RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 UBTFP17480 764 aaKnown RBP30.44■■■□□ 2.46
LMO2-203ENST00000411482 CUL7Q14999 1698 aa30.43■■■□□ 2.46
LMO2-203ENST00000411482 CARMIL1Q5VZK9 1371 aa30.4■■■□□ 2.46
LMO2-203ENST00000411482 RAPGEF2Q9Y4G8 1499 aa30.4■■■□□ 2.46
LMO2-203ENST00000411482 CLASP1Q7Z460 1538 aa30.36■■■□□ 2.45
LMO2-203ENST00000411482 NUP160Q12769 1436 aa30.35■■■□□ 2.45
LMO2-203ENST00000411482 CEP170Q5SW79 1584 aa30.33■■■□□ 2.45
LMO2-203ENST00000411482 CLIP1P30622 1438 aa30.2■■■□□ 2.42
LMO2-203ENST00000411482 ARHGEF11O15085 1522 aa30.15■■■□□ 2.42
LMO2-203ENST00000411482 RIMBP3CA6NJZ7 1639 aa30.14■■■□□ 2.41
LMO2-203ENST00000411482 RIMBP3BA6NNM3 1639 aa30.14■■■□□ 2.41
LMO2-203ENST00000411482 RIMBP3Q9UFD9 1639 aa30.14■■■□□ 2.41
LMO2-203ENST00000411482 HRCP23327 699 aa30.11■■■□□ 2.41
LMO2-203ENST00000411482 KIAA0586Q9BVV6 1533 aa30.11■■■□□ 2.41
LMO2-203ENST00000411482 SHROOM2Q13796 1616 aa30.1■■■□□ 2.41
LMO2-203ENST00000411482 JPH4Q96JJ6 628 aa30.06■■■□□ 2.4
LMO2-203ENST00000411482 VPS8Q8N3P4 1428 aa30.03■■■□□ 2.4
LMO2-203ENST00000411482 ERCC6L2Q5T890 1561 aa30.01■■■□□ 2.39
LMO2-203ENST00000411482 ARAP1Q96P48 1450 aa29.95■■■□□ 2.38
LMO2-203ENST00000411482 IQGAP2Q13576 1575 aa29.94■■■□□ 2.38
LMO2-203ENST00000411482 PRG4Q92954 1404 aaPredicted RBP29.94■■■□□ 2.38
LMO2-203ENST00000411482 CTTNBP2Q8WZ74 1663 aa29.92■■■□□ 2.38
LMO2-203ENST00000411482 CYB5RLQ6IPT4 315 aa29.87■■■□□ 2.37
LMO2-203ENST00000411482 PPARGC1BQ86YN6 1023 aaKnown RBP29.87■■■□□ 2.37
LMO2-203ENST00000411482 UGGT2Q9NYU1 1516 aa29.82■■■□□ 2.36
LMO2-203ENST00000411482 ARHGAP35Q9NRY4 1499 aa29.79■■■□□ 2.36
LMO2-203ENST00000411482 DISP1Q96F81 1524 aa29.78■■■□□ 2.36
LMO2-203ENST00000411482 CARMIL2Q6F5E8 1435 aa29.71■■■□□ 2.35
LMO2-203ENST00000411482 RANGAP1P46060 587 aaPredicted RBP29.67■■■□□ 2.34
LMO2-203ENST00000411482 KIAA0556O60303 1618 aa29.66■■■□□ 2.34
LMO2-203ENST00000411482 APLP2Q06481 763 aa29.63■■■□□ 2.33
LMO2-203ENST00000411482 PTPRGP23470 1445 aa29.61■■■□□ 2.33
LMO2-203ENST00000411482 SAMD9Q5K651 1589 aa29.57■■■□□ 2.32
LMO2-203ENST00000411482 ZEB1P37275 1124 aaPredicted RBP29.55■■■□□ 2.32
LMO2-203ENST00000411482 EFCAB5A4FU69 1503 aa29.54■■■□□ 2.32
LMO2-203ENST00000411482 TTBK1Q5TCY1 1321 aaPredicted RBP29.53■■■□□ 2.32
LMO2-203ENST00000411482 MAP3K1Q13233 1512 aa29.52■■■□□ 2.32
LMO2-203ENST00000411482 P3H3Q8IVL6 736 aa29.51■■■□□ 2.32
LMO2-203ENST00000411482 ADCY10Q96PN6 1610 aa29.48■■■□□ 2.31
LMO2-203ENST00000411482 UACAQ9BZF9 1416 aa29.42■■■□□ 2.3
LMO2-203ENST00000411482 UHRF1BP1LA0JNW5 1464 aa29.39■■■□□ 2.3
LMO2-203ENST00000411482 FHOD3Q2V2M9 1422 aa29.39■■■□□ 2.3
LMO2-203ENST00000411482 PLB1Q6P1J6 1458 aa29.38■■■□□ 2.29
LMO2-203ENST00000411482 KANK4Q5T7N3 995 aaPredicted RBP29.37■■■□□ 2.29
LMO2-203ENST00000411482 ABCA8O94911 1581 aa29.36■■■□□ 2.29
LMO2-203ENST00000411482 ABCC2Q92887 1545 aa29.35■■■□□ 2.29
LMO2-203ENST00000411482 TIAM1Q13009 1591 aa29.33■■■□□ 2.29
LMO2-203ENST00000411482 CASKIN1Q8WXD9 1431 aa29.29■■■□□ 2.28
LMO2-203ENST00000411482 FYCO1Q9BQS8 1478 aa29.28■■■□□ 2.28
LMO2-203ENST00000411482 FMN1Q68DA7 1419 aa29.27■■■□□ 2.28
LMO2-203ENST00000411482 KDM5BQ9UGL1 1544 aa29.27■■■□□ 2.28
LMO2-203ENST00000411482 NPM1P06748 294 aaKnown RBP eCLIP29.26■■■□□ 2.27
LMO2-203ENST00000411482 PCF11O94913 1555 aaKnown RBP29.26■■■□□ 2.27
LMO2-203ENST00000411482 RRBP1Q9P2E9 1410 aaKnown RBP29.26■■■□□ 2.27
LMO2-203ENST00000411482 CFAP43Q8NDM7 1665 aa29.22■■■□□ 2.27
LMO2-203ENST00000411482 MAPKBP1O60336 1514 aa29.21■■■□□ 2.27
LMO2-203ENST00000411482 RAPGEF6Q8TEU7 1601 aa29.21■■■□□ 2.27
LMO2-203ENST00000411482 LRRC9Q6ZRR7 1453 aa29.2■■■□□ 2.27
LMO2-203ENST00000411482 ZCCHC11Q5TAX3 1644 aaKnown RBP29.19■■■□□ 2.26
LMO2-203ENST00000411482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.16■■■□□ 2.26
LMO2-203ENST00000411482 NUP153P49790 1475 aaKnown RBP29.15■■■□□ 2.26
LMO2-203ENST00000411482 ATP10BO94823 1461 aa29.14■■■□□ 2.26
LMO2-203ENST00000411482 TRHP20396 242 aaPredicted RBP29.11■■■□□ 2.25
LMO2-203ENST00000411482 CCER1Q8TC90 406 aaPredicted RBP29.11■■■□□ 2.25
LMO2-203ENST00000411482 ASXL2Q76L83 1435 aa29.11■■■□□ 2.25
LMO2-203ENST00000411482 ARID3CA6NKF2 412 aa29.09■■■□□ 2.25
LMO2-203ENST00000411482 KIF13AQ9H1H9 1805 aa29.08■■■□□ 2.25
LMO2-203ENST00000411482 ABCC10Q5T3U5 1492 aa29.06■■■□□ 2.24
LMO2-203ENST00000411482 CCNB3Q8WWL7 1395 aa29.06■■■□□ 2.24
LMO2-203ENST00000411482 HNRNPUL2Q1KMD3 747 aaKnown RBP29.05■■■□□ 2.24
LMO2-203ENST00000411482 DIP2BQ9P265 1576 aa29.02■■■□□ 2.24
LMO2-203ENST00000411482 LRRIQ1Q96JM4 1722 aa28.98■■■□□ 2.23
LMO2-203ENST00000411482 FAM69CQ0P6D2 419 aa28.98■■■□□ 2.23
LMO2-203ENST00000411482 WDR7Q9Y4E6 1490 aa28.97■■■□□ 2.23
LMO2-203ENST00000411482 HECW1Q76N89 1606 aa28.97■■■□□ 2.23
LMO2-203ENST00000411482 PHLDB1Q86UU1 1377 aa28.96■■■□□ 2.23
LMO2-203ENST00000411482 EPRSP07814 1512 aaKnown RBP28.95■■■□□ 2.23
LMO2-203ENST00000411482 CDK13Q14004 1512 aaKnown RBP28.95■■■□□ 2.23
LMO2-203ENST00000411482 ATP1B4Q9UN42 357 aaPredicted RBP28.94■■■□□ 2.22
LMO2-203ENST00000411482 GLI2P10070 1586 aa28.91■■■□□ 2.22
LMO2-203ENST00000411482 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.9■■■□□ 2.22
LMO2-203ENST00000411482 CCDC18Q5T9S5 1454 aa28.89■■■□□ 2.22
LMO2-203ENST00000411482 KCNH8Q96L42 1107 aa28.88■■■□□ 2.21
LMO2-203ENST00000411482 PLEKHD1A6NEE1 506 aa28.84■■■□□ 2.21
LMO2-203ENST00000411482 MTUS2Q5JR59 1369 aa28.81■■■□□ 2.2
LMO2-203ENST00000411482 EHBP1L1Q8N3D4 1523 aa28.81■■■□□ 2.2
LMO2-203ENST00000411482 MAP3K4Q9Y6R4 1608 aa28.8■■■□□ 2.2
LMO2-203ENST00000411482 TSPOAP1O95153 1857 aa28.8■■■□□ 2.2
LMO2-203ENST00000411482 CLSPNQ9HAW4 1339 aa28.77■■■□□ 2.2
LMO2-203ENST00000411482 PPRC1Q5VV67 1664 aaKnown RBP28.77■■■□□ 2.2
LMO2-203ENST00000411482 MAGI3Q5TCQ9 1506 aa28.74■■■□□ 2.19
LMO2-203ENST00000411482 CDK11AQ9UQ88 783 aaPredicted RBP28.74■■■□□ 2.19
LMO2-203ENST00000411482 ABCA9Q8IUA7 1624 aa28.73■■■□□ 2.19
LMO2-203ENST00000411482 NCOA2Q15596 1464 aa28.73■■■□□ 2.19
LMO2-203ENST00000411482 FGD6Q6ZV73 1430 aa28.73■■■□□ 2.19
LMO2-203ENST00000411482 SUPT6HQ7KZ85 1726 aaKnown RBP28.72■■■□□ 2.19
LMO2-203ENST00000411482 TROQ12816 1431 aaPredicted RBP28.71■■■□□ 2.19
LMO2-203ENST00000411482 CD109Q6YHK3 1445 aa28.7■■■□□ 2.18
LMO2-203ENST00000411482 DHX57Q6P158 1386 aaKnown RBP28.68■■■□□ 2.18
LMO2-203ENST00000411482 MYOM3Q5VTT5 1437 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms