RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 NISCHQ9Y2I1 1504 aa39.98■■■■□ 3.99
CLDND1-204ENST00000394185 CCDC180Q9P1Z9 1646 aa34.57■■■■□ 3.12
CLDND1-204ENST00000394185 ZCCHC6Q5VYS8 1495 aaKnown RBP33.64■■■□□ 2.98
CLDND1-204ENST00000394185 DCAF8L2P0C7V8 631 aa33.2■■■□□ 2.9
CLDND1-204ENST00000394185 SHROOM4Q9ULL8 1493 aa33.12■■■□□ 2.89
CLDND1-204ENST00000394185 DCAF1Q9Y4B6 1507 aa32.9■■■□□ 2.86
CLDND1-204ENST00000394185 ABCC9O60706 1549 aa32.76■■■□□ 2.83
CLDND1-204ENST00000394185 MYO15BQ96JP2 1530 aa32.37■■■□□ 2.77
CLDND1-204ENST00000394185 NACADO15069 1562 aa32.17■■■□□ 2.74
CLDND1-204ENST00000394185 SCRIBQ14160 1630 aa32.1■■■□□ 2.73
CLDND1-204ENST00000394185 SUPT5HO00267 1087 aaKnown RBP31.96■■■□□ 2.71
CLDND1-204ENST00000394185 RB1CC1Q8TDY2 1594 aa31.86■■■□□ 2.69
CLDND1-204ENST00000394185 UNC13AQ9UPW8 1703 aa31.34■■■□□ 2.61
CLDND1-204ENST00000394185 CECR2Q9BXF3 1484 aa31.2■■■□□ 2.59
CLDND1-204ENST00000394185 RSF1Q96T23 1441 aaPredicted RBP31.2■■■□□ 2.59
CLDND1-204ENST00000394185 PABPN1Q86U42 306 aaKnown RBP eCLIP31.05■■■□□ 2.56
CLDND1-204ENST00000394185 BICRAQ9NZM4 1560 aa31.03■■■□□ 2.56
CLDND1-204ENST00000394185 MROH2BQ7Z745 1585 aa31■■■□□ 2.55
CLDND1-204ENST00000394185 BAZ1AQ9NRL2 1556 aaPredicted RBP30.8■■■□□ 2.52
CLDND1-204ENST00000394185 WIZO95785 1651 aa30.77■■■□□ 2.52
CLDND1-204ENST00000394185 SMARCA4P51532 1647 aa30.67■■■□□ 2.5
CLDND1-204ENST00000394185 CHIC1Q5VXU3 224 aa30.65■■■□□ 2.5
CLDND1-204ENST00000394185 TOP2AP11388 1531 aaKnown RBP30.33■■■□□ 2.45
CLDND1-204ENST00000394185 PEG3Q9GZU2 1588 aa30.21■■■□□ 2.43
CLDND1-204ENST00000394185 ATAD2BQ9ULI0 1458 aa30.13■■■□□ 2.41
CLDND1-204ENST00000394185 CCDC88BA6NC98 1476 aa30.12■■■□□ 2.41
CLDND1-204ENST00000394185 SMARCA2P51531 1590 aa30.11■■■□□ 2.41
CLDND1-204ENST00000394185 EIF4G1Q04637 1599 aaKnown RBP30.04■■■□□ 2.4
CLDND1-204ENST00000394185 BAZ1BQ9UIG0 1483 aaKnown RBP29.97■■■□□ 2.39
CLDND1-204ENST00000394185 TRIM41Q8WV44 630 aa29.9■■■□□ 2.38
CLDND1-204ENST00000394185 NCAPD3P42695 1498 aa29.76■■■□□ 2.35
CLDND1-204ENST00000394185 HMGXB3Q12766 1538 aa29.7■■■□□ 2.34
CLDND1-204ENST00000394185 ABCC8Q09428 1581 aa29.67■■■□□ 2.34
CLDND1-204ENST00000394185 LOC105371045A0A1W2PR82 267 aa29.63■■■□□ 2.33
CLDND1-204ENST00000394185 CC2D2AQ9P2K1 1620 aa29.56■■■□□ 2.32
CLDND1-204ENST00000394185 FAM9AQ8IZU1 332 aaPredicted RBP29.54■■■□□ 2.32
CLDND1-204ENST00000394185 WRNQ14191 1432 aaPredicted RBP eCLIP29.32■■■□□ 2.28
CLDND1-204ENST00000394185 EHMT2Q96KQ7 1210 aa29.26■■■□□ 2.27
CLDND1-204ENST00000394185 SYNJ1O43426 1573 aa29.25■■■□□ 2.27
CLDND1-204ENST00000394185 CFTRP13569 1480 aa29.21■■■□□ 2.27
CLDND1-204ENST00000394185 SOGA1O94964 1423 aa29.18■■■□□ 2.26
CLDND1-204ENST00000394185 RUSC2Q8N2Y8 1516 aa29.09■■■□□ 2.25
CLDND1-204ENST00000394185 CADPSQ9ULU8 1353 aa29.06■■■□□ 2.24
CLDND1-204ENST00000394185 DNAJC5BQ9UF47 199 aa29.04■■■□□ 2.24
CLDND1-204ENST00000394185 TOP2BQ02880 1626 aa29■■■□□ 2.23
CLDND1-204ENST00000394185 PRDM2Q13029 1718 aa28.95■■■□□ 2.22
CLDND1-204ENST00000394185 CUX1P39880 1505 aa28.95■■■□□ 2.22
CLDND1-204ENST00000394185 BIVM-ERCC5R4GMW8 1640 aa28.93■■■□□ 2.22
CLDND1-204ENST00000394185 EEA1Q15075 1411 aa28.89■■■□□ 2.22
CLDND1-204ENST00000394185 CSRNP3Q8WYN3 585 aa28.88■■■□□ 2.21
CLDND1-204ENST00000394185 NESP48681 1621 aa28.88■■■□□ 2.21
CLDND1-204ENST00000394185 FANCD2Q9BXW9 1451 aa28.77■■■□□ 2.2
CLDND1-204ENST00000394185 LAMC3Q9Y6N6 1575 aa28.66■■■□□ 2.18
CLDND1-204ENST00000394185 GOLGA3Q08378 1498 aa28.62■■■□□ 2.17
CLDND1-204ENST00000394185 UBTFP17480 764 aaKnown RBP28.61■■■□□ 2.17
CLDND1-204ENST00000394185 TNIKQ9UKE5 1360 aa28.59■■■□□ 2.17
CLDND1-204ENST00000394185 CEP164Q9UPV0 1460 aa28.58■■■□□ 2.17
CLDND1-204ENST00000394185 FGD5Q6ZNL6 1462 aa28.57■■■□□ 2.16
CLDND1-204ENST00000394185 KIF21BO75037 1637 aa28.57■■■□□ 2.16
CLDND1-204ENST00000394185 CEP162Q5TB80 1403 aa28.54■■■□□ 2.16
CLDND1-204ENST00000394185 RAPGEF2Q9Y4G8 1499 aa28.53■■■□□ 2.16
CLDND1-204ENST00000394185 PCGF6Q9BYE7 350 aa28.52■■■□□ 2.16
CLDND1-204ENST00000394185 KIF27Q86VH2 1401 aa28.51■■■□□ 2.15
CLDND1-204ENST00000394185 DNMBPQ6XZF7 1577 aa28.49■■■□□ 2.15
CLDND1-204ENST00000394185 TOPBP1Q92547 1522 aa28.49■■■□□ 2.15
CLDND1-204ENST00000394185 PDS5BQ9NTI5 1447 aa28.46■■■□□ 2.15
CLDND1-204ENST00000394185 CUX2O14529 1486 aa28.45■■■□□ 2.15
CLDND1-204ENST00000394185 URB2Q14146 1524 aaKnown RBP28.44■■■□□ 2.14
CLDND1-204ENST00000394185 PRXQ9BXM0 1461 aa28.42■■■□□ 2.14
CLDND1-204ENST00000394185 KIF21AQ7Z4S6 1674 aa28.42■■■□□ 2.14
CLDND1-204ENST00000394185 POLA1P09884 1462 aaPredicted RBP28.4■■■□□ 2.14
CLDND1-204ENST00000394185 RAD54L2Q9Y4B4 1467 aa28.39■■■□□ 2.14
CLDND1-204ENST00000394185 ERICH3Q5RHP9 1530 aa28.31■■■□□ 2.12
CLDND1-204ENST00000394185 IGF1RP08069 1367 aa28.31■■■□□ 2.12
CLDND1-204ENST00000394185 PPARGC1BQ86YN6 1023 aaKnown RBP28.31■■■□□ 2.12
CLDND1-204ENST00000394185 TRIM26Q12899 539 aaPredicted RBP28.28■■■□□ 2.12
CLDND1-204ENST00000394185 RANGAP1P46060 587 aaPredicted RBP28.26■■■□□ 2.11
CLDND1-204ENST00000394185 ABCA10Q8WWZ4 1543 aa28.25■■■□□ 2.11
CLDND1-204ENST00000394185 CLIP1P30622 1438 aa28.23■■■□□ 2.11
CLDND1-204ENST00000394185 CARMIL1Q5VZK9 1371 aa28.15■■■□□ 2.1
CLDND1-204ENST00000394185 WDR97A6NE52 1622 aa28.13■■■□□ 2.09
CLDND1-204ENST00000394185 MRC2Q9UBG0 1479 aa28.11■■■□□ 2.09
CLDND1-204ENST00000394185 TDRD9Q8NDG6 1382 aaKnown RBP28.1■■■□□ 2.09
CLDND1-204ENST00000394185 TTBK1Q5TCY1 1321 aaPredicted RBP28.04■■■□□ 2.08
CLDND1-204ENST00000394185 TARBP1Q13395 1621 aaKnown RBP28.02■■■□□ 2.08
CLDND1-204ENST00000394185 ABCA5Q8WWZ7 1642 aa28.01■■■□□ 2.07
CLDND1-204ENST00000394185 VPS8Q8N3P4 1428 aa27.99■■■□□ 2.07
CLDND1-204ENST00000394185 ERCC6Q03468 1493 aa27.97■■■□□ 2.07
CLDND1-204ENST00000394185 GAPVD1Q14C86 1478 aa27.97■■■□□ 2.07
CLDND1-204ENST00000394185 ARAP1Q96P48 1450 aa27.95■■■□□ 2.06
CLDND1-204ENST00000394185 WDR62O43379 1518 aa27.95■■■□□ 2.06
CLDND1-204ENST00000394185 CUL7Q14999 1698 aa27.91■■■□□ 2.06
CLDND1-204ENST00000394185 ARHGAP35Q9NRY4 1499 aa27.89■■■□□ 2.06
CLDND1-204ENST00000394185 AQRO60306 1485 aaKnown RBP eCLIP27.86■■■□□ 2.051e-6■■■■□ 26.1
CLDND1-204ENST00000394185 THOC2Q8NI27 1593 aaKnown RBP27.83■■■□□ 2.05
CLDND1-204ENST00000394185 HRCP23327 699 aa27.82■■■□□ 2.04
CLDND1-204ENST00000394185 ZNF608Q9ULD9 1512 aaPredicted RBP27.81■■■□□ 2.04
CLDND1-204ENST00000394185 IFT140Q96RY7 1462 aa27.78■■■□□ 2.04
CLDND1-204ENST00000394185 PBRM1Q86U86 1689 aa27.75■■■□□ 2.03
CLDND1-204ENST00000394185 APLP2Q06481 763 aa27.7■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms