RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 GRIN2BQ13224 1484 aa20.99■□□□□ 0.95
SNHG17-202ENST00000414142 ZNF608Q9ULD9 1512 aaPredicted RBP20.99■□□□□ 0.95
SNHG17-202ENST00000414142 P3H3Q8IVL6 736 aa20.98■□□□□ 0.95
SNHG17-202ENST00000414142 FHAD1B1AJZ9 1412 aa20.96■□□□□ 0.95
SNHG17-202ENST00000414142 EFCAB5A4FU69 1503 aa20.94■□□□□ 0.94
SNHG17-202ENST00000414142 ADAMTS12P58397 1594 aa20.93■□□□□ 0.94
SNHG17-202ENST00000414142 ZEB1P37275 1124 aaPredicted RBP20.91■□□□□ 0.94
SNHG17-202ENST00000414142 KANK4Q5T7N3 995 aaPredicted RBP20.9■□□□□ 0.94
SNHG17-202ENST00000414142 FHOD3Q2V2M9 1422 aa20.89■□□□□ 0.94
SNHG17-202ENST00000414142 EIF4G3O43432 1585 aaKnown RBP20.89■□□□□ 0.93
SNHG17-202ENST00000414142 SNAPC4Q5SXM2 1469 aa20.84■□□□□ 0.93
SNHG17-202ENST00000414142 ATP1B4Q9UN42 357 aaPredicted RBP20.84■□□□□ 0.93
SNHG17-202ENST00000414142 PCF11O94913 1555 aaKnown RBP20.82■□□□□ 0.92
SNHG17-202ENST00000414142 SAMD9Q5K651 1589 aa20.81■□□□□ 0.92
SNHG17-202ENST00000414142 TIAM1Q13009 1591 aa20.81■□□□□ 0.92
SNHG17-202ENST00000414142 MAP3K1Q13233 1512 aa20.81■□□□□ 0.92
SNHG17-202ENST00000414142 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.8■□□□□ 0.92
SNHG17-202ENST00000414142 FMN1Q68DA7 1419 aa20.79■□□□□ 0.92
SNHG17-202ENST00000414142 HNRNPUL2Q1KMD3 747 aaKnown RBP20.78■□□□□ 0.92
SNHG17-202ENST00000414142 IQGAP2Q13576 1575 aa20.78■□□□□ 0.92
SNHG17-202ENST00000414142 FYCO1Q9BQS8 1478 aa20.77■□□□□ 0.91
SNHG17-202ENST00000414142 CCER1Q8TC90 406 aaPredicted RBP20.77■□□□□ 0.91
SNHG17-202ENST00000414142 CASKIN1Q8WXD9 1431 aa20.77■□□□□ 0.91
SNHG17-202ENST00000414142 MAGI1Q96QZ7 1491 aaPredicted RBP20.76■□□□□ 0.91
SNHG17-202ENST00000414142 GRIN2AQ12879 1464 aa20.74■□□□□ 0.91
SNHG17-202ENST00000414142 CFAP43Q8NDM7 1665 aa20.73■□□□□ 0.91
SNHG17-202ENST00000414142 CHMP7Q8WUX9 453 aaPredicted RBP20.72■□□□□ 0.91
SNHG17-202ENST00000414142 LRRC9Q6ZRR7 1453 aa20.72■□□□□ 0.91
SNHG17-202ENST00000414142 SYNJ2O15056 1496 aa20.7■□□□□ 0.9
SNHG17-202ENST00000414142 FBLN2P98095 1184 aa20.69■□□□□ 0.9
SNHG17-202ENST00000414142 KIAA0586Q9BVV6 1533 aa20.69■□□□□ 0.9
SNHG17-202ENST00000414142 RRBP1Q9P2E9 1410 aaKnown RBP20.67■□□□□ 0.9
SNHG17-202ENST00000414142 UGGT2Q9NYU1 1516 aa20.66■□□□□ 0.9
SNHG17-202ENST00000414142 CCNB3Q8WWL7 1395 aa20.62■□□□□ 0.89
SNHG17-202ENST00000414142 CEP170Q5SW79 1584 aa20.6■□□□□ 0.89
SNHG17-202ENST00000414142 LRRIQ1Q96JM4 1722 aa20.58■□□□□ 0.89
SNHG17-202ENST00000414142 PHLDB1Q86UU1 1377 aa20.56■□□□□ 0.88
SNHG17-202ENST00000414142 KIAA0556O60303 1618 aa20.56■□□□□ 0.88
SNHG17-202ENST00000414142 MTUS2Q5JR59 1369 aa20.56■□□□□ 0.88
SNHG17-202ENST00000414142 DISP1Q96F81 1524 aa20.55■□□□□ 0.88
SNHG17-202ENST00000414142 NUP160Q12769 1436 aa20.54■□□□□ 0.88
SNHG17-202ENST00000414142 HECW1Q76N89 1606 aa20.54■□□□□ 0.88
SNHG17-202ENST00000414142 ITGAEP38570 1179 aa20.52■□□□□ 0.88
SNHG17-202ENST00000414142 CCDC18Q5T9S5 1454 aa20.51■□□□□ 0.87
SNHG17-202ENST00000414142 FAM50AQ14320 339 aaKnown RBP20.49■□□□□ 0.87
SNHG17-202ENST00000414142 JPH4Q96JJ6 628 aa20.49■□□□□ 0.87
SNHG17-202ENST00000414142 EPRSP07814 1512 aaKnown RBP20.46■□□□□ 0.87
SNHG17-202ENST00000414142 EHBP1L1Q8N3D4 1523 aa20.46■□□□□ 0.87
SNHG17-202ENST00000414142 CARMIL2Q6F5E8 1435 aa20.45■□□□□ 0.86
SNHG17-202ENST00000414142 ARID3CA6NKF2 412 aa20.44■□□□□ 0.86
SNHG17-202ENST00000414142 SUPT6HQ7KZ85 1726 aaKnown RBP20.44■□□□□ 0.86
SNHG17-202ENST00000414142 CHD1O14646 1710 aa20.42■□□□□ 0.86
SNHG17-202ENST00000414142 NCOA2Q15596 1464 aa20.42■□□□□ 0.86
SNHG17-202ENST00000414142 CDK13Q14004 1512 aaKnown RBP20.42■□□□□ 0.86
SNHG17-202ENST00000414142 RAPGEF6Q8TEU7 1601 aa20.41■□□□□ 0.86
SNHG17-202ENST00000414142 MAGI3Q5TCQ9 1506 aa20.4■□□□□ 0.86
SNHG17-202ENST00000414142 FGD6Q6ZV73 1430 aa20.39■□□□□ 0.85
SNHG17-202ENST00000414142 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.36■□□□□ 0.85
SNHG17-202ENST00000414142 NUP153P49790 1475 aaKnown RBP20.36■□□□□ 0.85
SNHG17-202ENST00000414142 MYOM3Q5VTT5 1437 aa20.35■□□□□ 0.85
SNHG17-202ENST00000414142 PLB1Q6P1J6 1458 aa20.33■□□□□ 0.84
SNHG17-202ENST00000414142 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
SNHG17-202ENST00000414142 CDK11AQ9UQ88 783 aaPredicted RBP20.32■□□□□ 0.84
SNHG17-202ENST00000414142 PRG4Q92954 1404 aaPredicted RBP20.31■□□□□ 0.84
SNHG17-202ENST00000414142 DHX57Q6P158 1386 aaKnown RBP20.31■□□□□ 0.84
SNHG17-202ENST00000414142 SETD5Q9C0A6 1442 aa20.3■□□□□ 0.84
SNHG17-202ENST00000414142 RAB3GAP2Q9H2M9 1393 aa20.29■□□□□ 0.84
SNHG17-202ENST00000414142 PTPN23Q9H3S7 1636 aa20.26■□□□□ 0.83
SNHG17-202ENST00000414142 CLSPNQ9HAW4 1339 aa20.26■□□□□ 0.83
SNHG17-202ENST00000414142 ABCA8O94911 1581 aa20.23■□□□□ 0.83
SNHG17-202ENST00000414142 PTPRGP23470 1445 aa20.23■□□□□ 0.83
SNHG17-202ENST00000414142 SHROOM2Q13796 1616 aa20.21■□□□□ 0.83
SNHG17-202ENST00000414142 TROQ12816 1431 aaPredicted RBP20.2■□□□□ 0.82
SNHG17-202ENST00000414142 MIA2Q96PC5 1412 aa20.2■□□□□ 0.82
SNHG17-202ENST00000414142 TCOF1Q13428 1488 aaKnown RBP20.19■□□□□ 0.82
SNHG17-202ENST00000414142 PTPRKQ15262 1439 aa20.17■□□□□ 0.82
SNHG17-202ENST00000414142 PLEKHD1A6NEE1 506 aa20.15■□□□□ 0.82
SNHG17-202ENST00000414142 ATP10BO94823 1461 aa20.14■□□□□ 0.82
SNHG17-202ENST00000414142 CLASP1Q7Z460 1538 aa20.13■□□□□ 0.81
SNHG17-202ENST00000414142 ERCC6L2Q5T890 1561 aa20.11■□□□□ 0.81
SNHG17-202ENST00000414142 ADCY10Q96PN6 1610 aa20.11■□□□□ 0.81
SNHG17-202ENST00000414142 HFM1A2PYH4 1435 aa20.11■□□□□ 0.81
SNHG17-202ENST00000414142 KIF14Q15058 1648 aa20.1■□□□□ 0.81
SNHG17-202ENST00000414142 UACAQ9BZF9 1416 aa20.09■□□□□ 0.81
SNHG17-202ENST00000414142 CHIC2Q9UKJ5 165 aa20.09■□□□□ 0.81
SNHG17-202ENST00000414142 ITSN2Q9NZM3 1697 aa20.07■□□□□ 0.8
SNHG17-202ENST00000414142 CFDP1Q9UEE9 299 aaPredicted RBP20.06■□□□□ 0.8
SNHG17-202ENST00000414142 NAIPQ13075 1403 aa20.06■□□□□ 0.8
SNHG17-202ENST00000414142 MAPKBP1O60336 1514 aa20.06■□□□□ 0.8
SNHG17-202ENST00000414142 RRP7BPQ9NSQ0 103 aa20.05■□□□□ 0.8
SNHG17-202ENST00000414142 ZNF644Q9H582 1327 aaPredicted RBP20.05■□□□□ 0.8
SNHG17-202ENST00000414142 GPATCH8Q9UKJ3 1502 aaKnown RBP20.05■□□□□ 0.8
SNHG17-202ENST00000414142 ZNF777Q9ULD5 760 aaPredicted RBP20.02■□□□□ 0.79
SNHG17-202ENST00000414142 DAPK1P53355 1430 aa20.01■□□□□ 0.79
SNHG17-202ENST00000414142 ZNF316A6NFI3 1004 aaPredicted RBP20.01■□□□□ 0.79
SNHG17-202ENST00000414142 DNMT1P26358 1616 aaKnown RBP20■□□□□ 0.79
SNHG17-202ENST00000414142 ABCC2Q92887 1545 aa20■□□□□ 0.79
SNHG17-202ENST00000414142 CAMSAP2Q08AD1 1489 aa19.99■□□□□ 0.79
SNHG17-202ENST00000414142 GCC2Q8IWJ2 1684 aa19.99■□□□□ 0.79
SNHG17-202ENST00000414142 ABCC5O15440 1437 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms