RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 CTTNBP2Q8WZ74 1663 aa19.55■□□□□ 0.72
LITAF-203ENST00000413364 EFCAB5A4FU69 1503 aa19.53■□□□□ 0.72
LITAF-203ENST00000413364 MAP3K1Q13233 1512 aa19.52■□□□□ 0.72
LITAF-203ENST00000413364 ACIN1Q9UKV3 1341 aaKnown RBP19.51■□□□□ 0.71
LITAF-203ENST00000413364 FHAD1B1AJZ9 1412 aa19.51■□□□□ 0.71
LITAF-203ENST00000413364 BCL11AQ9H165 835 aa19.49■□□□□ 0.71
LITAF-203ENST00000413364 WDR62O43379 1518 aa19.49■□□□□ 0.71
LITAF-203ENST00000413364 HNRNPUL2Q1KMD3 747 aaKnown RBP19.48■□□□□ 0.71
LITAF-203ENST00000413364 TIAM1Q13009 1591 aa19.47■□□□□ 0.71
LITAF-203ENST00000413364 PRKCSHP14314 528 aaPredicted RBP19.46■□□□□ 0.71
LITAF-203ENST00000413364 PBRM1Q86U86 1689 aa19.45■□□□□ 0.7
LITAF-203ENST00000413364 CENPBP07199 599 aaPredicted RBP19.45■□□□□ 0.7
LITAF-203ENST00000413364 FHOD3Q2V2M9 1422 aa19.45■□□□□ 0.7
LITAF-203ENST00000413364 IFT140Q96RY7 1462 aa19.45■□□□□ 0.7
LITAF-203ENST00000413364 RRBP1Q9P2E9 1410 aaKnown RBP19.44■□□□□ 0.7
LITAF-203ENST00000413364 P3H3Q8IVL6 736 aa19.43■□□□□ 0.7
LITAF-203ENST00000413364 PCF11O94913 1555 aaKnown RBP19.43■□□□□ 0.7
LITAF-203ENST00000413364 AQRO60306 1485 aaKnown RBP eCLIP19.43■□□□□ 0.72e-8■■■□□ 18.1
LITAF-203ENST00000413364 GRIN2BQ13224 1484 aa19.4■□□□□ 0.7
LITAF-203ENST00000413364 FYCO1Q9BQS8 1478 aa19.4■□□□□ 0.7
LITAF-203ENST00000413364 ERICH6Q7L0X2 663 aa19.39■□□□□ 0.69
LITAF-203ENST00000413364 ADAMTS12P58397 1594 aa19.39■□□□□ 0.69
LITAF-203ENST00000413364 CFAP43Q8NDM7 1665 aa19.39■□□□□ 0.69
LITAF-203ENST00000413364 ERCC6Q03468 1493 aa19.39■□□□□ 0.69
LITAF-203ENST00000413364 SAMD9Q5K651 1589 aa19.39■□□□□ 0.69
LITAF-203ENST00000413364 CASKIN1Q8WXD9 1431 aa19.39■□□□□ 0.69
LITAF-203ENST00000413364 LRRC9Q6ZRR7 1453 aa19.38■□□□□ 0.69
LITAF-203ENST00000413364 FMN1Q68DA7 1419 aa19.37■□□□□ 0.69
LITAF-203ENST00000413364 ZNF608Q9ULD9 1512 aaPredicted RBP19.35■□□□□ 0.69
LITAF-203ENST00000413364 CCNB3Q8WWL7 1395 aa19.35■□□□□ 0.69
LITAF-203ENST00000413364 THOC2Q8NI27 1593 aaKnown RBP19.33■□□□□ 0.69
LITAF-203ENST00000413364 SNAPC4Q5SXM2 1469 aa19.31■□□□□ 0.68
LITAF-203ENST00000413364 GTF3C3Q9Y5Q9 886 aa19.29■□□□□ 0.68
LITAF-203ENST00000413364 ATP1B4Q9UN42 357 aaPredicted RBP19.28■□□□□ 0.68
LITAF-203ENST00000413364 IQGAP2Q13576 1575 aa19.27■□□□□ 0.68
LITAF-203ENST00000413364 EIF4G3O43432 1585 aaKnown RBP19.26■□□□□ 0.67
LITAF-203ENST00000413364 NEUROD1Q13562 356 aa19.26■□□□□ 0.67
LITAF-203ENST00000413364 PHLDB1Q86UU1 1377 aa19.25■□□□□ 0.67
LITAF-203ENST00000413364 UGGT2Q9NYU1 1516 aa19.19■□□□□ 0.66
LITAF-203ENST00000413364 MAGI1Q96QZ7 1491 aaPredicted RBP19.18■□□□□ 0.66
LITAF-203ENST00000413364 GRIN2AQ12879 1464 aa19.17■□□□□ 0.66
LITAF-203ENST00000413364 KIAA0586Q9BVV6 1533 aa19.17■□□□□ 0.66
LITAF-203ENST00000413364 LRRIQ1Q96JM4 1722 aa19.16■□□□□ 0.66
LITAF-203ENST00000413364 CLSPNQ9HAW4 1339 aa19.16■□□□□ 0.66
LITAF-203ENST00000413364 DHX57Q6P158 1386 aaKnown RBP19.16■□□□□ 0.66
LITAF-203ENST00000413364 MTUS2Q5JR59 1369 aa19.14■□□□□ 0.65
LITAF-203ENST00000413364 ITGAEP38570 1179 aa19.13■□□□□ 0.65
LITAF-203ENST00000413364 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.12■□□□□ 0.65
LITAF-203ENST00000413364 CCDC18Q5T9S5 1454 aa19.12■□□□□ 0.65
LITAF-203ENST00000413364 SYNJ2O15056 1496 aa19.11■□□□□ 0.65
LITAF-203ENST00000413364 HECW1Q76N89 1606 aa19.11■□□□□ 0.65
LITAF-203ENST00000413364 FAM50AQ14320 339 aaKnown RBP19.09■□□□□ 0.65
LITAF-203ENST00000413364 EHBP1L1Q8N3D4 1523 aa19.09■□□□□ 0.65
LITAF-203ENST00000413364 DISP1Q96F81 1524 aa19.08■□□□□ 0.64
LITAF-203ENST00000413364 FGD6Q6ZV73 1430 aa19.08■□□□□ 0.64
LITAF-203ENST00000413364 KIAA0556O60303 1618 aa19.07■□□□□ 0.64
LITAF-203ENST00000413364 CHMP7Q8WUX9 453 aaPredicted RBP19.06■□□□□ 0.64
LITAF-203ENST00000413364 NCOA2Q15596 1464 aa19.05■□□□□ 0.64
LITAF-203ENST00000413364 RAB3GAP2Q9H2M9 1393 aa19.05■□□□□ 0.64
LITAF-203ENST00000413364 SUPT6HQ7KZ85 1726 aaKnown RBP19.05■□□□□ 0.64
LITAF-203ENST00000413364 SETD5Q9C0A6 1442 aa19.05■□□□□ 0.64
LITAF-203ENST00000413364 CEP170Q5SW79 1584 aa19.04■□□□□ 0.64
LITAF-203ENST00000413364 EPRSP07814 1512 aaKnown RBP19.04■□□□□ 0.64
LITAF-203ENST00000413364 MAGI3Q5TCQ9 1506 aa19.03■□□□□ 0.64
LITAF-203ENST00000413364 MYOM3Q5VTT5 1437 aa19.02■□□□□ 0.64
LITAF-203ENST00000413364 ARHGEF11O15085 1522 aa19.02■□□□□ 0.64
LITAF-203ENST00000413364 NUP160Q12769 1436 aa19.01■□□□□ 0.63
LITAF-203ENST00000413364 CDK13Q14004 1512 aaKnown RBP18.98■□□□□ 0.63
LITAF-203ENST00000413364 ZNF316A6NFI3 1004 aaPredicted RBP18.98■□□□□ 0.63
LITAF-203ENST00000413364 ANP32EQ9BTT0 268 aa18.98■□□□□ 0.63
LITAF-203ENST00000413364 FBLN2P98095 1184 aa18.97■□□□□ 0.63
LITAF-203ENST00000413364 RAPGEF6Q8TEU7 1601 aa18.94■□□□□ 0.62
LITAF-203ENST00000413364 NUP153P49790 1475 aaKnown RBP18.93■□□□□ 0.62
LITAF-203ENST00000413364 DIEXFQ68CQ4 756 aaKnown RBP18.92■□□□□ 0.62
LITAF-203ENST00000413364 PTPN23Q9H3S7 1636 aa18.92■□□□□ 0.62
LITAF-203ENST00000413364 CARMIL2Q6F5E8 1435 aa18.91■□□□□ 0.62
LITAF-203ENST00000413364 MAPKBP1O60336 1514 aa18.91■□□□□ 0.62
LITAF-203ENST00000413364 JPH4Q96JJ6 628 aa18.9■□□□□ 0.62
LITAF-203ENST00000413364 TCOF1Q13428 1488 aaKnown RBP18.9■□□□□ 0.62
LITAF-203ENST00000413364 PTPRKQ15262 1439 aa18.89■□□□□ 0.61
LITAF-203ENST00000413364 ARID3CA6NKF2 412 aa18.87■□□□□ 0.61
LITAF-203ENST00000413364 HFM1A2PYH4 1435 aa18.87■□□□□ 0.61
LITAF-203ENST00000413364 MIA2Q96PC5 1412 aa18.87■□□□□ 0.61
LITAF-203ENST00000413364 CDK11AQ9UQ88 783 aaPredicted RBP18.83■□□□□ 0.61
LITAF-203ENST00000413364 PLB1Q6P1J6 1458 aa18.83■□□□□ 0.61
LITAF-203ENST00000413364 NAIPQ13075 1403 aa18.8■□□□□ 0.6
LITAF-203ENST00000413364 TROQ12816 1431 aaPredicted RBP18.78■□□□□ 0.6
LITAF-203ENST00000413364 ABCA8O94911 1581 aa18.77■□□□□ 0.6
LITAF-203ENST00000413364 AKNAQ7Z591 1439 aa18.76■□□□□ 0.59
LITAF-203ENST00000413364 CHD1O14646 1710 aa18.76■□□□□ 0.59
LITAF-203ENST00000413364 UACAQ9BZF9 1416 aa18.75■□□□□ 0.59
LITAF-203ENST00000413364 PRG4Q92954 1404 aaPredicted RBP18.75■□□□□ 0.59
LITAF-203ENST00000413364 ADCY10Q96PN6 1610 aa18.72■□□□□ 0.59
LITAF-203ENST00000413364 GCC2Q8IWJ2 1684 aa18.72■□□□□ 0.59
LITAF-203ENST00000413364 AEBP2Q6ZN18 517 aaPredicted RBP18.71■□□□□ 0.59
LITAF-203ENST00000413364 TIMELESSQ9UNS1 1208 aa18.7■□□□□ 0.58
LITAF-203ENST00000413364 SIN3AQ96ST3 1273 aa18.7■□□□□ 0.58
LITAF-203ENST00000413364 CHIC2Q9UKJ5 165 aa18.69■□□□□ 0.58
LITAF-203ENST00000413364 RRP7BPQ9NSQ0 103 aa18.68■□□□□ 0.58
LITAF-203ENST00000413364 PTPRGP23470 1445 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms