RNA–Protein interactions for RNA: ENST00000416774.1

LINC01342-201, Transcript of long intergenic non-protein coding RNA 1342, humanhuman

TSL 1 (best) BASIC

Gene LINC01342, Length 1,620 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01342-201ENST00000416774 CHD1O14646 1710 aa36.8■■■■□ 3.48
LINC01342-201ENST00000416774 VPS8Q8N3P4 1428 aa36.79■■■■□ 3.48
LINC01342-201ENST00000416774 SYNJ2O15056 1496 aa36.78■■■■□ 3.48
LINC01342-201ENST00000416774 ADAMTS12P58397 1594 aa36.7■■■■□ 3.47
LINC01342-201ENST00000416774 FHAD1B1AJZ9 1412 aa36.68■■■■□ 3.46
LINC01342-201ENST00000416774 ARAP1Q96P48 1450 aa36.6■■■■□ 3.45
LINC01342-201ENST00000416774 GRIN2AQ12879 1464 aa36.57■■■■□ 3.44
LINC01342-201ENST00000416774 ARHGAP35Q9NRY4 1499 aa36.52■■■■□ 3.44
LINC01342-201ENST00000416774 HRCP23327 699 aa36.51■■■■□ 3.43
LINC01342-201ENST00000416774 PPARGC1BQ86YN6 1023 aaKnown RBP36.51■■■■□ 3.43
LINC01342-201ENST00000416774 CTTNBP2Q8WZ74 1663 aa36.46■■■■□ 3.43
LINC01342-201ENST00000416774 RANGAP1P46060 587 aaPredicted RBP36.46■■■■□ 3.43
LINC01342-201ENST00000416774 APLP2Q06481 763 aa36.41■■■■□ 3.42
LINC01342-201ENST00000416774 CLASP1Q7Z460 1538 aa36.41■■■■□ 3.42
LINC01342-201ENST00000416774 NUP160Q12769 1436 aa36.39■■■■□ 3.42
LINC01342-201ENST00000416774 CEP170Q5SW79 1584 aa36.38■■■■□ 3.41
LINC01342-201ENST00000416774 EFCAB5A4FU69 1503 aa36.34■■■■□ 3.41
LINC01342-201ENST00000416774 ARHGEF11O15085 1522 aa36.23■■■■□ 3.39
LINC01342-201ENST00000416774 RIMBP3CA6NJZ7 1639 aa36.2■■■■□ 3.39
LINC01342-201ENST00000416774 RIMBP3BA6NNM3 1639 aa36.2■■■■□ 3.39
LINC01342-201ENST00000416774 RIMBP3Q9UFD9 1639 aa36.2■■■■□ 3.39
LINC01342-201ENST00000416774 MAP3K1Q13233 1512 aa36.18■■■■□ 3.38
LINC01342-201ENST00000416774 KIAA0586Q9BVV6 1533 aa36.12■■■■□ 3.37
LINC01342-201ENST00000416774 TTBK1Q5TCY1 1321 aaPredicted RBP36.1■■■■□ 3.37
LINC01342-201ENST00000416774 SAMD9Q5K651 1589 aa36.1■■■■□ 3.37
LINC01342-201ENST00000416774 JPH4Q96JJ6 628 aa36.08■■■■□ 3.37
LINC01342-201ENST00000416774 SHROOM2Q13796 1616 aa36.06■■■■□ 3.36
LINC01342-201ENST00000416774 ZEB1P37275 1124 aaPredicted RBP36.01■■■■□ 3.35
LINC01342-201ENST00000416774 TIAM1Q13009 1591 aa35.99■■■■□ 3.35
LINC01342-201ENST00000416774 FMN1Q68DA7 1419 aa35.99■■■■□ 3.35
LINC01342-201ENST00000416774 FHOD3Q2V2M9 1422 aa35.99■■■■□ 3.35
LINC01342-201ENST00000416774 PRG4Q92954 1404 aaPredicted RBP35.98■■■■□ 3.35
LINC01342-201ENST00000416774 ERCC6L2Q5T890 1561 aa35.98■■■■□ 3.35
LINC01342-201ENST00000416774 FYCO1Q9BQS8 1478 aa35.97■■■■□ 3.35
LINC01342-201ENST00000416774 IQGAP2Q13576 1575 aa35.97■■■■□ 3.35
LINC01342-201ENST00000416774 CYB5RLQ6IPT4 315 aa35.95■■■■□ 3.35
LINC01342-201ENST00000416774 CASKIN1Q8WXD9 1431 aa35.95■■■■□ 3.35
LINC01342-201ENST00000416774 PCF11O94913 1555 aaKnown RBP35.95■■■■□ 3.35
LINC01342-201ENST00000416774 CFAP43Q8NDM7 1665 aa35.92■■■■□ 3.34
LINC01342-201ENST00000416774 KANK4Q5T7N3 995 aaPredicted RBP35.92■■■■□ 3.34
LINC01342-201ENST00000416774 P3H3Q8IVL6 736 aa35.89■■■■□ 3.34
LINC01342-201ENST00000416774 UGGT2Q9NYU1 1516 aa35.84■■■■□ 3.33
LINC01342-201ENST00000416774 LRRC9Q6ZRR7 1453 aa35.81■■■■□ 3.32
LINC01342-201ENST00000416774 RRBP1Q9P2E9 1410 aaKnown RBP35.78■■■■□ 3.32
LINC01342-201ENST00000416774 CARMIL2Q6F5E8 1435 aa35.74■■■■□ 3.31
LINC01342-201ENST00000416774 DISP1Q96F81 1524 aa35.69■■■■□ 3.3
LINC01342-201ENST00000416774 KIAA0556O60303 1618 aa35.6■■■■□ 3.29
LINC01342-201ENST00000416774 CCNB3Q8WWL7 1395 aa35.59■■■■□ 3.29
LINC01342-201ENST00000416774 PTPRGP23470 1445 aa35.58■■■■□ 3.29
LINC01342-201ENST00000416774 ATP1B4Q9UN42 357 aaPredicted RBP35.57■■■■□ 3.29
LINC01342-201ENST00000416774 LRRIQ1Q96JM4 1722 aa35.56■■■■□ 3.28
LINC01342-201ENST00000416774 CCDC18Q5T9S5 1454 aa35.56■■■■□ 3.28
LINC01342-201ENST00000416774 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.56■■■■□ 3.28
LINC01342-201ENST00000416774 CCER1Q8TC90 406 aaPredicted RBP35.56■■■■□ 3.28
LINC01342-201ENST00000416774 HECW1Q76N89 1606 aa35.56■■■■□ 3.28
LINC01342-201ENST00000416774 HNRNPUL2Q1KMD3 747 aaKnown RBP35.54■■■■□ 3.28
LINC01342-201ENST00000416774 PHLDB1Q86UU1 1377 aa35.45■■■■□ 3.26
LINC01342-201ENST00000416774 EHBP1L1Q8N3D4 1523 aa35.43■■■■□ 3.26
LINC01342-201ENST00000416774 MTUS2Q5JR59 1369 aa35.41■■■■□ 3.26
LINC01342-201ENST00000416774 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.4■■■■□ 3.261e-7■■■■□ 25.3
LINC01342-201ENST00000416774 EPRSP07814 1512 aaKnown RBP35.37■■■■□ 3.25
LINC01342-201ENST00000416774 ADCY10Q96PN6 1610 aa35.37■■■■□ 3.25
LINC01342-201ENST00000416774 SUPT6HQ7KZ85 1726 aaKnown RBP35.36■■■■□ 3.25
LINC01342-201ENST00000416774 UACAQ9BZF9 1416 aa35.33■■■■□ 3.25
LINC01342-201ENST00000416774 RAPGEF6Q8TEU7 1601 aa35.32■■■■□ 3.24
LINC01342-201ENST00000416774 NPM1P06748 294 aaKnown RBP eCLIP35.3■■■■□ 3.24
LINC01342-201ENST00000416774 UHRF1BP1LA0JNW5 1464 aa35.26■■■■□ 3.24
LINC01342-201ENST00000416774 NCOA2Q15596 1464 aa35.26■■■■□ 3.24
LINC01342-201ENST00000416774 PLB1Q6P1J6 1458 aa35.26■■■■□ 3.24
LINC01342-201ENST00000416774 ABCC2Q92887 1545 aa35.25■■■■□ 3.23
LINC01342-201ENST00000416774 MAGI3Q5TCQ9 1506 aa35.23■■■■□ 3.23
LINC01342-201ENST00000416774 FGD6Q6ZV73 1430 aa35.22■■■■□ 3.23
LINC01342-201ENST00000416774 NUP153P49790 1475 aaKnown RBP35.2■■■■□ 3.23
LINC01342-201ENST00000416774 ABCA8O94911 1581 aa35.19■■■■□ 3.22
LINC01342-201ENST00000416774 MYOM3Q5VTT5 1437 aa35.19■■■■□ 3.22
LINC01342-201ENST00000416774 CDK13Q14004 1512 aaKnown RBP35.17■■■■□ 3.22
LINC01342-201ENST00000416774 TRHP20396 242 aaPredicted RBP35.16■■■■□ 3.22
LINC01342-201ENST00000416774 CLSPNQ9HAW4 1339 aa35.13■■■■□ 3.21
LINC01342-201ENST00000416774 FAM50AQ14320 339 aaKnown RBP35.11■■■■□ 3.21
LINC01342-201ENST00000416774 KDM5BQ9UGL1 1544 aa35.1■■■■□ 3.21
LINC01342-201ENST00000416774 MAPKBP1O60336 1514 aa35.08■■■■□ 3.21
LINC01342-201ENST00000416774 CDK11AQ9UQ88 783 aaPredicted RBP35.07■■■■□ 3.21
LINC01342-201ENST00000416774 ZCCHC11Q5TAX3 1644 aaKnown RBP35.03■■■■□ 3.2
LINC01342-201ENST00000416774 ARID3CA6NKF2 412 aa35.03■■■■□ 3.2
LINC01342-201ENST00000416774 ITGAEP38570 1179 aa35.03■■■■□ 3.2
LINC01342-201ENST00000416774 SETD5Q9C0A6 1442 aa35.02■■■■□ 3.2
LINC01342-201ENST00000416774 DHX57Q6P158 1386 aaKnown RBP35.02■■■■□ 3.2
LINC01342-201ENST00000416774 MIA2Q96PC5 1412 aa35.02■■■■□ 3.2
LINC01342-201ENST00000416774 TCOF1Q13428 1488 aaKnown RBP35.02■■■■□ 3.2
LINC01342-201ENST00000416774 PTPN23Q9H3S7 1636 aa35.01■■■■□ 3.2
LINC01342-201ENST00000416774 ASXL2Q76L83 1435 aa34.97■■■■□ 3.19
LINC01342-201ENST00000416774 RAB3GAP2Q9H2M9 1393 aa34.94■■■■□ 3.18
LINC01342-201ENST00000416774 ATP10BO94823 1461 aa34.94■■■■□ 3.18
LINC01342-201ENST00000416774 TROQ12816 1431 aaPredicted RBP34.94■■■■□ 3.18
LINC01342-201ENST00000416774 ABCC10Q5T3U5 1492 aa34.91■■■■□ 3.18
LINC01342-201ENST00000416774 FAM69CQ0P6D2 419 aa34.88■■■■□ 3.17
LINC01342-201ENST00000416774 DIP2BQ9P265 1576 aa34.84■■■■□ 3.17
LINC01342-201ENST00000416774 WDR7Q9Y4E6 1490 aa34.82■■■■□ 3.16
LINC01342-201ENST00000416774 KIF13AQ9H1H9 1805 aa34.82■■■■□ 3.16
LINC01342-201ENST00000416774 HFM1A2PYH4 1435 aa34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms