RNA–Protein interactions for RNA: ENST00000439987.6

IFT140-204, Transcript of intraflagellar transport 140, humanhuman

TSL 2

Gene IFT140, Length 2,580 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-204ENST00000439987 HRCP23327 699 aa23.11■■□□□ 1.29
IFT140-204ENST00000439987 ADAMTS12P58397 1594 aa23.1■■□□□ 1.29
IFT140-204ENST00000439987 TTBK1Q5TCY1 1321 aaPredicted RBP23.09■■□□□ 1.29
IFT140-204ENST00000439987 APLP2Q06481 763 aa23.09■■□□□ 1.29
IFT140-204ENST00000439987 EIF4G3O43432 1585 aaKnown RBP23.08■■□□□ 1.28
IFT140-204ENST00000439987 EFCAB5A4FU69 1503 aa23.03■■□□□ 1.28
IFT140-204ENST00000439987 SNAPC4Q5SXM2 1469 aa22.98■■□□□ 1.27
IFT140-204ENST00000439987 P3H3Q8IVL6 736 aa22.95■■□□□ 1.26
IFT140-204ENST00000439987 FHOD3Q2V2M9 1422 aa22.94■■□□□ 1.26
IFT140-204ENST00000439987 MAGI1Q96QZ7 1491 aaPredicted RBP22.93■■□□□ 1.26
IFT140-204ENST00000439987 SAMD9Q5K651 1589 aa22.92■■□□□ 1.26
IFT140-204ENST00000439987 IQGAP2Q13576 1575 aa22.88■■□□□ 1.25
IFT140-204ENST00000439987 GRIN2AQ12879 1464 aa22.88■■□□□ 1.25
IFT140-204ENST00000439987 KANK4Q5T7N3 995 aaPredicted RBP22.87■■□□□ 1.25
IFT140-204ENST00000439987 MAP3K1Q13233 1512 aa22.86■■□□□ 1.25
IFT140-204ENST00000439987 PCF11O94913 1555 aaKnown RBP22.86■■□□□ 1.25
IFT140-204ENST00000439987 SYNJ2O15056 1496 aa22.85■■□□□ 1.25
IFT140-204ENST00000439987 FMN1Q68DA7 1419 aa22.84■■□□□ 1.25
IFT140-204ENST00000439987 TIAM1Q13009 1591 aa22.82■■□□□ 1.24
IFT140-204ENST00000439987 FYCO1Q9BQS8 1478 aa22.82■■□□□ 1.24
IFT140-204ENST00000439987 CASKIN1Q8WXD9 1431 aa22.81■■□□□ 1.24
IFT140-204ENST00000439987 KIAA0586Q9BVV6 1533 aa22.81■■□□□ 1.24
IFT140-204ENST00000439987 CHMP7Q8WUX9 453 aaPredicted RBP22.8■■□□□ 1.24
IFT140-204ENST00000439987 UGGT2Q9NYU1 1516 aa22.77■■□□□ 1.24
IFT140-204ENST00000439987 CFAP43Q8NDM7 1665 aa22.75■■□□□ 1.23
IFT140-204ENST00000439987 FBLN2P98095 1184 aa22.73■■□□□ 1.23
IFT140-204ENST00000439987 ATP1B4Q9UN42 357 aaPredicted RBP22.73■■□□□ 1.23
IFT140-204ENST00000439987 CEP170Q5SW79 1584 aa22.73■■□□□ 1.23
IFT140-204ENST00000439987 LRRC9Q6ZRR7 1453 aa22.72■■□□□ 1.23
IFT140-204ENST00000439987 NUP160Q12769 1436 aa22.7■■□□□ 1.22
IFT140-204ENST00000439987 DISP1Q96F81 1524 aa22.66■■□□□ 1.22
IFT140-204ENST00000439987 KIAA0556O60303 1618 aa22.65■■□□□ 1.22
IFT140-204ENST00000439987 RRBP1Q9P2E9 1410 aaKnown RBP22.65■■□□□ 1.22
IFT140-204ENST00000439987 LRRIQ1Q96JM4 1722 aa22.61■■□□□ 1.21
IFT140-204ENST00000439987 HNRNPUL2Q1KMD3 747 aaKnown RBP22.6■■□□□ 1.21
IFT140-204ENST00000439987 ZEB1P37275 1124 aaPredicted RBP22.59■■□□□ 1.21
IFT140-204ENST00000439987 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.57■■□□□ 1.2
IFT140-204ENST00000439987 HECW1Q76N89 1606 aa22.57■■□□□ 1.2
IFT140-204ENST00000439987 CCNB3Q8WWL7 1395 aa22.57■■□□□ 1.2
IFT140-204ENST00000439987 JPH4Q96JJ6 628 aa22.55■■□□□ 1.2
IFT140-204ENST00000439987 CCDC18Q5T9S5 1454 aa22.55■■□□□ 1.2
IFT140-204ENST00000439987 CHD1O14646 1710 aa22.54■■□□□ 1.2
IFT140-204ENST00000439987 PHLDB1Q86UU1 1377 aa22.54■■□□□ 1.2
IFT140-204ENST00000439987 MTUS2Q5JR59 1369 aa22.52■■□□□ 1.2
IFT140-204ENST00000439987 CARMIL2Q6F5E8 1435 aa22.51■■□□□ 1.19
IFT140-204ENST00000439987 CCER1Q8TC90 406 aaPredicted RBP22.51■■□□□ 1.19
IFT140-204ENST00000439987 EPRSP07814 1512 aaKnown RBP22.5■■□□□ 1.19
IFT140-204ENST00000439987 EHBP1L1Q8N3D4 1523 aa22.47■■□□□ 1.19
IFT140-204ENST00000439987 RAPGEF6Q8TEU7 1601 aa22.45■■□□□ 1.18
IFT140-204ENST00000439987 CDK13Q14004 1512 aaKnown RBP22.43■■□□□ 1.18
IFT140-204ENST00000439987 MAGI3Q5TCQ9 1506 aa22.43■■□□□ 1.18
IFT140-204ENST00000439987 NUP153P49790 1475 aaKnown RBP22.42■■□□□ 1.18
IFT140-204ENST00000439987 SUPT6HQ7KZ85 1726 aaKnown RBP22.42■■□□□ 1.18
IFT140-204ENST00000439987 NCOA2Q15596 1464 aa22.4■■□□□ 1.18
IFT140-204ENST00000439987 PRG4Q92954 1404 aaPredicted RBP22.38■■□□□ 1.17
IFT140-204ENST00000439987 PLB1Q6P1J6 1458 aa22.37■■□□□ 1.17
IFT140-204ENST00000439987 ARID3CA6NKF2 412 aa22.37■■□□□ 1.17
IFT140-204ENST00000439987 FGD6Q6ZV73 1430 aa22.36■■□□□ 1.17
IFT140-204ENST00000439987 ARHGEF11O15085 1522 aa22.36■■□□□ 1.17
IFT140-204ENST00000439987 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.36■■□□□ 1.17
IFT140-204ENST00000439987 SHROOM2Q13796 1616 aa22.35■■□□□ 1.17
IFT140-204ENST00000439987 FAM50AQ14320 339 aaKnown RBP22.35■■□□□ 1.17
IFT140-204ENST00000439987 ITGAEP38570 1179 aa22.34■■□□□ 1.17
IFT140-204ENST00000439987 PELP1Q8IZL8 1130 aaKnown RBP22.34■■□□□ 1.17
IFT140-204ENST00000439987 MYOM3Q5VTT5 1437 aa22.34■■□□□ 1.17
IFT140-204ENST00000439987 ABCA8O94911 1581 aa22.3■■□□□ 1.16
IFT140-204ENST00000439987 CDK11AQ9UQ88 783 aaPredicted RBP22.28■■□□□ 1.16
IFT140-204ENST00000439987 CLASP1Q7Z460 1538 aa22.28■■□□□ 1.16
IFT140-204ENST00000439987 PTPRGP23470 1445 aa22.27■■□□□ 1.16
IFT140-204ENST00000439987 PTPN23Q9H3S7 1636 aa22.21■■□□□ 1.15
IFT140-204ENST00000439987 TROQ12816 1431 aaPredicted RBP22.21■■□□□ 1.15
IFT140-204ENST00000439987 ERCC6L2Q5T890 1561 aa22.2■■□□□ 1.14
IFT140-204ENST00000439987 MIA2Q96PC5 1412 aa22.19■■□□□ 1.14
IFT140-204ENST00000439987 ATP10BO94823 1461 aa22.18■■□□□ 1.14
IFT140-204ENST00000439987 TCOF1Q13428 1488 aaKnown RBP22.18■■□□□ 1.14
IFT140-204ENST00000439987 SETD5Q9C0A6 1442 aa22.18■■□□□ 1.14
IFT140-204ENST00000439987 RAB3GAP2Q9H2M9 1393 aa22.17■■□□□ 1.14
IFT140-204ENST00000439987 DHX57Q6P158 1386 aaKnown RBP22.17■■□□□ 1.14
IFT140-204ENST00000439987 UACAQ9BZF9 1416 aa22.14■■□□□ 1.14
IFT140-204ENST00000439987 ADCY10Q96PN6 1610 aa22.14■■□□□ 1.13
IFT140-204ENST00000439987 PTPRKQ15262 1439 aa22.12■■□□□ 1.13
IFT140-204ENST00000439987 CLSPNQ9HAW4 1339 aa22.12■■□□□ 1.13
IFT140-204ENST00000439987 PLEKHD1A6NEE1 506 aa22.11■■□□□ 1.13
IFT140-204ENST00000439987 KIF14Q15058 1648 aa22.1■■□□□ 1.13
IFT140-204ENST00000439987 ABCC2Q92887 1545 aa22.07■■□□□ 1.12
IFT140-204ENST00000439987 HFM1A2PYH4 1435 aa22.05■■□□□ 1.12
IFT140-204ENST00000439987 ITSN2Q9NZM3 1697 aa22.05■■□□□ 1.12
IFT140-204ENST00000439987 GPATCH8Q9UKJ3 1502 aaKnown RBP22.04■■□□□ 1.12
IFT140-204ENST00000439987 ABCC10Q5T3U5 1492 aa22.01■■□□□ 1.11
IFT140-204ENST00000439987 CFDP1Q9UEE9 299 aaPredicted RBP21.99■■□□□ 1.11
IFT140-204ENST00000439987 NAIPQ13075 1403 aa21.99■■□□□ 1.11
IFT140-204ENST00000439987 UHRF1BP1LA0JNW5 1464 aa21.99■■□□□ 1.11
IFT140-204ENST00000439987 OSCARQ8IYS5 282 aa21.98■■□□□ 1.11
IFT140-204ENST00000439987 ZNF644Q9H582 1327 aaPredicted RBP21.98■■□□□ 1.11
IFT140-204ENST00000439987 DNMT1P26358 1616 aaKnown RBP21.97■■□□□ 1.11
IFT140-204ENST00000439987 DAPK1P53355 1430 aa21.96■■□□□ 1.11
IFT140-204ENST00000439987 AKNAQ7Z591 1439 aa21.96■■□□□ 1.11
IFT140-204ENST00000439987 CDC42BPAQ5VT25 1732 aa21.96■■□□□ 1.11
IFT140-204ENST00000439987 CAMSAP2Q08AD1 1489 aa21.96■■□□□ 1.11
IFT140-204ENST00000439987 CHIC2Q9UKJ5 165 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms