RNA–Protein interactions for RNA: ENST00000406453.3

SLC29A4-203, Transcript of solute carrier family 29 member 4, humanhuman

TSL 1 (best) BASIC

Gene SLC29A4, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC29A4-203ENST00000406453 THOC2Q8NI27 1593 aaKnown RBP22.45■■□□□ 1.18
SLC29A4-203ENST00000406453 CTTNBP2Q8WZ74 1663 aa22.43■■□□□ 1.18
SLC29A4-203ENST00000406453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.43■■□□□ 1.18
SLC29A4-203ENST00000406453 FHOD3Q2V2M9 1422 aa22.42■■□□□ 1.18
SLC29A4-203ENST00000406453 IFT140Q96RY7 1462 aa22.41■■□□□ 1.18
SLC29A4-203ENST00000406453 ATP1B4Q9UN42 357 aaPredicted RBP22.37■■□□□ 1.17
SLC29A4-203ENST00000406453 HNRNPUL2Q1KMD3 747 aaKnown RBP22.36■■□□□ 1.17
SLC29A4-203ENST00000406453 GRIN2BQ13224 1484 aa22.35■■□□□ 1.17
SLC29A4-203ENST00000406453 ADAMTS12P58397 1594 aa22.34■■□□□ 1.17
SLC29A4-203ENST00000406453 EIF4G3O43432 1585 aaKnown RBP22.33■■□□□ 1.17
SLC29A4-203ENST00000406453 FHAD1B1AJZ9 1412 aa22.33■■□□□ 1.16
SLC29A4-203ENST00000406453 PCF11O94913 1555 aaKnown RBP22.3■■□□□ 1.16
SLC29A4-203ENST00000406453 SNAPC4Q5SXM2 1469 aa22.29■■□□□ 1.16
SLC29A4-203ENST00000406453 EFCAB5A4FU69 1503 aa22.25■■□□□ 1.15
SLC29A4-203ENST00000406453 CCER1Q8TC90 406 aaPredicted RBP22.25■■□□□ 1.15
SLC29A4-203ENST00000406453 TIAM1Q13009 1591 aa22.23■■□□□ 1.15
SLC29A4-203ENST00000406453 SAMD9Q5K651 1589 aa22.21■■□□□ 1.15
SLC29A4-203ENST00000406453 FBLN2P98095 1184 aa22.2■■□□□ 1.14
SLC29A4-203ENST00000406453 IQGAP2Q13576 1575 aa22.16■■□□□ 1.14
SLC29A4-203ENST00000406453 LRRC9Q6ZRR7 1453 aa22.14■■□□□ 1.14
SLC29A4-203ENST00000406453 CASKIN1Q8WXD9 1431 aa22.14■■□□□ 1.13
SLC29A4-203ENST00000406453 GRIN2AQ12879 1464 aa22.14■■□□□ 1.13
SLC29A4-203ENST00000406453 ZEB1P37275 1124 aaPredicted RBP22.13■■□□□ 1.13
SLC29A4-203ENST00000406453 CHMP7Q8WUX9 453 aaPredicted RBP22.13■■□□□ 1.13
SLC29A4-203ENST00000406453 FYCO1Q9BQS8 1478 aa22.12■■□□□ 1.13
SLC29A4-203ENST00000406453 FMN1Q68DA7 1419 aa22.12■■□□□ 1.13
SLC29A4-203ENST00000406453 CFAP43Q8NDM7 1665 aa22.11■■□□□ 1.13
SLC29A4-203ENST00000406453 LRRIQ1Q96JM4 1722 aa22.1■■□□□ 1.13
SLC29A4-203ENST00000406453 ITGAEP38570 1179 aa22.1■■□□□ 1.13
SLC29A4-203ENST00000406453 MAP3K1Q13233 1512 aa22.09■■□□□ 1.13
SLC29A4-203ENST00000406453 ARID3CA6NKF2 412 aa22.08■■□□□ 1.13
SLC29A4-203ENST00000406453 PHLDB1Q86UU1 1377 aa22.07■■□□□ 1.12
SLC29A4-203ENST00000406453 MAGI1Q96QZ7 1491 aaPredicted RBP22.07■■□□□ 1.12
SLC29A4-203ENST00000406453 RRBP1Q9P2E9 1410 aaKnown RBP22.07■■□□□ 1.12
SLC29A4-203ENST00000406453 SYNJ2O15056 1496 aa22.05■■□□□ 1.12
SLC29A4-203ENST00000406453 CEP170Q5SW79 1584 aa22.04■■□□□ 1.12
SLC29A4-203ENST00000406453 CCNB3Q8WWL7 1395 aa22.04■■□□□ 1.12
SLC29A4-203ENST00000406453 KIAA0586Q9BVV6 1533 aa22.04■■□□□ 1.12
SLC29A4-203ENST00000406453 UGGT2Q9NYU1 1516 aa22■■□□□ 1.11
SLC29A4-203ENST00000406453 DISP1Q96F81 1524 aa21.99■■□□□ 1.11
SLC29A4-203ENST00000406453 FAM50AQ14320 339 aaKnown RBP21.96■■□□□ 1.11
SLC29A4-203ENST00000406453 KIAA0556O60303 1618 aa21.95■■□□□ 1.1
SLC29A4-203ENST00000406453 MTUS2Q5JR59 1369 aa21.94■■□□□ 1.1
SLC29A4-203ENST00000406453 MAGI3Q5TCQ9 1506 aa21.92■■□□□ 1.1
SLC29A4-203ENST00000406453 CDK13Q14004 1512 aaKnown RBP21.92■■□□□ 1.1
SLC29A4-203ENST00000406453 NUP160Q12769 1436 aa21.9■■□□□ 1.1
SLC29A4-203ENST00000406453 JPH4Q96JJ6 628 aa21.89■■□□□ 1.09
SLC29A4-203ENST00000406453 EPRSP07814 1512 aaKnown RBP21.86■■□□□ 1.09
SLC29A4-203ENST00000406453 HECW1Q76N89 1606 aa21.86■■□□□ 1.09
SLC29A4-203ENST00000406453 NCOA2Q15596 1464 aa21.83■■□□□ 1.09
SLC29A4-203ENST00000406453 CHD1O14646 1710 aa21.83■■□□□ 1.08
SLC29A4-203ENST00000406453 PLB1Q6P1J6 1458 aa21.8■■□□□ 1.08
SLC29A4-203ENST00000406453 CCDC18Q5T9S5 1454 aa21.8■■□□□ 1.08
SLC29A4-203ENST00000406453 NUP153P49790 1475 aaKnown RBP21.79■■□□□ 1.08
SLC29A4-203ENST00000406453 FGD6Q6ZV73 1430 aa21.79■■□□□ 1.08
SLC29A4-203ENST00000406453 EHBP1L1Q8N3D4 1523 aa21.78■■□□□ 1.08
SLC29A4-203ENST00000406453 DHX57Q6P158 1386 aaKnown RBP21.77■■□□□ 1.08
SLC29A4-203ENST00000406453 SUPT6HQ7KZ85 1726 aaKnown RBP21.77■■□□□ 1.08
SLC29A4-203ENST00000406453 RAPGEF6Q8TEU7 1601 aa21.77■■□□□ 1.07
SLC29A4-203ENST00000406453 RAB3GAP2Q9H2M9 1393 aa21.75■■□□□ 1.07
SLC29A4-203ENST00000406453 CARMIL2Q6F5E8 1435 aa21.73■■□□□ 1.07
SLC29A4-203ENST00000406453 MYOM3Q5VTT5 1437 aa21.73■■□□□ 1.07
SLC29A4-203ENST00000406453 PRG4Q92954 1404 aaPredicted RBP21.71■■□□□ 1.07
SLC29A4-203ENST00000406453 ARHGEF11O15085 1522 aa21.7■■□□□ 1.06
SLC29A4-203ENST00000406453 PTPRKQ15262 1439 aa21.69■■□□□ 1.06
SLC29A4-203ENST00000406453 SETD5Q9C0A6 1442 aa21.66■■□□□ 1.06
SLC29A4-203ENST00000406453 PTPN23Q9H3S7 1636 aa21.64■■□□□ 1.05
SLC29A4-203ENST00000406453 ERCC6L2Q5T890 1561 aa21.63■■□□□ 1.05
SLC29A4-203ENST00000406453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.62■■□□□ 1.05
SLC29A4-203ENST00000406453 CHIC2Q9UKJ5 165 aa21.61■■□□□ 1.05
SLC29A4-203ENST00000406453 ZNF644Q9H582 1327 aaPredicted RBP21.59■■□□□ 1.05
SLC29A4-203ENST00000406453 ABCA8O94911 1581 aa21.58■■□□□ 1.04
SLC29A4-203ENST00000406453 PTPRGP23470 1445 aa21.58■■□□□ 1.04
SLC29A4-203ENST00000406453 CDK11AQ9UQ88 783 aaPredicted RBP21.56■■□□□ 1.04
SLC29A4-203ENST00000406453 KIF14Q15058 1648 aa21.55■■□□□ 1.04
SLC29A4-203ENST00000406453 ATP10BO94823 1461 aa21.54■■□□□ 1.04
SLC29A4-203ENST00000406453 RRP7BPQ9NSQ0 103 aa21.54■■□□□ 1.04
SLC29A4-203ENST00000406453 SHROOM2Q13796 1616 aa21.53■■□□□ 1.04
SLC29A4-203ENST00000406453 MAPKBP1O60336 1514 aa21.53■■□□□ 1.04
SLC29A4-203ENST00000406453 TROQ12816 1431 aaPredicted RBP21.53■■□□□ 1.04
SLC29A4-203ENST00000406453 TCOF1Q13428 1488 aaKnown RBP21.51■■□□□ 1.03
SLC29A4-203ENST00000406453 CLSPNQ9HAW4 1339 aa21.48■■□□□ 1.03
SLC29A4-203ENST00000406453 NAIPQ13075 1403 aa21.48■■□□□ 1.03
SLC29A4-203ENST00000406453 MIA2Q96PC5 1412 aa21.48■■□□□ 1.03
SLC29A4-203ENST00000406453 ZNF777Q9ULD5 760 aaPredicted RBP21.47■■□□□ 1.03
SLC29A4-203ENST00000406453 HFM1A2PYH4 1435 aa21.47■■□□□ 1.03
SLC29A4-203ENST00000406453 PLEKHD1A6NEE1 506 aa21.47■■□□□ 1.03
SLC29A4-203ENST00000406453 SIN3AQ96ST3 1273 aa21.47■■□□□ 1.03
SLC29A4-203ENST00000406453 CLASP1Q7Z460 1538 aa21.46■■□□□ 1.03
SLC29A4-203ENST00000406453 CFDP1Q9UEE9 299 aaPredicted RBP21.43■■□□□ 1.02
SLC29A4-203ENST00000406453 GPATCH8Q9UKJ3 1502 aaKnown RBP21.43■■□□□ 1.02
SLC29A4-203ENST00000406453 NEUROD1Q13562 356 aa21.42■■□□□ 1.02
SLC29A4-203ENST00000406453 UACAQ9BZF9 1416 aa21.42■■□□□ 1.02
SLC29A4-203ENST00000406453 KDM6BO15054 1643 aa21.42■■□□□ 1.02
SLC29A4-203ENST00000406453 ADCY10Q96PN6 1610 aa21.4■■□□□ 1.02
SLC29A4-203ENST00000406453 ZNF316A6NFI3 1004 aaPredicted RBP21.39■■□□□ 1.02
SLC29A4-203ENST00000406453 ABCC5O15440 1437 aa21.38■■□□□ 1.01
SLC29A4-203ENST00000406453 DAPK1P53355 1430 aa21.38■■□□□ 1.01
SLC29A4-203ENST00000406453 CAMSAP2Q08AD1 1489 aa21.37■■□□□ 1.01
SLC29A4-203ENST00000406453 ABCC10Q5T3U5 1492 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms