RNA–Protein interactions for RNA: ENST00000440284.6

ACSM3-202, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 1 (best) BASIC

Gene ACSM3, Length 1,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-202ENST00000440284 NISCHQ9Y2I1 1504 aa22.23■■□□□ 1.15
ACSM3-202ENST00000440284 AEBP2Q6ZN18 517 aaPredicted RBP21.41■■□□□ 1.02
ACSM3-202ENST00000440284 CHIC1Q5VXU3 224 aa20.19■□□□□ 0.82
ACSM3-202ENST00000440284 CCDC180Q9P1Z9 1646 aa19.22■□□□□ 0.67
ACSM3-202ENST00000440284 ZCCHC6Q5VYS8 1495 aaKnown RBP18.73■□□□□ 0.59
ACSM3-202ENST00000440284 POTEDQ86YR6 584 aa18.68■□□□□ 0.58
ACSM3-202ENST00000440284 SENP3Q9H4L4 574 aaPredicted RBP18.67■□□□□ 0.58
ACSM3-202ENST00000440284 DCAF1Q9Y4B6 1507 aa18.43■□□□□ 0.54
ACSM3-202ENST00000440284 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.52
ACSM3-202ENST00000440284 DCAF8L2P0C7V8 631 aa18.27■□□□□ 0.51
ACSM3-202ENST00000440284 PHF23Q9BUL5 403 aaPredicted RBP18.13■□□□□ 0.49
ACSM3-202ENST00000440284 MYO15BQ96JP2 1530 aa18.09■□□□□ 0.49
ACSM3-202ENST00000440284 SUPT5HO00267 1087 aaKnown RBP17.87■□□□□ 0.45
ACSM3-202ENST00000440284 NACADO15069 1562 aa17.85■□□□□ 0.45
ACSM3-202ENST00000440284 ABCC9O60706 1549 aa17.83■□□□□ 0.45
ACSM3-202ENST00000440284 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
ACSM3-202ENST00000440284 RB1CC1Q8TDY2 1594 aa17.61■□□□□ 0.41
ACSM3-202ENST00000440284 FOXD1Q16676 465 aa17.42■□□□□ 0.38
ACSM3-202ENST00000440284 RSF1Q96T23 1441 aaPredicted RBP17.38■□□□□ 0.37
ACSM3-202ENST00000440284 CECR2Q9BXF3 1484 aa17.19■□□□□ 0.34
ACSM3-202ENST00000440284 BAZ1AQ9NRL2 1556 aaPredicted RBP17.16■□□□□ 0.34
ACSM3-202ENST00000440284 MROH2BQ7Z745 1585 aa17.14■□□□□ 0.33
ACSM3-202ENST00000440284 UNC13AQ9UPW8 1703 aa17.14■□□□□ 0.33
ACSM3-202ENST00000440284 WIZO95785 1651 aa17.01■□□□□ 0.31
ACSM3-202ENST00000440284 BICRAQ9NZM4 1560 aa16.99■□□□□ 0.31
ACSM3-202ENST00000440284 SMARCA4P51532 1647 aa16.99■□□□□ 0.31
ACSM3-202ENST00000440284 MSH5O43196 834 aa16.98■□□□□ 0.31
ACSM3-202ENST00000440284 TOP2AP11388 1531 aaKnown RBP16.9■□□□□ 0.3
ACSM3-202ENST00000440284 PABPN1Q86U42 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
ACSM3-202ENST00000440284 TRIM41Q8WV44 630 aa16.83■□□□□ 0.28
ACSM3-202ENST00000440284 PEG3Q9GZU2 1588 aa16.79■□□□□ 0.28
ACSM3-202ENST00000440284 SMARCA2P51531 1590 aa16.72■□□□□ 0.27
ACSM3-202ENST00000440284 CCDC88BA6NC98 1476 aa16.72■□□□□ 0.27
ACSM3-202ENST00000440284 EIF4G1Q04637 1599 aaKnown RBP16.69■□□□□ 0.26
ACSM3-202ENST00000440284 ATAD2BQ9ULI0 1458 aa16.65■□□□□ 0.26
ACSM3-202ENST00000440284 LOC105371045A0A1W2PR82 267 aa16.6■□□□□ 0.25
ACSM3-202ENST00000440284 BAZ1BQ9UIG0 1483 aaKnown RBP16.59■□□□□ 0.25
ACSM3-202ENST00000440284 NCAPD3P42695 1498 aa16.47■□□□□ 0.23
ACSM3-202ENST00000440284 HMGXB3Q12766 1538 aa16.47■□□□□ 0.23
ACSM3-202ENST00000440284 FAM9AQ8IZU1 332 aaPredicted RBP16.46■□□□□ 0.23
ACSM3-202ENST00000440284 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
ACSM3-202ENST00000440284 EEA1Q15075 1411 aa16.4■□□□□ 0.22
ACSM3-202ENST00000440284 WRNQ14191 1432 aaPredicted RBP eCLIP16.38■□□□□ 0.21
ACSM3-202ENST00000440284 PLPPR3Q6T4P5 718 aa16.31■□□□□ 0.2
ACSM3-202ENST00000440284 PCGF6Q9BYE7 350 aa16.25■□□□□ 0.19
ACSM3-202ENST00000440284 TRIM26Q12899 539 aaPredicted RBP16.24■□□□□ 0.19
ACSM3-202ENST00000440284 CSRNP3Q8WYN3 585 aa16.24■□□□□ 0.19
ACSM3-202ENST00000440284 SOGA1O94964 1423 aa16.23■□□□□ 0.19
ACSM3-202ENST00000440284 SYNJ1O43426 1573 aa16.21■□□□□ 0.19
ACSM3-202ENST00000440284 CFTRP13569 1480 aa16.19■□□□□ 0.18
ACSM3-202ENST00000440284 TNIKQ9UKE5 1360 aa16.17■□□□□ 0.18
ACSM3-202ENST00000440284 TOP2BQ02880 1626 aa16.17■□□□□ 0.18
ACSM3-202ENST00000440284 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
ACSM3-202ENST00000440284 GOLGA3Q08378 1498 aa16.15■□□□□ 0.18
ACSM3-202ENST00000440284 CC2D2AQ9P2K1 1620 aa16.14■□□□□ 0.17
ACSM3-202ENST00000440284 BIVM-ERCC5R4GMW8 1640 aa16.14■□□□□ 0.17
ACSM3-202ENST00000440284 RUSC2Q8N2Y8 1516 aa16.12■□□□□ 0.17
ACSM3-202ENST00000440284 HRCP23327 699 aa16.11■□□□□ 0.17
ACSM3-202ENST00000440284 CEP164Q9UPV0 1460 aa16.11■□□□□ 0.17
ACSM3-202ENST00000440284 CADPSQ9ULU8 1353 aa16.09■□□□□ 0.17
ACSM3-202ENST00000440284 PRDM2Q13029 1718 aa16.09■□□□□ 0.17
ACSM3-202ENST00000440284 KIF21BO75037 1637 aa16.08■□□□□ 0.16
ACSM3-202ENST00000440284 UBTFP17480 764 aaKnown RBP16.06■□□□□ 0.16
ACSM3-202ENST00000440284 CEP162Q5TB80 1403 aa16.05■□□□□ 0.16
ACSM3-202ENST00000440284 PIAS4Q8N2W9 510 aaPredicted RBP16.02■□□□□ 0.15
ACSM3-202ENST00000440284 CUX1P39880 1505 aa16.01■□□□□ 0.15
ACSM3-202ENST00000440284 KIF27Q86VH2 1401 aa15.96■□□□□ 0.14
ACSM3-202ENST00000440284 ERICH3Q5RHP9 1530 aa15.93■□□□□ 0.14
ACSM3-202ENST00000440284 PRXQ9BXM0 1461 aa15.9■□□□□ 0.14
ACSM3-202ENST00000440284 RAPGEF2Q9Y4G8 1499 aa15.89■□□□□ 0.13
ACSM3-202ENST00000440284 FANCD2Q9BXW9 1451 aa15.88■□□□□ 0.13
ACSM3-202ENST00000440284 ZEB1P37275 1124 aaPredicted RBP15.88■□□□□ 0.13
ACSM3-202ENST00000440284 CLIP1P30622 1438 aa15.87■□□□□ 0.13
ACSM3-202ENST00000440284 LAMC3Q9Y6N6 1575 aa15.85■□□□□ 0.13
ACSM3-202ENST00000440284 DNMBPQ6XZF7 1577 aa15.81■□□□□ 0.12
ACSM3-202ENST00000440284 FGD5Q6ZNL6 1462 aa15.81■□□□□ 0.12
ACSM3-202ENST00000440284 CUX2O14529 1486 aa15.8■□□□□ 0.12
ACSM3-202ENST00000440284 VPS8Q8N3P4 1428 aa15.79■□□□□ 0.12
ACSM3-202ENST00000440284 PPARGC1BQ86YN6 1023 aaKnown RBP15.77■□□□□ 0.11
ACSM3-202ENST00000440284 PDS5BQ9NTI5 1447 aa15.76■□□□□ 0.11
ACSM3-202ENST00000440284 IGF1RP08069 1367 aa15.75■□□□□ 0.11
ACSM3-202ENST00000440284 APLP2Q06481 763 aa15.74■□□□□ 0.11
ACSM3-202ENST00000440284 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
ACSM3-202ENST00000440284 NESP48681 1621 aa15.73■□□□□ 0.11
ACSM3-202ENST00000440284 ABCA10Q8WWZ4 1543 aa15.7■□□□□ 0.1
ACSM3-202ENST00000440284 CARMIL1Q5VZK9 1371 aa15.7■□□□□ 0.1
ACSM3-202ENST00000440284 POLA1P09884 1462 aaPredicted RBP15.68■□□□□ 0.1
ACSM3-202ENST00000440284 ARAP1Q96P48 1450 aa15.62■□□□□ 0.09
ACSM3-202ENST00000440284 URB2Q14146 1524 aaKnown RBP15.62■□□□□ 0.09
ACSM3-202ENST00000440284 RAD54L2Q9Y4B4 1467 aa15.62■□□□□ 0.09
ACSM3-202ENST00000440284 RANGAP1P46060 587 aaPredicted RBP15.61■□□□□ 0.09
ACSM3-202ENST00000440284 CUL7Q14999 1698 aa15.6■□□□□ 0.09
ACSM3-202ENST00000440284 TTBK1Q5TCY1 1321 aaPredicted RBP15.58■□□□□ 0.08
ACSM3-202ENST00000440284 ARHGAP35Q9NRY4 1499 aa15.57■□□□□ 0.08
ACSM3-202ENST00000440284 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
ACSM3-202ENST00000440284 KIF21AQ7Z4S6 1674 aa15.54■□□□□ 0.08
ACSM3-202ENST00000440284 DNAJC5BQ9UF47 199 aa15.53■□□□□ 0.08
ACSM3-202ENST00000440284 CCER1Q8TC90 406 aaPredicted RBP15.53■□□□□ 0.08
ACSM3-202ENST00000440284 GAPVD1Q14C86 1478 aa15.5■□□□□ 0.07
ACSM3-202ENST00000440284 MRC2Q9UBG0 1479 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms