RNA–Protein interactions for RNA: ENST00000413164.6

SLC13A3-204, Transcript of solute carrier family 13 member 3, humanhuman

TSL 2 BASIC

Gene SLC13A3, Length 2,008 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-204ENST00000413164 AQRO60306 1485 aaKnown RBP eCLIP31.8■■■□□ 2.68
SLC13A3-204ENST00000413164 ABCA5Q8WWZ7 1642 aa31.79■■■□□ 2.68
SLC13A3-204ENST00000413164 EIF4G3O43432 1585 aaKnown RBP31.68■■■□□ 2.66
SLC13A3-204ENST00000413164 KANK4Q5T7N3 995 aaPredicted RBP31.67■■■□□ 2.66
SLC13A3-204ENST00000413164 PBRM1Q86U86 1689 aa31.65■■■□□ 2.66
SLC13A3-204ENST00000413164 GRIN2BQ13224 1484 aa31.63■■■□□ 2.65
SLC13A3-204ENST00000413164 MAP3K1Q13233 1512 aa31.6■■■□□ 2.65
SLC13A3-204ENST00000413164 CTTNBP2Q8WZ74 1663 aa31.59■■■□□ 2.65
SLC13A3-204ENST00000413164 HNRNPUL2Q1KMD3 747 aaKnown RBP31.58■■■□□ 2.65
SLC13A3-204ENST00000413164 EFCAB5A4FU69 1503 aa31.54■■■□□ 2.64
SLC13A3-204ENST00000413164 RRBP1Q9P2E9 1410 aaKnown RBP31.53■■■□□ 2.64
SLC13A3-204ENST00000413164 TIAM1Q13009 1591 aa31.53■■■□□ 2.64
SLC13A3-204ENST00000413164 FHAD1B1AJZ9 1412 aa31.52■■■□□ 2.64
SLC13A3-204ENST00000413164 SNAPC4Q5SXM2 1469 aa31.48■■■□□ 2.63
SLC13A3-204ENST00000413164 PCF11O94913 1555 aaKnown RBP31.43■■■□□ 2.62
SLC13A3-204ENST00000413164 ADAMTS12P58397 1594 aa31.42■■■□□ 2.62
SLC13A3-204ENST00000413164 MAGI1Q96QZ7 1491 aaPredicted RBP31.41■■■□□ 2.62
SLC13A3-204ENST00000413164 FHOD3Q2V2M9 1422 aa31.4■■■□□ 2.62
SLC13A3-204ENST00000413164 CFAP43Q8NDM7 1665 aa31.39■■■□□ 2.62
SLC13A3-204ENST00000413164 LRRC9Q6ZRR7 1453 aa31.38■■■□□ 2.61
SLC13A3-204ENST00000413164 FYCO1Q9BQS8 1478 aa31.35■■■□□ 2.61
SLC13A3-204ENST00000413164 FBLN2P98095 1184 aa31.34■■■□□ 2.61
SLC13A3-204ENST00000413164 P3H3Q8IVL6 736 aa31.34■■■□□ 2.61
SLC13A3-204ENST00000413164 SAMD9Q5K651 1589 aa31.34■■■□□ 2.61
SLC13A3-204ENST00000413164 CCNB3Q8WWL7 1395 aa31.33■■■□□ 2.61
SLC13A3-204ENST00000413164 CHMP7Q8WUX9 453 aaPredicted RBP31.33■■■□□ 2.61
SLC13A3-204ENST00000413164 CASKIN1Q8WXD9 1431 aa31.32■■■□□ 2.6
SLC13A3-204ENST00000413164 SYNJ2O15056 1496 aa31.29■■■□□ 2.6
SLC13A3-204ENST00000413164 FMN1Q68DA7 1419 aa31.27■■■□□ 2.6
SLC13A3-204ENST00000413164 GRIN2AQ12879 1464 aa31.23■■■□□ 2.59
SLC13A3-204ENST00000413164 PHLDB1Q86UU1 1377 aa31.17■■■□□ 2.58
SLC13A3-204ENST00000413164 CLSPNQ9HAW4 1339 aa31.12■■■□□ 2.57
SLC13A3-204ENST00000413164 CHD1O14646 1710 aa31.12■■■□□ 2.57
SLC13A3-204ENST00000413164 DHX57Q6P158 1386 aaKnown RBP31.11■■■□□ 2.57
SLC13A3-204ENST00000413164 ATP1B4Q9UN42 357 aaPredicted RBP31.08■■■□□ 2.57
SLC13A3-204ENST00000413164 IQGAP2Q13576 1575 aa31.08■■■□□ 2.57
SLC13A3-204ENST00000413164 LRRIQ1Q96JM4 1722 aa31.05■■■□□ 2.56
SLC13A3-204ENST00000413164 CEP170Q5SW79 1584 aa31.03■■■□□ 2.56
SLC13A3-204ENST00000413164 NUP160Q12769 1436 aa31■■■□□ 2.55
SLC13A3-204ENST00000413164 KIAA0586Q9BVV6 1533 aa31■■■□□ 2.55
SLC13A3-204ENST00000413164 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.97■■■□□ 2.55
SLC13A3-204ENST00000413164 UGGT2Q9NYU1 1516 aa30.94■■■□□ 2.54
SLC13A3-204ENST00000413164 ITGAEP38570 1179 aa30.93■■■□□ 2.54
SLC13A3-204ENST00000413164 MTUS2Q5JR59 1369 aa30.9■■■□□ 2.54
SLC13A3-204ENST00000413164 RAB3GAP2Q9H2M9 1393 aa30.89■■■□□ 2.54
SLC13A3-204ENST00000413164 ZNF316A6NFI3 1004 aaPredicted RBP30.89■■■□□ 2.54
SLC13A3-204ENST00000413164 CCDC18Q5T9S5 1454 aa30.86■■■□□ 2.53
SLC13A3-204ENST00000413164 FAM50AQ14320 339 aaKnown RBP30.86■■■□□ 2.53
SLC13A3-204ENST00000413164 FGD6Q6ZV73 1430 aa30.85■■■□□ 2.53
SLC13A3-204ENST00000413164 SETD5Q9C0A6 1442 aa30.85■■■□□ 2.53
SLC13A3-204ENST00000413164 DIEXFQ68CQ4 756 aaKnown RBP30.85■■■□□ 2.53
SLC13A3-204ENST00000413164 EHBP1L1Q8N3D4 1523 aa30.85■■■□□ 2.53
SLC13A3-204ENST00000413164 HECW1Q76N89 1606 aa30.84■■■□□ 2.53
SLC13A3-204ENST00000413164 JPH4Q96JJ6 628 aa30.83■■■□□ 2.53
SLC13A3-204ENST00000413164 NCOA2Q15596 1464 aa30.81■■■□□ 2.52
SLC13A3-204ENST00000413164 SUPT6HQ7KZ85 1726 aaKnown RBP30.81■■■□□ 2.52
SLC13A3-204ENST00000413164 ARHGEF11O15085 1522 aa30.78■■■□□ 2.52
SLC13A3-204ENST00000413164 MAGI3Q5TCQ9 1506 aa30.78■■■□□ 2.52
SLC13A3-204ENST00000413164 OSCARQ8IYS5 282 aa30.78■■■□□ 2.52
SLC13A3-204ENST00000413164 DISP1Q96F81 1524 aa30.77■■■□□ 2.52
SLC13A3-204ENST00000413164 KIAA0556O60303 1618 aa30.76■■■□□ 2.52
SLC13A3-204ENST00000413164 MYOM3Q5VTT5 1437 aa30.75■■■□□ 2.51
SLC13A3-204ENST00000413164 EPRSP07814 1512 aaKnown RBP30.75■■■□□ 2.51
SLC13A3-204ENST00000413164 MAPKBP1O60336 1514 aa30.73■■■□□ 2.51
SLC13A3-204ENST00000413164 CLASP1Q7Z460 1538 aa30.71■■■□□ 2.51
SLC13A3-204ENST00000413164 CARMIL2Q6F5E8 1435 aa30.66■■■□□ 2.5
SLC13A3-204ENST00000413164 PRG4Q92954 1404 aaPredicted RBP30.65■■■□□ 2.5
SLC13A3-204ENST00000413164 CDK13Q14004 1512 aaKnown RBP30.64■■■□□ 2.5
SLC13A3-204ENST00000413164 SHROOM2Q13796 1616 aa30.62■■■□□ 2.49
SLC13A3-204ENST00000413164 PTPRKQ15262 1439 aa30.61■■■□□ 2.49
SLC13A3-204ENST00000413164 PTPN23Q9H3S7 1636 aa30.6■■■□□ 2.49
SLC13A3-204ENST00000413164 TCOF1Q13428 1488 aaKnown RBP30.57■■■□□ 2.48
SLC13A3-204ENST00000413164 HFM1A2PYH4 1435 aa30.57■■■□□ 2.48
SLC13A3-204ENST00000413164 RAPGEF6Q8TEU7 1601 aa30.56■■■□□ 2.48
SLC13A3-204ENST00000413164 NUP153P49790 1475 aaKnown RBP30.55■■■□□ 2.48
SLC13A3-204ENST00000413164 MIA2Q96PC5 1412 aa30.49■■■□□ 2.47
SLC13A3-204ENST00000413164 ERCC6L2Q5T890 1561 aa30.49■■■□□ 2.47
SLC13A3-204ENST00000413164 NAIPQ13075 1403 aa30.46■■■□□ 2.47
SLC13A3-204ENST00000413164 PTPRGP23470 1445 aa30.42■■■□□ 2.46
SLC13A3-204ENST00000413164 ARID3CA6NKF2 412 aa30.4■■■□□ 2.46
SLC13A3-204ENST00000413164 UACAQ9BZF9 1416 aa30.39■■■□□ 2.46
SLC13A3-204ENST00000413164 PLB1Q6P1J6 1458 aa30.36■■■□□ 2.45
SLC13A3-204ENST00000413164 AKNAQ7Z591 1439 aa30.36■■■□□ 2.45
SLC13A3-204ENST00000413164 GCC2Q8IWJ2 1684 aa30.34■■■□□ 2.45
SLC13A3-204ENST00000413164 TIMELESSQ9UNS1 1208 aa30.34■■■□□ 2.45
SLC13A3-204ENST00000413164 SIN3AQ96ST3 1273 aa30.33■■■□□ 2.45
SLC13A3-204ENST00000413164 CDK11AQ9UQ88 783 aaPredicted RBP30.32■■■□□ 2.44
SLC13A3-204ENST00000413164 TROQ12816 1431 aaPredicted RBP30.29■■■□□ 2.44
SLC13A3-204ENST00000413164 MIER1Q8N108 512 aa30.26■■■□□ 2.43
SLC13A3-204ENST00000413164 ABCA8O94911 1581 aa30.26■■■□□ 2.43
SLC13A3-204ENST00000413164 ADCY10Q96PN6 1610 aa30.25■■■□□ 2.43
SLC13A3-204ENST00000413164 NEUROD1Q13562 356 aa30.23■■■□□ 2.43
SLC13A3-204ENST00000413164 DNMT1P26358 1616 aaKnown RBP30.22■■■□□ 2.43
SLC13A3-204ENST00000413164 RRP7BPQ9NSQ0 103 aa30.2■■■□□ 2.42
SLC13A3-204ENST00000413164 DAPK1P53355 1430 aa30.2■■■□□ 2.42
SLC13A3-204ENST00000413164 CHIC2Q9UKJ5 165 aa30.18■■■□□ 2.42
SLC13A3-204ENST00000413164 ROCK1Q13464 1354 aa30.17■■■□□ 2.42
SLC13A3-204ENST00000413164 ITSN2Q9NZM3 1697 aa30.17■■■□□ 2.42
SLC13A3-204ENST00000413164 KDM6BO15054 1643 aa30.16■■■□□ 2.42
SLC13A3-204ENST00000413164 ABCC5O15440 1437 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms