RNA–Protein interactions for RNA: ENST00000406453.3

SLC29A4-203, Transcript of solute carrier family 29 member 4, humanhuman

TSL 1 (best) BASIC

Gene SLC29A4, Length 2,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC29A4-203ENST00000406453 NISCHQ9Y2I1 1504 aa32.35■■■□□ 2.77
SLC29A4-203ENST00000406453 CCDC180Q9P1Z9 1646 aa27.87■■■□□ 2.05
SLC29A4-203ENST00000406453 ZCCHC6Q5VYS8 1495 aaKnown RBP27.2■■□□□ 1.95
SLC29A4-203ENST00000406453 DCAF8L2P0C7V8 631 aa27.06■■□□□ 1.92
SLC29A4-203ENST00000406453 SHROOM4Q9ULL8 1493 aa27.05■■□□□ 1.92
SLC29A4-203ENST00000406453 ABCC9O60706 1549 aa26.53■■□□□ 1.84
SLC29A4-203ENST00000406453 DCAF1Q9Y4B6 1507 aa26.51■■□□□ 1.83
SLC29A4-203ENST00000406453 SUPT5HO00267 1087 aaKnown RBP26.12■■□□□ 1.77
SLC29A4-203ENST00000406453 SCRIBQ14160 1630 aa26.04■■□□□ 1.76
SLC29A4-203ENST00000406453 MYO15BQ96JP2 1530 aa26.03■■□□□ 1.76
SLC29A4-203ENST00000406453 NACADO15069 1562 aa25.93■■□□□ 1.74
SLC29A4-203ENST00000406453 RB1CC1Q8TDY2 1594 aa25.7■■□□□ 1.7
SLC29A4-203ENST00000406453 UNC13AQ9UPW8 1703 aa25.37■■□□□ 1.65
SLC29A4-203ENST00000406453 CECR2Q9BXF3 1484 aa25.33■■□□□ 1.65
SLC29A4-203ENST00000406453 RSF1Q96T23 1441 aaPredicted RBP25.3■■□□□ 1.64
SLC29A4-203ENST00000406453 PABPN1Q86U42 306 aaKnown RBP eCLIP25.21■■□□□ 1.633e-7■□□□□ 9.8
SLC29A4-203ENST00000406453 MROH2BQ7Z745 1585 aa25.15■■□□□ 1.62
SLC29A4-203ENST00000406453 BICRAQ9NZM4 1560 aa25.07■■□□□ 1.6
SLC29A4-203ENST00000406453 CHIC1Q5VXU3 224 aa25■■□□□ 1.59
SLC29A4-203ENST00000406453 WIZO95785 1651 aa24.98■■□□□ 1.59
SLC29A4-203ENST00000406453 BAZ1AQ9NRL2 1556 aaPredicted RBP24.89■■□□□ 1.57
SLC29A4-203ENST00000406453 SMARCA4P51532 1647 aa24.82■■□□□ 1.56
SLC29A4-203ENST00000406453 TOP2AP11388 1531 aaKnown RBP24.53■■□□□ 1.52
SLC29A4-203ENST00000406453 CCDC88BA6NC98 1476 aa24.43■■□□□ 1.5
SLC29A4-203ENST00000406453 SMARCA2P51531 1590 aa24.4■■□□□ 1.5
SLC29A4-203ENST00000406453 ATAD2BQ9ULI0 1458 aa24.36■■□□□ 1.49
SLC29A4-203ENST00000406453 PEG3Q9GZU2 1588 aa24.35■■□□□ 1.49
SLC29A4-203ENST00000406453 TRIM41Q8WV44 630 aa24.35■■□□□ 1.49
SLC29A4-203ENST00000406453 EIF4G1Q04637 1599 aaKnown RBP24.28■■□□□ 1.48
SLC29A4-203ENST00000406453 LOC105371045A0A1W2PR82 267 aa24.27■■□□□ 1.48
SLC29A4-203ENST00000406453 BAZ1BQ9UIG0 1483 aaKnown RBP24.24■■□□□ 1.47
SLC29A4-203ENST00000406453 FAM9AQ8IZU1 332 aaPredicted RBP24.19■■□□□ 1.46
SLC29A4-203ENST00000406453 ABCC8Q09428 1581 aa24.14■■□□□ 1.46
SLC29A4-203ENST00000406453 EHMT2Q96KQ7 1210 aa24.04■■□□□ 1.44
SLC29A4-203ENST00000406453 NCAPD3P42695 1498 aa24■■□□□ 1.43
SLC29A4-203ENST00000406453 HMGXB3Q12766 1538 aa23.94■■□□□ 1.42
SLC29A4-203ENST00000406453 CC2D2AQ9P2K1 1620 aa23.88■■□□□ 1.41
SLC29A4-203ENST00000406453 WRNQ14191 1432 aaPredicted RBP eCLIP23.77■■□□□ 1.4
SLC29A4-203ENST00000406453 SOGA1O94964 1423 aa23.74■■□□□ 1.39
SLC29A4-203ENST00000406453 SYNJ1O43426 1573 aa23.74■■□□□ 1.39
SLC29A4-203ENST00000406453 RUSC2Q8N2Y8 1516 aa23.69■■□□□ 1.38
SLC29A4-203ENST00000406453 CFTRP13569 1480 aa23.6■■□□□ 1.37
SLC29A4-203ENST00000406453 DNAJC5BQ9UF47 199 aa23.59■■□□□ 1.37
SLC29A4-203ENST00000406453 CADPSQ9ULU8 1353 aa23.49■■□□□ 1.35
SLC29A4-203ENST00000406453 TOP2BQ02880 1626 aa23.48■■□□□ 1.35
SLC29A4-203ENST00000406453 CSRNP3Q8WYN3 585 aa23.47■■□□□ 1.35
SLC29A4-203ENST00000406453 CUX1P39880 1505 aa23.46■■□□□ 1.35
SLC29A4-203ENST00000406453 NESP48681 1621 aa23.42■■□□□ 1.34
SLC29A4-203ENST00000406453 PCGF6Q9BYE7 350 aa23.41■■□□□ 1.34
SLC29A4-203ENST00000406453 BIVM-ERCC5R4GMW8 1640 aa23.41■■□□□ 1.34
SLC29A4-203ENST00000406453 PRDM2Q13029 1718 aa23.39■■□□□ 1.33
SLC29A4-203ENST00000406453 EEA1Q15075 1411 aa23.36■■□□□ 1.33
SLC29A4-203ENST00000406453 UBTFP17480 764 aaKnown RBP23.32■■□□□ 1.32
SLC29A4-203ENST00000406453 FANCD2Q9BXW9 1451 aa23.28■■□□□ 1.32
SLC29A4-203ENST00000406453 PPARGC1BQ86YN6 1023 aaKnown RBP23.26■■□□□ 1.31
SLC29A4-203ENST00000406453 GOLGA3Q08378 1498 aa23.22■■□□□ 1.31
SLC29A4-203ENST00000406453 CEP162Q5TB80 1403 aa23.21■■□□□ 1.31
SLC29A4-203ENST00000406453 TNIKQ9UKE5 1360 aa23.2■■□□□ 1.3
SLC29A4-203ENST00000406453 RAPGEF2Q9Y4G8 1499 aa23.19■■□□□ 1.3
SLC29A4-203ENST00000406453 CEP164Q9UPV0 1460 aa23.17■■□□□ 1.3
SLC29A4-203ENST00000406453 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
SLC29A4-203ENST00000406453 KIF21BO75037 1637 aa23.15■■□□□ 1.3
SLC29A4-203ENST00000406453 RANGAP1P46060 587 aaPredicted RBP23.14■■□□□ 1.29
SLC29A4-203ENST00000406453 LAMC3Q9Y6N6 1575 aa23.11■■□□□ 1.29
SLC29A4-203ENST00000406453 TRIM26Q12899 539 aaPredicted RBP23.09■■□□□ 1.29
SLC29A4-203ENST00000406453 KIF27Q86VH2 1401 aa23.09■■□□□ 1.29
SLC29A4-203ENST00000406453 CUX2O14529 1486 aa23.07■■□□□ 1.28
SLC29A4-203ENST00000406453 TOPBP1Q92547 1522 aa23.04■■□□□ 1.28
SLC29A4-203ENST00000406453 RAD54L2Q9Y4B4 1467 aa23.04■■□□□ 1.28
SLC29A4-203ENST00000406453 TTBK1Q5TCY1 1321 aaPredicted RBP23.03■■□□□ 1.28
SLC29A4-203ENST00000406453 DNMBPQ6XZF7 1577 aa23.02■■□□□ 1.28
SLC29A4-203ENST00000406453 PRXQ9BXM0 1461 aa23.02■■□□□ 1.28
SLC29A4-203ENST00000406453 KIF21AQ7Z4S6 1674 aa23.01■■□□□ 1.27
SLC29A4-203ENST00000406453 URB2Q14146 1524 aaKnown RBP23.01■■□□□ 1.27
SLC29A4-203ENST00000406453 POLA1P09884 1462 aaPredicted RBP22.98■■□□□ 1.27
SLC29A4-203ENST00000406453 PDS5BQ9NTI5 1447 aa22.96■■□□□ 1.27
SLC29A4-203ENST00000406453 IGF1RP08069 1367 aa22.95■■□□□ 1.26
SLC29A4-203ENST00000406453 CLIP1P30622 1438 aa22.95■■□□□ 1.26
SLC29A4-203ENST00000406453 ERICH3Q5RHP9 1530 aa22.9■■□□□ 1.26
SLC29A4-203ENST00000406453 ABCA10Q8WWZ4 1543 aa22.83■■□□□ 1.25
SLC29A4-203ENST00000406453 CARMIL1Q5VZK9 1371 aa22.82■■□□□ 1.24
SLC29A4-203ENST00000406453 TDRD9Q8NDG6 1382 aaKnown RBP22.81■■□□□ 1.24
SLC29A4-203ENST00000406453 HRCP23327 699 aa22.81■■□□□ 1.24
SLC29A4-203ENST00000406453 WDR97A6NE52 1622 aa22.74■■□□□ 1.23
SLC29A4-203ENST00000406453 VPS8Q8N3P4 1428 aa22.72■■□□□ 1.23
SLC29A4-203ENST00000406453 ARAP1Q96P48 1450 aa22.7■■□□□ 1.22
SLC29A4-203ENST00000406453 MRC2Q9UBG0 1479 aa22.69■■□□□ 1.22
SLC29A4-203ENST00000406453 TARBP1Q13395 1621 aaKnown RBP22.65■■□□□ 1.22
SLC29A4-203ENST00000406453 ARHGAP35Q9NRY4 1499 aa22.64■■□□□ 1.22
SLC29A4-203ENST00000406453 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.21
SLC29A4-203ENST00000406453 GAPVD1Q14C86 1478 aa22.64■■□□□ 1.21
SLC29A4-203ENST00000406453 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
SLC29A4-203ENST00000406453 AQRO60306 1485 aaKnown RBP eCLIP22.6■■□□□ 1.215e-7■■■■■ 31.4
SLC29A4-203ENST00000406453 P3H3Q8IVL6 736 aa22.59■■□□□ 1.21
SLC29A4-203ENST00000406453 CUL7Q14999 1698 aa22.56■■□□□ 1.2
SLC29A4-203ENST00000406453 APLP2Q06481 763 aa22.55■■□□□ 1.2
SLC29A4-203ENST00000406453 ZNF608Q9ULD9 1512 aaPredicted RBP22.54■■□□□ 1.2
SLC29A4-203ENST00000406453 WDR62O43379 1518 aa22.53■■□□□ 1.2
SLC29A4-203ENST00000406453 KANK4Q5T7N3 995 aaPredicted RBP22.5■■□□□ 1.19
SLC29A4-203ENST00000406453 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms