RNA–Protein interactions for RNA: ENST00000427332.6

HDAC7-209, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HDAC7, Length 3,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-209ENST00000427332 NISCHQ9Y2I1 1504 aa31.3■■■□□ 2.6
HDAC7-209ENST00000427332 CCDC180Q9P1Z9 1646 aa26.86■■□□□ 1.89
HDAC7-209ENST00000427332 DCAF8L2P0C7V8 631 aa26.75■■□□□ 1.87
HDAC7-209ENST00000427332 SHROOM4Q9ULL8 1493 aa26.41■■□□□ 1.82
HDAC7-209ENST00000427332 ZCCHC6Q5VYS8 1495 aaKnown RBP26.25■■□□□ 1.79
HDAC7-209ENST00000427332 ABCC9O60706 1549 aa26.09■■□□□ 1.77
HDAC7-209ENST00000427332 DCAF1Q9Y4B6 1507 aa25.51■■□□□ 1.67
HDAC7-209ENST00000427332 SUPT5HO00267 1087 aaKnown RBP25.48■■□□□ 1.67
HDAC7-209ENST00000427332 SCRIBQ14160 1630 aa25.32■■□□□ 1.64
HDAC7-209ENST00000427332 NACADO15069 1562 aa25.15■■□□□ 1.62
HDAC7-209ENST00000427332 MYO15BQ96JP2 1530 aa25.08■■□□□ 1.61
HDAC7-209ENST00000427332 RB1CC1Q8TDY2 1594 aa25.01■■□□□ 1.59
HDAC7-209ENST00000427332 PABPN1Q86U42 306 aaKnown RBP eCLIP24.88■■□□□ 1.57
HDAC7-209ENST00000427332 CECR2Q9BXF3 1484 aa24.61■■□□□ 1.53
HDAC7-209ENST00000427332 UNC13AQ9UPW8 1703 aa24.51■■□□□ 1.51
HDAC7-209ENST00000427332 RSF1Q96T23 1441 aaPredicted RBP24.48■■□□□ 1.51
HDAC7-209ENST00000427332 MROH2BQ7Z745 1585 aa24.36■■□□□ 1.49
HDAC7-209ENST00000427332 BICRAQ9NZM4 1560 aa24.33■■□□□ 1.49
HDAC7-209ENST00000427332 WIZO95785 1651 aa24.16■■□□□ 1.46
HDAC7-209ENST00000427332 CHIC1Q5VXU3 224 aa24.11■■□□□ 1.45
HDAC7-209ENST00000427332 BAZ1AQ9NRL2 1556 aaPredicted RBP24.1■■□□□ 1.45
HDAC7-209ENST00000427332 SMARCA4P51532 1647 aa24.01■■□□□ 1.43
HDAC7-209ENST00000427332 TRIM41Q8WV44 630 aa23.7■■□□□ 1.38
HDAC7-209ENST00000427332 ATAD2BQ9ULI0 1458 aa23.69■■□□□ 1.38
HDAC7-209ENST00000427332 TOP2AP11388 1531 aaKnown RBP23.68■■□□□ 1.38
HDAC7-209ENST00000427332 CCDC88BA6NC98 1476 aa23.67■■□□□ 1.38
HDAC7-209ENST00000427332 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
HDAC7-209ENST00000427332 FAM9AQ8IZU1 332 aaPredicted RBP23.65■■□□□ 1.38
HDAC7-209ENST00000427332 EHMT2Q96KQ7 1210 aa23.62■■□□□ 1.37
HDAC7-209ENST00000427332 BAZ1BQ9UIG0 1483 aaKnown RBP23.62■■□□□ 1.37
HDAC7-209ENST00000427332 SMARCA2P51531 1590 aa23.55■■□□□ 1.36
HDAC7-209ENST00000427332 LOC105371045A0A1W2PR82 267 aa23.52■■□□□ 1.36
HDAC7-209ENST00000427332 PEG3Q9GZU2 1588 aa23.46■■□□□ 1.35
HDAC7-209ENST00000427332 ABCC8Q09428 1581 aa23.38■■□□□ 1.33
HDAC7-209ENST00000427332 NCAPD3P42695 1498 aa23.34■■□□□ 1.33
HDAC7-209ENST00000427332 CC2D2AQ9P2K1 1620 aa23.32■■□□□ 1.32
HDAC7-209ENST00000427332 DNAJC5BQ9UF47 199 aa23.3■■□□□ 1.32
HDAC7-209ENST00000427332 HMGXB3Q12766 1538 aa23.18■■□□□ 1.3
HDAC7-209ENST00000427332 WRNQ14191 1432 aaPredicted RBP eCLIP23.06■■□□□ 1.285e-6■■■■■ 29.2
HDAC7-209ENST00000427332 SOGA1O94964 1423 aa23■■□□□ 1.27
HDAC7-209ENST00000427332 RUSC2Q8N2Y8 1516 aa22.94■■□□□ 1.26
HDAC7-209ENST00000427332 NESP48681 1621 aa22.92■■□□□ 1.26
HDAC7-209ENST00000427332 SYNJ1O43426 1573 aa22.92■■□□□ 1.26
HDAC7-209ENST00000427332 CADPSQ9ULU8 1353 aa22.91■■□□□ 1.26
HDAC7-209ENST00000427332 CFTRP13569 1480 aa22.91■■□□□ 1.26
HDAC7-209ENST00000427332 CSRNP3Q8WYN3 585 aa22.79■■□□□ 1.24
HDAC7-209ENST00000427332 RANGAP1P46060 587 aaPredicted RBP22.79■■□□□ 1.24
HDAC7-209ENST00000427332 UBTFP17480 764 aaKnown RBP22.78■■□□□ 1.24
HDAC7-209ENST00000427332 CUX1P39880 1505 aa22.72■■□□□ 1.23
HDAC7-209ENST00000427332 FANCD2Q9BXW9 1451 aa22.7■■□□□ 1.22
HDAC7-209ENST00000427332 PPARGC1BQ86YN6 1023 aaKnown RBP22.68■■□□□ 1.22
HDAC7-209ENST00000427332 TOP2BQ02880 1626 aa22.63■■□□□ 1.21
HDAC7-209ENST00000427332 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
HDAC7-209ENST00000427332 PCGF6Q9BYE7 350 aa22.57■■□□□ 1.2
HDAC7-209ENST00000427332 FGD5Q6ZNL6 1462 aa22.51■■□□□ 1.19
HDAC7-209ENST00000427332 EEA1Q15075 1411 aa22.5■■□□□ 1.19
HDAC7-209ENST00000427332 BIVM-ERCC5R4GMW8 1640 aa22.5■■□□□ 1.19
HDAC7-209ENST00000427332 CEP164Q9UPV0 1460 aa22.49■■□□□ 1.19
HDAC7-209ENST00000427332 RAD54L2Q9Y4B4 1467 aa22.48■■□□□ 1.19
HDAC7-209ENST00000427332 PDS5BQ9NTI5 1447 aa22.47■■□□□ 1.19
HDAC7-209ENST00000427332 CUX2O14529 1486 aa22.47■■□□□ 1.19
HDAC7-209ENST00000427332 LAMC3Q9Y6N6 1575 aa22.45■■□□□ 1.18
HDAC7-209ENST00000427332 RAPGEF2Q9Y4G8 1499 aa22.44■■□□□ 1.18
HDAC7-209ENST00000427332 PRDM2Q13029 1718 aa22.44■■□□□ 1.18
HDAC7-209ENST00000427332 KIF27Q86VH2 1401 aa22.42■■□□□ 1.18
HDAC7-209ENST00000427332 TOPBP1Q92547 1522 aa22.41■■□□□ 1.18
HDAC7-209ENST00000427332 GOLGA3Q08378 1498 aa22.4■■□□□ 1.18
HDAC7-209ENST00000427332 CEP162Q5TB80 1403 aa22.4■■□□□ 1.18
HDAC7-209ENST00000427332 URB2Q14146 1524 aaKnown RBP22.39■■□□□ 1.17
HDAC7-209ENST00000427332 POLA1P09884 1462 aaPredicted RBP22.36■■□□□ 1.17
HDAC7-209ENST00000427332 TNIKQ9UKE5 1360 aa22.35■■□□□ 1.17
HDAC7-209ENST00000427332 KIF21AQ7Z4S6 1674 aa22.35■■□□□ 1.17
HDAC7-209ENST00000427332 TDRD9Q8NDG6 1382 aaKnown RBP22.35■■□□□ 1.17
HDAC7-209ENST00000427332 DNMBPQ6XZF7 1577 aa22.31■■□□□ 1.16
HDAC7-209ENST00000427332 ERCC6Q03468 1493 aa22.29■■□□□ 1.16
HDAC7-209ENST00000427332 IGF1RP08069 1367 aa22.29■■□□□ 1.16
HDAC7-209ENST00000427332 CARMIL1Q5VZK9 1371 aa22.21■■□□□ 1.15
HDAC7-209ENST00000427332 PRXQ9BXM0 1461 aa22.21■■□□□ 1.15
HDAC7-209ENST00000427332 CLIP1P30622 1438 aa22.2■■□□□ 1.15
HDAC7-209ENST00000427332 KIF21BO75037 1637 aa22.2■■□□□ 1.14
HDAC7-209ENST00000427332 TRIM26Q12899 539 aaPredicted RBP22.17■■□□□ 1.14
HDAC7-209ENST00000427332 P3H3Q8IVL6 736 aa22.16■■□□□ 1.14
HDAC7-209ENST00000427332 MRC2Q9UBG0 1479 aa22.13■■□□□ 1.13
HDAC7-209ENST00000427332 ABCA10Q8WWZ4 1543 aa22.12■■□□□ 1.13
HDAC7-209ENST00000427332 AQRO60306 1485 aaKnown RBP eCLIP22.12■■□□□ 1.135e-7■■■■■ 29
HDAC7-209ENST00000427332 GAPVD1Q14C86 1478 aa22.05■■□□□ 1.12
HDAC7-209ENST00000427332 ATP1B4Q9UN42 357 aaPredicted RBP22.03■■□□□ 1.12
HDAC7-209ENST00000427332 ZNF608Q9ULD9 1512 aaPredicted RBP22.02■■□□□ 1.12
HDAC7-209ENST00000427332 ERICH3Q5RHP9 1530 aa22.02■■□□□ 1.12
HDAC7-209ENST00000427332 APLP2Q06481 763 aa22.01■■□□□ 1.11
HDAC7-209ENST00000427332 FBLN2P98095 1184 aa22■■□□□ 1.11
HDAC7-209ENST00000427332 TARBP1Q13395 1621 aaKnown RBP21.93■■□□□ 1.1
HDAC7-209ENST00000427332 ARAP1Q96P48 1450 aa21.91■■□□□ 1.1
HDAC7-209ENST00000427332 VPS8Q8N3P4 1428 aa21.9■■□□□ 1.1
HDAC7-209ENST00000427332 WDR62O43379 1518 aa21.9■■□□□ 1.1
HDAC7-209ENST00000427332 WDR97A6NE52 1622 aa21.87■■□□□ 1.09
HDAC7-209ENST00000427332 ARHGAP35Q9NRY4 1499 aa21.87■■□□□ 1.09
HDAC7-209ENST00000427332 ABCA5Q8WWZ7 1642 aa21.87■■□□□ 1.09
HDAC7-209ENST00000427332 IFT140Q96RY7 1462 aa21.84■■□□□ 1.09
HDAC7-209ENST00000427332 THOC2Q8NI27 1593 aaKnown RBP21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms