ96JP2 1530 aa34.76■■■■□ 3.15
LINC00963-205ENST00000444184 NACADO15069 1562 aa34.53■■■■□ 3.12
LINC00963-205ENST00000444184 SUPT5HO00267 1087 aaKnown RBP34.24■■■■□ 3.07
LINC00963-205ENST00000444184 RB1CC1Q8TDY2 1594 aa34.23■■■■□ 3.07
LINC00963-205ENST00000444184 SCRIBQ14160 1630 aa34.09■■■■□ 3.05
LINC00963-205ENST00000444184 UNC13AQ9UPW8 1703 aa33.6■■■□□ 2.97
LINC00963-205ENST00000444184 BICRAQ9NZM4 1560 aa33.26■■■□□ 2.91
LINC00963-205ENST00000444184 RSF1Q96T23 1441 aaPredicted RBP33.25■■■□□ 2.91
LINC00963-205ENST00000444184 CECR2Q9BXF3 1484 aa33.07■■■□□ 2.88
LINC00963-205ENST00000444184 PABPN1Q86U42 306 aaKnown RBP eCLIP33.03■■■□□ 2.88
LINC00963-205ENST00000444184 CHIC1Q5VXU3 224 aa32.99■■■□□ 2.87
LINC00963-205ENST00000444184 MROH2BQ7Z745 1585 aa32.91■■■□□ 2.86
LINC00963-205ENST00000444184 BAZ1AQ9NRL2 1556 aaPredicted RBP32.82■■■□□ 2.84
LINC00963-205ENST00000444184 SMARCA4P51532 1647 aa32.7■■■□□ 2.82
LINC00963-205ENST00000444184 WIZO95785 1651 aa32.66■■■□□ 2.82
LINC00963-205ENST00000444184 PEG3Q9GZU2 1588 aa32.32■■■□□ 2.76
LINC00963-205ENST00000444184 TOP2AP11388 1531 aaKnown RBP32.28■■■□□ 2.76
LINC00963-205ENST00000444184 EIF4G1Q04637 1599 aaKnown RBP32.22■■■□□ 2.75
LINC00963-205ENST00000444184 ATAD2BQ9ULI0 1458 aa32.15■■■□□ 2.74
LINC00963-205ENST00000444184 SMARCA2P51531 1590 aa32.11■■■□□ 2.73
LINC00963-205ENST00000444184 TRIM41Q8WV44 630 aa32.11■■■□□ 2.73
LINC00963-205ENST00000444184 CCDC88BA6NC98 1476 aa32.04■■■□□ 2.72
LINC00963-205ENST00000444184 BAZ1BQ9UIG0 1483 aaKnown RBP31.95■■■□□ 2.7
LINC00963-205ENST00000444184 NCAPD3P42695 1498 aa31.88■■■□□ 2.69
LINC00963-205ENST00000444184 HMGXB3Q12766 1538 aa31.84■■■□□ 2.69
LINC00963-205ENST00000444184 LOC105371045A0A1W2PR82 267 aa31.82■■■□□ 2.69
LINC00963-205ENST00000444184 CC2D2AQ9P2K1 1620 aa31.75■■■□□ 2.67
LINC00963-205ENST00000444184 FAM9AQ8IZU1 332 aaPredicted RBP31.61■■■□□ 2.65
LINC00963-205ENST00000444184 ABCC8Q09428 1581 aa31.55■■■□□ 2.64
LINC00963-205ENST00000444184 WRNQ14191 1432 aaPredicted RBP eCLIP31.28■■■□□ 2.6
LINC00963-205ENST00000444184 EHMT2Q96KQ7 1210 aa31.21■■■□□ 2.59
LINC00963-205ENST00000444184 CFTRP13569 1480 aa31.17■■■□□ 2.58
LINC00963-205ENST00000444184 SOGA1O94964 1423 aa31.11■■■□□ 2.57
LINC00963-205ENST00000444184 SYNJ1O43426 1573 aa31.09■■■□□ 2.57
LINC00963-205ENST00000444184 EEA1Q15075 1411 aa31.07■■■□□ 2.56
LINC00963-205ENST00000444184 CADPSQ9ULU8 1353 aa31.04■■■□□ 2.56
LINC00963-205ENST00000444184 PRDM2Q13029 1718 aa31.03■■■□□ 2.56
LINC00963-205ENST00000444184 CSRNP3Q8WYN3 585 aa30.97■■■□□ 2.55
LINC00963-205ENST00000444184 DNAJC5BQ9UF47 199 aa30.97■■■□□ 2.55
LINC00963-205ENST00000444184 RUSC2Q8N2Y8 1516 aa30.96■■■□□ 2.55
LINC00963-205ENST00000444184 PCGF6Q9BYE7 350 aa30.95■■■□□ 2.54
LINC00963-205ENST00000444184 TOP2BQ02880 1626 aa30.89■■■□□ 2.53
LINC00963-205ENST00000444184 BIVM-ERCC5R4GMW8 1640 aa30.81■■■□□ 2.52
LINC00963-205ENST00000444184 NESP48681 1621 aa30.8■■■□□ 2.52
LINC00963-205ENST00000444184 LAMC3Q9Y6N6 1575 aa30.79■■■□□ 2.52
LINC00963-205ENST00000444184 TRIM26Q12899 539 aaPredicted RBP30.74■■■□□ 2.51
LINC00963-205ENST00000444184 TNIKQ9UKE5 1360 aa30.73■■■□□ 2.51
LINC00963-205ENST00000444184 CUX1P39880 1505 aa30.72■■■□□ 2.51
LINC00963-205ENST00000444184 GOLGA3Q08378 1498 aa30.7■■■□□ 2.51
LINC00963-205ENST00000444184 FANCD2Q9BXW9 1451 aa30.7■■■□□ 2.51
LINC00963-205ENST00000444184 UBTFP17480 764 aaKnown RBP30.69■■■□□ 2.5
LINC00963-205ENST00000444184 CEP164Q9UPV0 1460 aa30.64■■■□□ 2.49
LINC00963-205ENST00000444184 CEP162Q5TB80 1403 aa30.62■■■□□ 2.49
LINC00963-205ENST00000444184 KIF21BO75037 1637 aa30.59■■■□□ 2.49
LINC00963-205ENST00000444184 PDS5BQ9NTI5 1447 aa30.52■■■□□ 2.48
LINC00963-205ENST00000444184 KIF27Q86VH2 1401 aa30.45■■■□□ 2.46
LINC00963-205ENST00000444184 KIF21AQ7Z4S6 1674 aa30.44■■■□□ 2.46
LINC00963-205ENST00000444184 DNMBPQ6XZF7 1577 aa30.44■■■□□ 2.46
LINC00963-205ENST00000444184 HRCP23327 699 aa30.43■■■□□ 2.46
LINC00963-205ENST00000444184 RAPGEF2Q9Y4G8 1499 aa30.42■■■□□ 2.46
LINC00963-205ENST00000444184 TOPBP1Q92547 1522 aa30.38■■■□□ 2.45
LINC00963-205ENST00000444184 FGD5Q6ZNL6 1462 aa30.37■■■□□ 2.45
LINC00963-205ENST00000444184 URB2Q14146 1524 aaKnown RBP30.34■■■□□ 2.45
LINC00963-205ENST00000444184 PPARGC1BQ86YN6 1023 aaKnown RBP30.34■■■□□ 2.45
LINC00963-205ENST00000444184 PRXQ9BXM0 1461 aa30.34■■■□□ 2.45
LINC00963-205ENST00000444184 ERICH3Q5RHP9 1530 aa30.3■■■□□ 2.44
LINC00963-205ENST00000444184 CLIP1P30622 1438 aa30.27■■■□□ 2.44
LINC00963-205ENST00000444184 CUX2O14529 1486 aa30.26■■■□□ 2.43
LINC00963-205ENST00000444184 POLA1P09884 1462 aaPredicted RBP30.24■■■□□ 2.43
LINC00963-205ENST00000444184 MRC2Q9UBG0 1479 aa30.15■■■□□ 2.42
LINC00963-205ENST00000444184 IGF1RP08069 1367 aa30.15■■■□□ 2.42
LINC00963-205ENST00000444184 RAD54L2Q9Y4B4 1467 aa30.13■■■□□ 2.41
LINC00963-205ENST00000444184 ABCA10Q8WWZ4 1543 aa30.11■■■□□ 2.41
LINC00963-205ENST00000444184 RANGAP1P46060 587 aaPredicted RBP30.11■■■□□ 2.41
LINC00963-205ENST00000444184 WDR97A6NE52 1622 aa30.05■■■□□ 2.4
LINC00963-205ENST00000444184 VPS8Q8N3P4 1428 aa30.05■■■□□ 2.4
LINC00963-205ENST00000444184 ERCC6Q03468 1493 aa30.02■■■□□ 2.4
LINC00963-205ENST00000444184 WDR62O43379 1518 aa30.02■■■□□ 2.4
LINC00963-205ENST00000444184 CARMIL1Q5VZK9 1371 aa30.01■■■□□ 2.4
LINC00963-205ENST00000444184 TTBK1Q5TCY1 1321 aaPredicted RBP30■■■□□ 2.39
LINC00963-205ENST00000444184 TARBP1Q13395 1621 aaKnown RBP29.96■■■□□ 2.39
LINC00963-205ENST00000444184 THOC2Q8NI27 1593 aaKnown RBP29.95■■■□□ 2.39
LINC00963-205ENST00000444184 APLP2Q06481 763 aa29.9■■■□□ 2.38
LINC00963-205ENST00000444184 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.38
LINC00963-205ENST00000444184 ARAP1Q96P48 1450 aa29.85■■■□□ 2.37
LINC00963-205ENST00000444184 TDRD9Q8NDG6 1382 aaKnown RBP29.82■■■□□ 2.36
LINC00963-205ENST00000444184 GAPVD1Q14C86 1478 aa29.78■■■□□ 2.36
LINC00963-205ENST00000444184 ZEB1P37275 1124 aaPredicted RBP29.78■■■□□ 2.36
LINC00963-205ENST00000444184 IFT140Q96RY7 1462 aa29.77■■■□□ 2.36
LINC00963-205ENST00000444184 ARHGAP35Q9NRY4 1499 aa29.76■■■□□ 2.35
LINC00963-205ENST00000444184 CUL7Q14999 1698 aa29.75■■■□□ 2.35
LINC00963-205ENST00000444184 PBRM1Q86U86 1689 aa29.65■■■□□ 2.34
LINC00963-205ENST00000444184 AQRO60306 1485 aaKnown RBP eCLIP29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms