RNA–Protein interactions for RNA: ENST00000440284.6

ACSM3-202, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 1 (best) BASIC

Gene ACSM3, Length 1,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-202ENST00000440284 ABCA5Q8WWZ7 1642 aa15.49■□□□□ 0.07
ACSM3-202ENST00000440284 FHAD1B1AJZ9 1412 aa15.49■□□□□ 0.07
ACSM3-202ENST00000440284 PPP6R1Q9UPN7 881 aa15.48■□□□□ 0.07
ACSM3-202ENST00000440284 MAP3K1Q13233 1512 aa15.48■□□□□ 0.07
ACSM3-202ENST00000440284 EFCAB5A4FU69 1503 aa15.48■□□□□ 0.07
ACSM3-202ENST00000440284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.47■□□□□ 0.07
ACSM3-202ENST00000440284 TDRD9Q8NDG6 1382 aaKnown RBP15.45■□□□□ 0.06
ACSM3-202ENST00000440284 TARBP1Q13395 1621 aaKnown RBP15.44■□□□□ 0.06
ACSM3-202ENST00000440284 CTTNBP2Q8WZ74 1663 aa15.43■□□□□ 0.06
ACSM3-202ENST00000440284 IFT140Q96RY7 1462 aa15.39■□□□□ 0.05
ACSM3-202ENST00000440284 KANK4Q5T7N3 995 aaPredicted RBP15.39■□□□□ 0.05
ACSM3-202ENST00000440284 RRBP1Q9P2E9 1410 aaKnown RBP15.38■□□□□ 0.05
ACSM3-202ENST00000440284 AQRO60306 1485 aaKnown RBP eCLIP15.38■□□□□ 0.056e-7■■■□□ 19.1
ACSM3-202ENST00000440284 TIAM1Q13009 1591 aa15.38■□□□□ 0.05
ACSM3-202ENST00000440284 ADRA2BP18089 450 aa15.38■□□□□ 0.05
ACSM3-202ENST00000440284 HNRNPUL2Q1KMD3 747 aaKnown RBP15.38■□□□□ 0.05
ACSM3-202ENST00000440284 WDR62O43379 1518 aa15.37■□□□□ 0.05
ACSM3-202ENST00000440284 FMN1Q68DA7 1419 aa15.36■□□□□ 0.05
ACSM3-202ENST00000440284 GRIN2BQ13224 1484 aa15.34■□□□□ 0.05
ACSM3-202ENST00000440284 FYCO1Q9BQS8 1478 aa15.34■□□□□ 0.05
ACSM3-202ENST00000440284 CASKIN1Q8WXD9 1431 aa15.34■□□□□ 0.05
ACSM3-202ENST00000440284 PBRM1Q86U86 1689 aa15.33■□□□□ 0.04
ACSM3-202ENST00000440284 LRRC9Q6ZRR7 1453 aa15.31■□□□□ 0.04
ACSM3-202ENST00000440284 FHOD3Q2V2M9 1422 aa15.31■□□□□ 0.04
ACSM3-202ENST00000440284 CCNB3Q8WWL7 1395 aa15.31■□□□□ 0.04
ACSM3-202ENST00000440284 ERCC6Q03468 1493 aa15.31■□□□□ 0.04
ACSM3-202ENST00000440284 SAMD9Q5K651 1589 aa15.3■□□□□ 0.04
ACSM3-202ENST00000440284 P3H3Q8IVL6 736 aa15.3■□□□□ 0.04
ACSM3-202ENST00000440284 CFAP43Q8NDM7 1665 aa15.3■□□□□ 0.04
ACSM3-202ENST00000440284 PCF11O94913 1555 aaKnown RBP15.3■□□□□ 0.04
ACSM3-202ENST00000440284 CACNB1Q02641 598 aaPredicted RBP15.29■□□□□ 0.04
ACSM3-202ENST00000440284 ADAMTS12P58397 1594 aa15.29■□□□□ 0.04
ACSM3-202ENST00000440284 CLSPNQ9HAW4 1339 aa15.26■□□□□ 0.03
ACSM3-202ENST00000440284 ATP1B4Q9UN42 357 aaPredicted RBP15.24■□□□□ 0.03
ACSM3-202ENST00000440284 THOC2Q8NI27 1593 aaKnown RBP15.24■□□□□ 0.03
ACSM3-202ENST00000440284 IQGAP2Q13576 1575 aa15.21■□□□□ 0.03
ACSM3-202ENST00000440284 SNAPC4Q5SXM2 1469 aa15.21■□□□□ 0.03
ACSM3-202ENST00000440284 ZNF608Q9ULD9 1512 aaPredicted RBP15.2■□□□□ 0.02
ACSM3-202ENST00000440284 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.2■□□□□ 0.02
ACSM3-202ENST00000440284 MAGI1Q96QZ7 1491 aaPredicted RBP15.17■□□□□ 0.02
ACSM3-202ENST00000440284 UGGT2Q9NYU1 1516 aa15.17■□□□□ 0.02
ACSM3-202ENST00000440284 PHLDB1Q86UU1 1377 aa15.16■□□□□ 0.02
ACSM3-202ENST00000440284 CCDC18Q5T9S5 1454 aa15.16■□□□□ 0.02
ACSM3-202ENST00000440284 KIAA0586Q9BVV6 1533 aa15.16■□□□□ 0.02
ACSM3-202ENST00000440284 EIF4G3O43432 1585 aaKnown RBP15.16■□□□□ 0.02
ACSM3-202ENST00000440284 MTUS2Q5JR59 1369 aa15.15■□□□□ 0.02
ACSM3-202ENST00000440284 DHX57Q6P158 1386 aaKnown RBP15.13■□□□□ 0.01
ACSM3-202ENST00000440284 GRIN2AQ12879 1464 aa15.13■□□□□ 0.01
ACSM3-202ENST00000440284 HECW1Q76N89 1606 aa15.12■□□□□ 0.01
ACSM3-202ENST00000440284 EHBP1L1Q8N3D4 1523 aa15.11■□□□□ 0.01
ACSM3-202ENST00000440284 KCNA4P22459 653 aa15.11■□□□□ 0.01
ACSM3-202ENST00000440284 SYNJ2O15056 1496 aa15.1■□□□□ 0.01
ACSM3-202ENST00000440284 FAM50AQ14320 339 aaKnown RBP15.1■□□□□ 0.01
ACSM3-202ENST00000440284 SETD5Q9C0A6 1442 aa15.1■□□□□ 0.01
ACSM3-202ENST00000440284 CHMP7Q8WUX9 453 aaPredicted RBP15.09■□□□□ 0.01
ACSM3-202ENST00000440284 ITGAEP38570 1179 aa15.08■□□□□ 0.01
ACSM3-202ENST00000440284 SUPT6HQ7KZ85 1726 aaKnown RBP15.07■□□□□ 0
ACSM3-202ENST00000440284 ZNF316A6NFI3 1004 aaPredicted RBP15.07■□□□□ 0
ACSM3-202ENST00000440284 FGD6Q6ZV73 1430 aa15.07■□□□□ 0
ACSM3-202ENST00000440284 KIAA0556O60303 1618 aa15.05■□□□□ -0
ACSM3-202ENST00000440284 RAB3GAP2Q9H2M9 1393 aa15.05■□□□□ -0
ACSM3-202ENST00000440284 NCOA2Q15596 1464 aa15.05■□□□□ -0
ACSM3-202ENST00000440284 MYOM3Q5VTT5 1437 aa15.04■□□□□ -0
ACSM3-202ENST00000440284 EPRSP07814 1512 aaKnown RBP15.03■□□□□ -0
ACSM3-202ENST00000440284 LRRIQ1Q96JM4 1722 aa15.02■□□□□ -0
ACSM3-202ENST00000440284 DISP1Q96F81 1524 aa15.02■□□□□ -0
ACSM3-202ENST00000440284 ARHGEF11O15085 1522 aa15.01□□□□□ -0.01
ACSM3-202ENST00000440284 NUP160Q12769 1436 aa15.01□□□□□ -0.01
ACSM3-202ENST00000440284 CARMIL2Q6F5E8 1435 aa15.01□□□□□ -0.01
ACSM3-202ENST00000440284 DIEXFQ68CQ4 756 aaKnown RBP15□□□□□ -0.01
ACSM3-202ENST00000440284 CDK11AQ9UQ88 783 aaPredicted RBP15□□□□□ -0.01
ACSM3-202ENST00000440284 CEP170Q5SW79 1584 aa14.98□□□□□ -0.01
ACSM3-202ENST00000440284 MIA2Q96PC5 1412 aa14.97□□□□□ -0.01
ACSM3-202ENST00000440284 FBLN2P98095 1184 aa14.97□□□□□ -0.01
ACSM3-202ENST00000440284 RAPGEF6Q8TEU7 1601 aa14.96□□□□□ -0.02
ACSM3-202ENST00000440284 TCOF1Q13428 1488 aaKnown RBP14.95□□□□□ -0.02
ACSM3-202ENST00000440284 JPH4Q96JJ6 628 aa14.95□□□□□ -0.02
ACSM3-202ENST00000440284 MAGI3Q5TCQ9 1506 aa14.94□□□□□ -0.02
ACSM3-202ENST00000440284 PTPN23Q9H3S7 1636 aa14.94□□□□□ -0.02
ACSM3-202ENST00000440284 TIMELESSQ9UNS1 1208 aa14.93□□□□□ -0.02
ACSM3-202ENST00000440284 ACIN1Q9UKV3 1341 aaKnown RBP14.93□□□□□ -0.02
ACSM3-202ENST00000440284 CDK13Q14004 1512 aaKnown RBP14.92□□□□□ -0.02
ACSM3-202ENST00000440284 HFM1A2PYH4 1435 aa14.92□□□□□ -0.02
ACSM3-202ENST00000440284 NUP153P49790 1475 aaKnown RBP14.91□□□□□ -0.02
ACSM3-202ENST00000440284 MAPKBP1O60336 1514 aa14.89□□□□□ -0.03
ACSM3-202ENST00000440284 AKNAQ7Z591 1439 aa14.88□□□□□ -0.03
ACSM3-202ENST00000440284 TROQ12816 1431 aaPredicted RBP14.86□□□□□ -0.03
ACSM3-202ENST00000440284 PTPRKQ15262 1439 aa14.85□□□□□ -0.03
ACSM3-202ENST00000440284 UACAQ9BZF9 1416 aa14.85□□□□□ -0.03
ACSM3-202ENST00000440284 NAIPQ13075 1403 aa14.84□□□□□ -0.03
ACSM3-202ENST00000440284 PLB1Q6P1J6 1458 aa14.82□□□□□ -0.04
ACSM3-202ENST00000440284 ABCA8O94911 1581 aa14.81□□□□□ -0.04
ACSM3-202ENST00000440284 ARID3CA6NKF2 412 aa14.81□□□□□ -0.04
ACSM3-202ENST00000440284 ADCY10Q96PN6 1610 aa14.79□□□□□ -0.04
ACSM3-202ENST00000440284 ROCK1Q13464 1354 aa14.79□□□□□ -0.04
ACSM3-202ENST00000440284 PLEKHD1A6NEE1 506 aa14.79□□□□□ -0.04
ACSM3-202ENST00000440284 GCC2Q8IWJ2 1684 aa14.78□□□□□ -0.04
ACSM3-202ENST00000440284 PRG4Q92954 1404 aaPredicted RBP14.78□□□□□ -0.04
ACSM3-202ENST00000440284 ITSN2Q9NZM3 1697 aa14.78□□□□□ -0.04
ACSM3-202ENST00000440284 PTPRGP23470 1445 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms