RNA–Protein interactions for RNA: ENST00000427332.6

HDAC7-209, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HDAC7, Length 3,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-209ENST00000427332 KANK4Q5T7N3 995 aaPredicted RBP21.82■■□□□ 1.08
HDAC7-209ENST00000427332 FHOD3Q2V2M9 1422 aa21.8■■□□□ 1.08
HDAC7-209ENST00000427332 CHMP7Q8WUX9 453 aaPredicted RBP21.79■■□□□ 1.08
HDAC7-209ENST00000427332 ARID3CA6NKF2 412 aa21.79■■□□□ 1.08
HDAC7-209ENST00000427332 GRIN2BQ13224 1484 aa21.78■■□□□ 1.08
HDAC7-209ENST00000427332 CUL7Q14999 1698 aa21.76■■□□□ 1.07
HDAC7-209ENST00000427332 SNAPC4Q5SXM2 1469 aa21.75■■□□□ 1.07
HDAC7-209ENST00000427332 HNRNPUL2Q1KMD3 747 aaKnown RBP21.74■■□□□ 1.07
HDAC7-209ENST00000427332 FHAD1B1AJZ9 1412 aa21.72■■□□□ 1.07
HDAC7-209ENST00000427332 EIF4G3O43432 1585 aaKnown RBP21.71■■□□□ 1.07
HDAC7-209ENST00000427332 PBRM1Q86U86 1689 aa21.7■■□□□ 1.07
HDAC7-209ENST00000427332 HRCP23327 699 aa21.7■■□□□ 1.06
HDAC7-209ENST00000427332 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
HDAC7-209ENST00000427332 ITGAEP38570 1179 aa21.63■■□□□ 1.05
HDAC7-209ENST00000427332 ADAMTS12P58397 1594 aa21.63■■□□□ 1.05
HDAC7-209ENST00000427332 CTTNBP2Q8WZ74 1663 aa21.57■■□□□ 1.04
HDAC7-209ENST00000427332 GRIN2AQ12879 1464 aa21.55■■□□□ 1.04
HDAC7-209ENST00000427332 CCER1Q8TC90 406 aaPredicted RBP21.52■■□□□ 1.04
HDAC7-209ENST00000427332 PCF11O94913 1555 aaKnown RBP21.5■■□□□ 1.03
HDAC7-209ENST00000427332 SYNJ2O15056 1496 aa21.48■■□□□ 1.03
HDAC7-209ENST00000427332 IQGAP2Q13576 1575 aa21.48■■□□□ 1.03
HDAC7-209ENST00000427332 MAGI1Q96QZ7 1491 aaPredicted RBP21.48■■□□□ 1.03
HDAC7-209ENST00000427332 JPH4Q96JJ6 628 aa21.47■■□□□ 1.03
HDAC7-209ENST00000427332 EFCAB5A4FU69 1503 aa21.45■■□□□ 1.02
HDAC7-209ENST00000427332 FMN1Q68DA7 1419 aa21.44■■□□□ 1.02
HDAC7-209ENST00000427332 FAM50AQ14320 339 aaKnown RBP21.44■■□□□ 1.02
HDAC7-209ENST00000427332 KIAA0586Q9BVV6 1533 aa21.42■■□□□ 1.02
HDAC7-209ENST00000427332 CEP170Q5SW79 1584 aa21.4■■□□□ 1.02
HDAC7-209ENST00000427332 CASKIN1Q8WXD9 1431 aa21.39■■□□□ 1.01
HDAC7-209ENST00000427332 TIAM1Q13009 1591 aa21.38■■□□□ 1.01
HDAC7-209ENST00000427332 MTUS2Q5JR59 1369 aa21.38■■□□□ 1.01
HDAC7-209ENST00000427332 SAMD9Q5K651 1589 aa21.37■■□□□ 1.01
HDAC7-209ENST00000427332 LRRC9Q6ZRR7 1453 aa21.36■■□□□ 1.01
HDAC7-209ENST00000427332 PHLDB1Q86UU1 1377 aa21.36■■□□□ 1.01
HDAC7-209ENST00000427332 FYCO1Q9BQS8 1478 aa21.34■■□□□ 1.01
HDAC7-209ENST00000427332 DISP1Q96F81 1524 aa21.32■■□□□ 1
HDAC7-209ENST00000427332 CCNB3Q8WWL7 1395 aa21.3■■□□□ 1
HDAC7-209ENST00000427332 NUP160Q12769 1436 aa21.28■■□□□ 1
HDAC7-209ENST00000427332 CDK13Q14004 1512 aaKnown RBP21.28■■□□□ 1
HDAC7-209ENST00000427332 UGGT2Q9NYU1 1516 aa21.27■■□□□ 1
HDAC7-209ENST00000427332 PLB1Q6P1J6 1458 aa21.25■□□□□ 0.99
HDAC7-209ENST00000427332 PRG4Q92954 1404 aaPredicted RBP21.24■□□□□ 0.99
HDAC7-209ENST00000427332 KIAA0556O60303 1618 aa21.24■□□□□ 0.99
HDAC7-209ENST00000427332 CARMIL2Q6F5E8 1435 aa21.22■□□□□ 0.99
HDAC7-209ENST00000427332 CHD1O14646 1710 aa21.21■□□□□ 0.99
HDAC7-209ENST00000427332 LRRIQ1Q96JM4 1722 aa21.19■□□□□ 0.98
HDAC7-209ENST00000427332 EPRSP07814 1512 aaKnown RBP21.19■□□□□ 0.98
HDAC7-209ENST00000427332 RRBP1Q9P2E9 1410 aaKnown RBP21.18■□□□□ 0.98
HDAC7-209ENST00000427332 MAP3K1Q13233 1512 aa21.17■□□□□ 0.98
HDAC7-209ENST00000427332 CFAP43Q8NDM7 1665 aa21.17■□□□□ 0.98
HDAC7-209ENST00000427332 MAGI3Q5TCQ9 1506 aa21.16■□□□□ 0.98
HDAC7-209ENST00000427332 ZEB1P37275 1124 aaPredicted RBP21.14■□□□□ 0.98
HDAC7-209ENST00000427332 CHIC2Q9UKJ5 165 aa21.13■□□□□ 0.97
HDAC7-209ENST00000427332 NUP153P49790 1475 aaKnown RBP21.13■□□□□ 0.97
HDAC7-209ENST00000427332 NCOA2Q15596 1464 aa21.13■□□□□ 0.97
HDAC7-209ENST00000427332 PTPRGP23470 1445 aa21.12■□□□□ 0.97
HDAC7-209ENST00000427332 HECW1Q76N89 1606 aa21.11■□□□□ 0.97
HDAC7-209ENST00000427332 ZNF777Q9ULD5 760 aaPredicted RBP21.1■□□□□ 0.97
HDAC7-209ENST00000427332 ERCC6L2Q5T890 1561 aa21.1■□□□□ 0.97
HDAC7-209ENST00000427332 CDK11AQ9UQ88 783 aaPredicted RBP21.08■□□□□ 0.96
HDAC7-209ENST00000427332 CCDC18Q5T9S5 1454 aa21.06■□□□□ 0.96
HDAC7-209ENST00000427332 ZNF644Q9H582 1327 aaPredicted RBP21.06■□□□□ 0.96
HDAC7-209ENST00000427332 FGD6Q6ZV73 1430 aa21.06■□□□□ 0.96
HDAC7-209ENST00000427332 RAPGEF6Q8TEU7 1601 aa21.05■□□□□ 0.96
HDAC7-209ENST00000427332 PLEKHD1A6NEE1 506 aa21.03■□□□□ 0.96
HDAC7-209ENST00000427332 KCNH8Q96L42 1107 aa21.02■□□□□ 0.96
HDAC7-209ENST00000427332 RRP7BPQ9NSQ0 103 aa21.02■□□□□ 0.96
HDAC7-209ENST00000427332 MYOM3Q5VTT5 1437 aa21.01■□□□□ 0.95
HDAC7-209ENST00000427332 EHBP1L1Q8N3D4 1523 aa21■□□□□ 0.95
HDAC7-209ENST00000427332 RAB3GAP2Q9H2M9 1393 aa21■□□□□ 0.95
HDAC7-209ENST00000427332 OSCARQ8IYS5 282 aa20.97■□□□□ 0.95
HDAC7-209ENST00000427332 SUPT6HQ7KZ85 1726 aaKnown RBP20.97■□□□□ 0.95
HDAC7-209ENST00000427332 CFDP1Q9UEE9 299 aaPredicted RBP20.96■□□□□ 0.95
HDAC7-209ENST00000427332 PTPRKQ15262 1439 aa20.95■□□□□ 0.94
HDAC7-209ENST00000427332 ATP10BO94823 1461 aa20.95■□□□□ 0.94
HDAC7-209ENST00000427332 DHX57Q6P158 1386 aaKnown RBP20.91■□□□□ 0.94
HDAC7-209ENST00000427332 TROQ12816 1431 aaPredicted RBP20.9■□□□□ 0.94
HDAC7-209ENST00000427332 UACAQ9BZF9 1416 aa20.9■□□□□ 0.94
HDAC7-209ENST00000427332 SETD5Q9C0A6 1442 aa20.9■□□□□ 0.94
HDAC7-209ENST00000427332 ABCA8O94911 1581 aa20.87■□□□□ 0.93
HDAC7-209ENST00000427332 NEUROD1Q13562 356 aa20.87■□□□□ 0.93
HDAC7-209ENST00000427332 KIF14Q15058 1648 aa20.86■□□□□ 0.93
HDAC7-209ENST00000427332 PTPN23Q9H3S7 1636 aa20.85■□□□□ 0.93
HDAC7-209ENST00000427332 CLASP1Q7Z460 1538 aa20.84■□□□□ 0.93
HDAC7-209ENST00000427332 ARHGEF11O15085 1522 aa20.83■□□□□ 0.92
HDAC7-209ENST00000427332 TRIM52Q96A61 297 aa20.83■□□□□ 0.92
HDAC7-209ENST00000427332 SIN3AQ96ST3 1273 aa20.82■□□□□ 0.92
HDAC7-209ENST00000427332 SHROOM2Q13796 1616 aa20.81■□□□□ 0.92
HDAC7-209ENST00000427332 HNRNPMP52272 730 aaKnown RBP eCLIP20.79■□□□□ 0.922e-6■■■□□ 16.7
HDAC7-209ENST00000427332 GPATCH8Q9UKJ3 1502 aaKnown RBP20.77■□□□□ 0.92
HDAC7-209ENST00000427332 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.75■□□□□ 0.913e-16■□□□□ 8.2
HDAC7-209ENST00000427332 MIA2Q96PC5 1412 aa20.74■□□□□ 0.91
HDAC7-209ENST00000427332 FOXD1Q16676 465 aa20.73■□□□□ 0.91
HDAC7-209ENST00000427332 NAIPQ13075 1403 aa20.72■□□□□ 0.91
HDAC7-209ENST00000427332 ABCC2Q92887 1545 aa20.71■□□□□ 0.91
HDAC7-209ENST00000427332 CYB5RLQ6IPT4 315 aa20.71■□□□□ 0.91
HDAC7-209ENST00000427332 ABCC5O15440 1437 aa20.7■□□□□ 0.9
HDAC7-209ENST00000427332 CAMSAP2Q08AD1 1489 aa20.69■□□□□ 0.9
HDAC7-209ENST00000427332 DAPK1P53355 1430 aa20.69■□□□□ 0.9
HDAC7-209ENST00000427332 HFM1A2PYH4 1435 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms