RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 CTTNBP2Q8WZ74 1663 aa27.68■■■□□ 2.02
CLDND1-204ENST00000394185 P3H3Q8IVL6 736 aa27.67■■■□□ 2.02
CLDND1-204ENST00000394185 GRIN2BQ13224 1484 aa27.67■■■□□ 2.02
CLDND1-204ENST00000394185 ADAMTS12P58397 1594 aa27.63■■■□□ 2.01
CLDND1-204ENST00000394185 FHAD1B1AJZ9 1412 aa27.63■■■□□ 2.01
CLDND1-204ENST00000394185 EIF4G3O43432 1585 aaKnown RBP27.62■■■□□ 2.01
CLDND1-204ENST00000394185 FHOD3Q2V2M9 1422 aa27.59■■■□□ 2.01
CLDND1-204ENST00000394185 KANK4Q5T7N3 995 aaPredicted RBP27.59■■■□□ 2.01
CLDND1-204ENST00000394185 SNAPC4Q5SXM2 1469 aa27.54■■■□□ 2
CLDND1-204ENST00000394185 EFCAB5A4FU69 1503 aa27.52■■■□□ 2
CLDND1-204ENST00000394185 PCF11O94913 1555 aaKnown RBP27.46■■□□□ 1.99
CLDND1-204ENST00000394185 SAMD9Q5K651 1589 aa27.44■■□□□ 1.98
CLDND1-204ENST00000394185 ATP1B4Q9UN42 357 aaPredicted RBP27.39■■□□□ 1.98
CLDND1-204ENST00000394185 TIAM1Q13009 1591 aa27.39■■□□□ 1.97
CLDND1-204ENST00000394185 IQGAP2Q13576 1575 aa27.38■■□□□ 1.97
CLDND1-204ENST00000394185 GRIN2AQ12879 1464 aa27.37■■□□□ 1.97
CLDND1-204ENST00000394185 MAGI1Q96QZ7 1491 aaPredicted RBP27.36■■□□□ 1.97
CLDND1-204ENST00000394185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.35■■□□□ 1.97
CLDND1-204ENST00000394185 CASKIN1Q8WXD9 1431 aa27.33■■□□□ 1.97
CLDND1-204ENST00000394185 FYCO1Q9BQS8 1478 aa27.32■■□□□ 1.96
CLDND1-204ENST00000394185 FMN1Q68DA7 1419 aa27.32■■□□□ 1.96
CLDND1-204ENST00000394185 MAP3K1Q13233 1512 aa27.32■■□□□ 1.96
CLDND1-204ENST00000394185 HNRNPUL2Q1KMD3 747 aaKnown RBP27.32■■□□□ 1.96
CLDND1-204ENST00000394185 FBLN2P98095 1184 aa27.31■■□□□ 1.96
CLDND1-204ENST00000394185 CHMP7Q8WUX9 453 aaPredicted RBP27.31■■□□□ 1.96
CLDND1-204ENST00000394185 SYNJ2O15056 1496 aa27.3■■□□□ 1.96
CLDND1-204ENST00000394185 LRRC9Q6ZRR7 1453 aa27.28■■□□□ 1.96
CLDND1-204ENST00000394185 KIAA0586Q9BVV6 1533 aa27.26■■□□□ 1.96
CLDND1-204ENST00000394185 CFAP43Q8NDM7 1665 aa27.26■■□□□ 1.96
CLDND1-204ENST00000394185 CEP170Q5SW79 1584 aa27.24■■□□□ 1.95
CLDND1-204ENST00000394185 UGGT2Q9NYU1 1516 aa27.23■■□□□ 1.95
CLDND1-204ENST00000394185 RRBP1Q9P2E9 1410 aaKnown RBP27.19■■□□□ 1.94
CLDND1-204ENST00000394185 CCER1Q8TC90 406 aaPredicted RBP27.18■■□□□ 1.94
CLDND1-204ENST00000394185 LRRIQ1Q96JM4 1722 aa27.18■■□□□ 1.94
CLDND1-204ENST00000394185 DISP1Q96F81 1524 aa27.16■■□□□ 1.94
CLDND1-204ENST00000394185 ZEB1P37275 1124 aaPredicted RBP27.14■■□□□ 1.94
CLDND1-204ENST00000394185 PHLDB1Q86UU1 1377 aa27.14■■□□□ 1.94
CLDND1-204ENST00000394185 NUP160Q12769 1436 aa27.13■■□□□ 1.93
CLDND1-204ENST00000394185 CCNB3Q8WWL7 1395 aa27.12■■□□□ 1.93
CLDND1-204ENST00000394185 KIAA0556O60303 1618 aa27.11■■□□□ 1.93
CLDND1-204ENST00000394185 ARID3CA6NKF2 412 aa27.02■■□□□ 1.92
CLDND1-204ENST00000394185 MTUS2Q5JR59 1369 aa27.02■■□□□ 1.92
CLDND1-204ENST00000394185 JPH4Q96JJ6 628 aa27.02■■□□□ 1.92
CLDND1-204ENST00000394185 ITGAEP38570 1179 aa27■■□□□ 1.91
CLDND1-204ENST00000394185 HECW1Q76N89 1606 aa27■■□□□ 1.91
CLDND1-204ENST00000394185 MAGI3Q5TCQ9 1506 aa26.99■■□□□ 1.91
CLDND1-204ENST00000394185 EPRSP07814 1512 aaKnown RBP26.98■■□□□ 1.91
CLDND1-204ENST00000394185 CDK13Q14004 1512 aaKnown RBP26.97■■□□□ 1.91
CLDND1-204ENST00000394185 CHD1O14646 1710 aa26.96■■□□□ 1.91
CLDND1-204ENST00000394185 CCDC18Q5T9S5 1454 aa26.95■■□□□ 1.91
CLDND1-204ENST00000394185 FAM50AQ14320 339 aaKnown RBP26.92■■□□□ 1.9
CLDND1-204ENST00000394185 EHBP1L1Q8N3D4 1523 aa26.9■■□□□ 1.9
CLDND1-204ENST00000394185 NCOA2Q15596 1464 aa26.9■■□□□ 1.9
CLDND1-204ENST00000394185 NUP153P49790 1475 aaKnown RBP26.89■■□□□ 1.9
CLDND1-204ENST00000394185 CARMIL2Q6F5E8 1435 aa26.88■■□□□ 1.89
CLDND1-204ENST00000394185 PLB1Q6P1J6 1458 aa26.87■■□□□ 1.89
CLDND1-204ENST00000394185 RAPGEF6Q8TEU7 1601 aa26.87■■□□□ 1.89
CLDND1-204ENST00000394185 FGD6Q6ZV73 1430 aa26.84■■□□□ 1.89
CLDND1-204ENST00000394185 SUPT6HQ7KZ85 1726 aaKnown RBP26.84■■□□□ 1.89
CLDND1-204ENST00000394185 PRG4Q92954 1404 aaPredicted RBP26.81■■□□□ 1.88
CLDND1-204ENST00000394185 ARHGEF11O15085 1522 aa26.8■■□□□ 1.88
CLDND1-204ENST00000394185 MYOM3Q5VTT5 1437 aa26.78■■□□□ 1.88
CLDND1-204ENST00000394185 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.73■■□□□ 1.87
CLDND1-204ENST00000394185 DHX57Q6P158 1386 aaKnown RBP26.72■■□□□ 1.87
CLDND1-204ENST00000394185 RAB3GAP2Q9H2M9 1393 aa26.7■■□□□ 1.86
CLDND1-204ENST00000394185 ABCA8O94911 1581 aa26.69■■□□□ 1.86
CLDND1-204ENST00000394185 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
CLDND1-204ENST00000394185 ERCC6L2Q5T890 1561 aa26.67■■□□□ 1.86
CLDND1-204ENST00000394185 PTPRKQ15262 1439 aa26.66■■□□□ 1.86
CLDND1-204ENST00000394185 PTPN23Q9H3S7 1636 aa26.65■■□□□ 1.86
CLDND1-204ENST00000394185 PTPRGP23470 1445 aa26.65■■□□□ 1.86
CLDND1-204ENST00000394185 SETD5Q9C0A6 1442 aa26.64■■□□□ 1.86
CLDND1-204ENST00000394185 CDK11AQ9UQ88 783 aaPredicted RBP26.62■■□□□ 1.85
CLDND1-204ENST00000394185 CLASP1Q7Z460 1538 aa26.61■■□□□ 1.85
CLDND1-204ENST00000394185 TROQ12816 1431 aaPredicted RBP26.59■■□□□ 1.85
CLDND1-204ENST00000394185 ATP10BO94823 1461 aa26.59■■□□□ 1.85
CLDND1-204ENST00000394185 TCOF1Q13428 1488 aaKnown RBP26.57■■□□□ 1.84
CLDND1-204ENST00000394185 KIF14Q15058 1648 aa26.55■■□□□ 1.84
CLDND1-204ENST00000394185 MIA2Q96PC5 1412 aa26.54■■□□□ 1.84
CLDND1-204ENST00000394185 ZNF644Q9H582 1327 aaPredicted RBP26.5■■□□□ 1.83
CLDND1-204ENST00000394185 UACAQ9BZF9 1416 aa26.49■■□□□ 1.83
CLDND1-204ENST00000394185 CLSPNQ9HAW4 1339 aa26.48■■□□□ 1.83
CLDND1-204ENST00000394185 PLEKHD1A6NEE1 506 aa26.47■■□□□ 1.83
CLDND1-204ENST00000394185 CHIC2Q9UKJ5 165 aa26.47■■□□□ 1.83
CLDND1-204ENST00000394185 ADCY10Q96PN6 1610 aa26.47■■□□□ 1.83
CLDND1-204ENST00000394185 HFM1A2PYH4 1435 aa26.46■■□□□ 1.83
CLDND1-204ENST00000394185 MAPKBP1O60336 1514 aa26.44■■□□□ 1.82
CLDND1-204ENST00000394185 GPATCH8Q9UKJ3 1502 aaKnown RBP26.44■■□□□ 1.82
CLDND1-204ENST00000394185 NAIPQ13075 1403 aa26.43■■□□□ 1.82
CLDND1-204ENST00000394185 RRP7BPQ9NSQ0 103 aa26.41■■□□□ 1.82
CLDND1-204ENST00000394185 CFDP1Q9UEE9 299 aaPredicted RBP26.39■■□□□ 1.82
CLDND1-204ENST00000394185 ABCC2Q92887 1545 aa26.38■■□□□ 1.81
CLDND1-204ENST00000394185 ABCC10Q5T3U5 1492 aa26.37■■□□□ 1.81
CLDND1-204ENST00000394185 DAPK1P53355 1430 aa26.36■■□□□ 1.81
CLDND1-204ENST00000394185 ZNF777Q9ULD5 760 aaPredicted RBP26.35■■□□□ 1.81
CLDND1-204ENST00000394185 ITSN2Q9NZM3 1697 aa26.35■■□□□ 1.81
CLDND1-204ENST00000394185 ABCC5O15440 1437 aa26.35■■□□□ 1.81
CLDND1-204ENST00000394185 CAMSAP2Q08AD1 1489 aa26.34■■□□□ 1.81
CLDND1-204ENST00000394185 DNMT1P26358 1616 aaKnown RBP26.32■■□□□ 1.8
CLDND1-204ENST00000394185 CDC42BPAQ5VT25 1732 aa26.31■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms