RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 ARAP1Q96P48 1450 aa20.46■□□□□ 0.87
CHEK2-210ENST00000416671 CARMIL1Q5VZK9 1371 aa20.45■□□□□ 0.86
CHEK2-210ENST00000416671 MIER1Q8N108 512 aa20.44■□□□□ 0.86
CHEK2-210ENST00000416671 WDR97A6NE52 1622 aa20.42■□□□□ 0.86
CHEK2-210ENST00000416671 TARBP1Q13395 1621 aaKnown RBP20.4■□□□□ 0.86
CHEK2-210ENST00000416671 WDR62O43379 1518 aa20.38■□□□□ 0.85
CHEK2-210ENST00000416671 GAPVD1Q14C86 1478 aa20.36■□□□□ 0.85
CHEK2-210ENST00000416671 KANK4Q5T7N3 995 aaPredicted RBP20.36■□□□□ 0.85
CHEK2-210ENST00000416671 AQRO60306 1485 aaKnown RBP eCLIP20.36■□□□□ 0.851e-11■■■■■ 27.3
CHEK2-210ENST00000416671 ARHGAP35Q9NRY4 1499 aa20.35■□□□□ 0.85
CHEK2-210ENST00000416671 ABCA5Q8WWZ7 1642 aa20.35■□□□□ 0.85
CHEK2-210ENST00000416671 THOC2Q8NI27 1593 aaKnown RBP20.33■□□□□ 0.85
CHEK2-210ENST00000416671 ZNF608Q9ULD9 1512 aaPredicted RBP20.32■□□□□ 0.84
CHEK2-210ENST00000416671 IFT140Q96RY7 1462 aa20.25■□□□□ 0.83
CHEK2-210ENST00000416671 CLSPNQ9HAW4 1339 aa20.24■□□□□ 0.83
CHEK2-210ENST00000416671 P3H3Q8IVL6 736 aa20.24■□□□□ 0.83
CHEK2-210ENST00000416671 CUL7Q14999 1698 aa20.23■□□□□ 0.83
CHEK2-210ENST00000416671 PBRM1Q86U86 1689 aa20.19■□□□□ 0.82
CHEK2-210ENST00000416671 SUPT16HQ9Y5B9 1047 aaKnown RBP20.15■□□□□ 0.82
CHEK2-210ENST00000416671 GRIN2BQ13224 1484 aa20.15■□□□□ 0.82
CHEK2-210ENST00000416671 EIF4G3O43432 1585 aaKnown RBP20.14■□□□□ 0.81
CHEK2-210ENST00000416671 ATP1B4Q9UN42 357 aaPredicted RBP20.13■□□□□ 0.81
CHEK2-210ENST00000416671 FHAD1B1AJZ9 1412 aa20.1■□□□□ 0.81
CHEK2-210ENST00000416671 ITGAEP38570 1179 aa20.09■□□□□ 0.81
CHEK2-210ENST00000416671 ANP32EQ9BTT0 268 aa20.09■□□□□ 0.81
CHEK2-210ENST00000416671 SNAPC4Q5SXM2 1469 aa20.09■□□□□ 0.81
CHEK2-210ENST00000416671 ADAMTS12P58397 1594 aa20.09■□□□□ 0.81
CHEK2-210ENST00000416671 FHOD3Q2V2M9 1422 aa20.08■□□□□ 0.81
CHEK2-210ENST00000416671 CTTNBP2Q8WZ74 1663 aa20.07■□□□□ 0.8
CHEK2-210ENST00000416671 RRBP1Q9P2E9 1410 aaKnown RBP20.05■□□□□ 0.8
CHEK2-210ENST00000416671 TIAM1Q13009 1591 aa20.04■□□□□ 0.8
CHEK2-210ENST00000416671 TSHZ2Q9NRE2 1034 aa20.04■□□□□ 0.8
CHEK2-210ENST00000416671 FBLN2P98095 1184 aa20.03■□□□□ 0.8
CHEK2-210ENST00000416671 CCNB3Q8WWL7 1395 aa20.03■□□□□ 0.8
CHEK2-210ENST00000416671 PCF11O94913 1555 aaKnown RBP20.02■□□□□ 0.8
CHEK2-210ENST00000416671 LRRC9Q6ZRR7 1453 aa19.98■□□□□ 0.79
CHEK2-210ENST00000416671 CHMP7Q8WUX9 453 aaPredicted RBP19.97■□□□□ 0.79
CHEK2-210ENST00000416671 BCL11AQ9H165 835 aa19.96■□□□□ 0.79
CHEK2-210ENST00000416671 DHX57Q6P158 1386 aaKnown RBP19.95■□□□□ 0.78
CHEK2-210ENST00000416671 PHLDB1Q86UU1 1377 aa19.94■□□□□ 0.78
CHEK2-210ENST00000416671 MAP3K1Q13233 1512 aa19.94■□□□□ 0.78
CHEK2-210ENST00000416671 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
CHEK2-210ENST00000416671 EFCAB5A4FU69 1503 aa19.92■□□□□ 0.78
CHEK2-210ENST00000416671 MAGI1Q96QZ7 1491 aaPredicted RBP19.92■□□□□ 0.78
CHEK2-210ENST00000416671 FAM50AQ14320 339 aaKnown RBP19.9■□□□□ 0.78
CHEK2-210ENST00000416671 SYNJ2O15056 1496 aa19.89■□□□□ 0.78
CHEK2-210ENST00000416671 IQGAP2Q13576 1575 aa19.89■□□□□ 0.77
CHEK2-210ENST00000416671 CFAP43Q8NDM7 1665 aa19.89■□□□□ 0.77
CHEK2-210ENST00000416671 SAMD9Q5K651 1589 aa19.87■□□□□ 0.77
CHEK2-210ENST00000416671 FYCO1Q9BQS8 1478 aa19.87■□□□□ 0.77
CHEK2-210ENST00000416671 CASKIN1Q8WXD9 1431 aa19.87■□□□□ 0.77
CHEK2-210ENST00000416671 CEP170Q5SW79 1584 aa19.84■□□□□ 0.77
CHEK2-210ENST00000416671 FMN1Q68DA7 1419 aa19.83■□□□□ 0.77
CHEK2-210ENST00000416671 KIAA0586Q9BVV6 1533 aa19.83■□□□□ 0.76
CHEK2-210ENST00000416671 RAB3GAP2Q9H2M9 1393 aa19.82■□□□□ 0.76
CHEK2-210ENST00000416671 ARID3CA6NKF2 412 aa19.78■□□□□ 0.76
CHEK2-210ENST00000416671 UGGT2Q9NYU1 1516 aa19.76■□□□□ 0.75
CHEK2-210ENST00000416671 LRRIQ1Q96JM4 1722 aa19.76■□□□□ 0.75
CHEK2-210ENST00000416671 MTUS2Q5JR59 1369 aa19.75■□□□□ 0.75
CHEK2-210ENST00000416671 DISP1Q96F81 1524 aa19.75■□□□□ 0.75
CHEK2-210ENST00000416671 NUP160Q12769 1436 aa19.75■□□□□ 0.75
CHEK2-210ENST00000416671 JPH4Q96JJ6 628 aa19.73■□□□□ 0.75
CHEK2-210ENST00000416671 SETD5Q9C0A6 1442 aa19.72■□□□□ 0.75
CHEK2-210ENST00000416671 CHD1O14646 1710 aa19.7■□□□□ 0.74
CHEK2-210ENST00000416671 KIAA0556O60303 1618 aa19.7■□□□□ 0.74
CHEK2-210ENST00000416671 BCANQ96GW7 911 aa19.66■□□□□ 0.74
CHEK2-210ENST00000416671 FGD6Q6ZV73 1430 aa19.66■□□□□ 0.74
CHEK2-210ENST00000416671 MAPKBP1O60336 1514 aa19.66■□□□□ 0.74
CHEK2-210ENST00000416671 NCOA2Q15596 1464 aa19.63■□□□□ 0.73
CHEK2-210ENST00000416671 FKBP8Q14318 412 aa19.62■□□□□ 0.73
CHEK2-210ENST00000416671 MAGI3Q5TCQ9 1506 aa19.61■□□□□ 0.73
CHEK2-210ENST00000416671 SIN3AQ96ST3 1273 aa19.61■□□□□ 0.73
CHEK2-210ENST00000416671 KCNH8Q96L42 1107 aa19.6■□□□□ 0.73
CHEK2-210ENST00000416671 CDK13Q14004 1512 aaKnown RBP19.6■□□□□ 0.73
CHEK2-210ENST00000416671 RBM19Q9Y4C8 960 aaKnown RBP19.58■□□□□ 0.73
CHEK2-210ENST00000416671 PTPRKQ15262 1439 aa19.58■□□□□ 0.73
CHEK2-210ENST00000416671 EPRSP07814 1512 aaKnown RBP19.57■□□□□ 0.72
CHEK2-210ENST00000416671 PLB1Q6P1J6 1458 aa19.57■□□□□ 0.72
CHEK2-210ENST00000416671 PRG4Q92954 1404 aaPredicted RBP19.57■□□□□ 0.72
CHEK2-210ENST00000416671 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.57■□□□□ 0.72
CHEK2-210ENST00000416671 SUPT6HQ7KZ85 1726 aaKnown RBP19.57■□□□□ 0.72
CHEK2-210ENST00000416671 MYOM3Q5VTT5 1437 aa19.56■□□□□ 0.72
CHEK2-210ENST00000416671 CARMIL2Q6F5E8 1435 aa19.56■□□□□ 0.72
CHEK2-210ENST00000416671 HECW1Q76N89 1606 aa19.56■□□□□ 0.72
CHEK2-210ENST00000416671 EHBP1L1Q8N3D4 1523 aa19.56■□□□□ 0.72
CHEK2-210ENST00000416671 NUP153P49790 1475 aaKnown RBP19.53■□□□□ 0.72
CHEK2-210ENST00000416671 CCDC18Q5T9S5 1454 aa19.53■□□□□ 0.72
CHEK2-210ENST00000416671 NEFLP07196 543 aa19.52■□□□□ 0.72
CHEK2-210ENST00000416671 RAPGEF6Q8TEU7 1601 aa19.51■□□□□ 0.71
CHEK2-210ENST00000416671 CHIC2Q9UKJ5 165 aa19.5■□□□□ 0.71
CHEK2-210ENST00000416671 ERCC6L2Q5T890 1561 aa19.5■□□□□ 0.71
CHEK2-210ENST00000416671 PTPN23Q9H3S7 1636 aa19.48■□□□□ 0.71
CHEK2-210ENST00000416671 ARHGEF11O15085 1522 aa19.47■□□□□ 0.71
CHEK2-210ENST00000416671 RRP7BPQ9NSQ0 103 aa19.46■□□□□ 0.71
CHEK2-210ENST00000416671 HFM1A2PYH4 1435 aa19.45■□□□□ 0.7
CHEK2-210ENST00000416671 PTPRGP23470 1445 aa19.44■□□□□ 0.7
CHEK2-210ENST00000416671 NAIPQ13075 1403 aa19.43■□□□□ 0.7
CHEK2-210ENST00000416671 SHROOM2Q13796 1616 aa19.42■□□□□ 0.7
CHEK2-210ENST00000416671 CLASP1Q7Z460 1538 aa19.41■□□□□ 0.7
CHEK2-210ENST00000416671 ABCA8O94911 1581 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms