RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
SF1-209ENST00000433274 CTTNBP2Q8WZ74 1663 aa23.36■■□□□ 1.33
SF1-209ENST00000433274 FHAD1B1AJZ9 1412 aa23.33■■□□□ 1.32
SF1-209ENST00000433274 P3H3Q8IVL6 736 aa23.31■■□□□ 1.32
SF1-209ENST00000433274 ADAMTS12P58397 1594 aa23.3■■□□□ 1.32
SF1-209ENST00000433274 EIF4G3O43432 1585 aaKnown RBP23.28■■□□□ 1.32
SF1-209ENST00000433274 EFCAB5A4FU69 1503 aa23.25■■□□□ 1.31
SF1-209ENST00000433274 FHOD3Q2V2M9 1422 aa23.24■■□□□ 1.31
SF1-209ENST00000433274 KANK4Q5T7N3 995 aaPredicted RBP23.22■■□□□ 1.31
SF1-209ENST00000433274 SNAPC4Q5SXM2 1469 aa23.22■■□□□ 1.31
SF1-209ENST00000433274 PCF11O94913 1555 aaKnown RBP23.13■■□□□ 1.29
SF1-209ENST00000433274 SAMD9Q5K651 1589 aa23.13■■□□□ 1.29
SF1-209ENST00000433274 ATP1B4Q9UN42 357 aaPredicted RBP23.12■■□□□ 1.29
SF1-209ENST00000433274 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
SF1-209ENST00000433274 IQGAP2Q13576 1575 aa23.11■■□□□ 1.29
SF1-209ENST00000433274 TIAM1Q13009 1591 aa23.09■■□□□ 1.29
SF1-209ENST00000433274 GRIN2AQ12879 1464 aa23.09■■□□□ 1.29
SF1-209ENST00000433274 FMN1Q68DA7 1419 aa23.09■■□□□ 1.29
SF1-209ENST00000433274 MAP3K1Q13233 1512 aa23.08■■□□□ 1.28
SF1-209ENST00000433274 CHMP7Q8WUX9 453 aaPredicted RBP23.07■■□□□ 1.28
SF1-209ENST00000433274 FYCO1Q9BQS8 1478 aa23.06■■□□□ 1.28
SF1-209ENST00000433274 CASKIN1Q8WXD9 1431 aa23.06■■□□□ 1.28
SF1-209ENST00000433274 SYNJ2O15056 1496 aa23.04■■□□□ 1.28
SF1-209ENST00000433274 FBLN2P98095 1184 aa23.04■■□□□ 1.28
SF1-209ENST00000433274 HNRNPUL2Q1KMD3 747 aaKnown RBP23.03■■□□□ 1.28
SF1-209ENST00000433274 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.02■■□□□ 1.28
SF1-209ENST00000433274 KIAA0586Q9BVV6 1533 aa23.02■■□□□ 1.28
SF1-209ENST00000433274 LRRC9Q6ZRR7 1453 aa23■■□□□ 1.27
SF1-209ENST00000433274 CFAP43Q8NDM7 1665 aa22.99■■□□□ 1.27
SF1-209ENST00000433274 ZEB1P37275 1124 aaPredicted RBP22.98■■□□□ 1.27
SF1-209ENST00000433274 UGGT2Q9NYU1 1516 aa22.97■■□□□ 1.27
SF1-209ENST00000433274 CCER1Q8TC90 406 aaPredicted RBP22.94■■□□□ 1.26
SF1-209ENST00000433274 CEP170Q5SW79 1584 aa22.94■■□□□ 1.26
SF1-209ENST00000433274 RRBP1Q9P2E9 1410 aaKnown RBP22.92■■□□□ 1.26
SF1-209ENST00000433274 NUP160Q12769 1436 aa22.88■■□□□ 1.25
SF1-209ENST00000433274 DISP1Q96F81 1524 aa22.88■■□□□ 1.25
SF1-209ENST00000433274 CCNB3Q8WWL7 1395 aa22.88■■□□□ 1.25
SF1-209ENST00000433274 KIAA0556O60303 1618 aa22.87■■□□□ 1.25
SF1-209ENST00000433274 LRRIQ1Q96JM4 1722 aa22.85■■□□□ 1.25
SF1-209ENST00000433274 PHLDB1Q86UU1 1377 aa22.85■■□□□ 1.25
SF1-209ENST00000433274 MTUS2Q5JR59 1369 aa22.82■■□□□ 1.24
SF1-209ENST00000433274 HECW1Q76N89 1606 aa22.8■■□□□ 1.24
SF1-209ENST00000433274 JPH4Q96JJ6 628 aa22.8■■□□□ 1.24
SF1-209ENST00000433274 CCDC18Q5T9S5 1454 aa22.77■■□□□ 1.24
SF1-209ENST00000433274 ITGAEP38570 1179 aa22.76■■□□□ 1.23
SF1-209ENST00000433274 ARID3CA6NKF2 412 aa22.75■■□□□ 1.23
SF1-209ENST00000433274 EPRSP07814 1512 aaKnown RBP22.75■■□□□ 1.23
SF1-209ENST00000433274 CARMIL2Q6F5E8 1435 aa22.73■■□□□ 1.23
SF1-209ENST00000433274 CHD1O14646 1710 aa22.72■■□□□ 1.23
SF1-209ENST00000433274 FAM50AQ14320 339 aaKnown RBP22.72■■□□□ 1.23
SF1-209ENST00000433274 CDK13Q14004 1512 aaKnown RBP22.72■■□□□ 1.23
SF1-209ENST00000433274 EHBP1L1Q8N3D4 1523 aa22.71■■□□□ 1.23
SF1-209ENST00000433274 MAGI3Q5TCQ9 1506 aa22.7■■□□□ 1.22
SF1-209ENST00000433274 NCOA2Q15596 1464 aa22.68■■□□□ 1.22
SF1-209ENST00000433274 RAPGEF6Q8TEU7 1601 aa22.67■■□□□ 1.22
SF1-209ENST00000433274 NUP153P49790 1475 aaKnown RBP22.66■■□□□ 1.22
SF1-209ENST00000433274 SUPT6HQ7KZ85 1726 aaKnown RBP22.66■■□□□ 1.22
SF1-209ENST00000433274 FGD6Q6ZV73 1430 aa22.64■■□□□ 1.21
SF1-209ENST00000433274 PLB1Q6P1J6 1458 aa22.63■■□□□ 1.21
SF1-209ENST00000433274 PRG4Q92954 1404 aaPredicted RBP22.61■■□□□ 1.21
SF1-209ENST00000433274 MYOM3Q5VTT5 1437 aa22.6■■□□□ 1.21
SF1-209ENST00000433274 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.58■■□□□ 1.21
SF1-209ENST00000433274 ARHGEF11O15085 1522 aa22.58■■□□□ 1.21
SF1-209ENST00000433274 CDK11AQ9UQ88 783 aaPredicted RBP22.54■■□□□ 1.2
SF1-209ENST00000433274 DHX57Q6P158 1386 aaKnown RBP22.51■■□□□ 1.19
SF1-209ENST00000433274 RAB3GAP2Q9H2M9 1393 aa22.51■■□□□ 1.19
SF1-209ENST00000433274 SHROOM2Q13796 1616 aa22.5■■□□□ 1.19
SF1-209ENST00000433274 ABCA8O94911 1581 aa22.5■■□□□ 1.19
SF1-209ENST00000433274 PTPRGP23470 1445 aa22.5■■□□□ 1.19
SF1-209ENST00000433274 SETD5Q9C0A6 1442 aa22.49■■□□□ 1.19
SF1-209ENST00000433274 PTPN23Q9H3S7 1636 aa22.48■■□□□ 1.19
SF1-209ENST00000433274 TROQ12816 1431 aaPredicted RBP22.45■■□□□ 1.18
SF1-209ENST00000433274 CLASP1Q7Z460 1538 aa22.43■■□□□ 1.18
SF1-209ENST00000433274 ERCC6L2Q5T890 1561 aa22.43■■□□□ 1.18
SF1-209ENST00000433274 PTPRKQ15262 1439 aa22.42■■□□□ 1.18
SF1-209ENST00000433274 MIA2Q96PC5 1412 aa22.42■■□□□ 1.18
SF1-209ENST00000433274 TCOF1Q13428 1488 aaKnown RBP22.42■■□□□ 1.18
SF1-209ENST00000433274 ATP10BO94823 1461 aa22.41■■□□□ 1.18
SF1-209ENST00000433274 CLSPNQ9HAW4 1339 aa22.4■■□□□ 1.18
SF1-209ENST00000433274 PLEKHD1A6NEE1 506 aa22.37■■□□□ 1.17
SF1-209ENST00000433274 UACAQ9BZF9 1416 aa22.36■■□□□ 1.17
SF1-209ENST00000433274 KIF14Q15058 1648 aa22.35■■□□□ 1.17
SF1-209ENST00000433274 ADCY10Q96PN6 1610 aa22.33■■□□□ 1.16
SF1-209ENST00000433274 HFM1A2PYH4 1435 aa22.32■■□□□ 1.16
SF1-209ENST00000433274 CHIC2Q9UKJ5 165 aa22.31■■□□□ 1.16
SF1-209ENST00000433274 ZNF644Q9H582 1327 aaPredicted RBP22.3■■□□□ 1.16
SF1-209ENST00000433274 CFDP1Q9UEE9 299 aaPredicted RBP22.29■■□□□ 1.16
SF1-209ENST00000433274 GPATCH8Q9UKJ3 1502 aaKnown RBP22.28■■□□□ 1.16
SF1-209ENST00000433274 NAIPQ13075 1403 aa22.28■■□□□ 1.16
SF1-209ENST00000433274 ABCC2Q92887 1545 aa22.26■■□□□ 1.15
SF1-209ENST00000433274 RRP7BPQ9NSQ0 103 aa22.26■■□□□ 1.15
SF1-209ENST00000433274 ITSN2Q9NZM3 1697 aa22.26■■□□□ 1.15
SF1-209ENST00000433274 MAPKBP1O60336 1514 aa22.25■■□□□ 1.15
SF1-209ENST00000433274 ZNF777Q9ULD5 760 aaPredicted RBP22.23■■□□□ 1.15
SF1-209ENST00000433274 ABCC10Q5T3U5 1492 aa22.23■■□□□ 1.15
SF1-209ENST00000433274 DAPK1P53355 1430 aa22.23■■□□□ 1.15
SF1-209ENST00000433274 CAMSAP2Q08AD1 1489 aa22.22■■□□□ 1.15
SF1-209ENST00000433274 ABCC5O15440 1437 aa22.2■■□□□ 1.14
SF1-209ENST00000433274 DNMT1P26358 1616 aaKnown RBP22.2■■□□□ 1.14
SF1-209ENST00000433274 AKNAQ7Z591 1439 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms