RNA–Protein interactions for RNA: ENST00000392035.6

C19orf47-202, Transcript of chromosome 19 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C19orf47, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-202ENST00000392035 ADAMTS12P58397 1594 aa38.14■■■■□ 3.7
C19orf47-202ENST00000392035 EIF4G3O43432 1585 aaKnown RBP38.12■■■■□ 3.69
C19orf47-202ENST00000392035 TTBK1Q5TCY1 1321 aaPredicted RBP38.11■■■■□ 3.69
C19orf47-202ENST00000392035 APLP2Q06481 763 aa38.06■■■■□ 3.68
C19orf47-202ENST00000392035 EFCAB5A4FU69 1503 aa38■■■■□ 3.67
C19orf47-202ENST00000392035 SNAPC4Q5SXM2 1469 aa37.95■■■■□ 3.67
C19orf47-202ENST00000392035 P3H3Q8IVL6 736 aa37.88■■■■□ 3.65
C19orf47-202ENST00000392035 FHOD3Q2V2M9 1422 aa37.86■■■■□ 3.65
C19orf47-202ENST00000392035 MAGI1Q96QZ7 1491 aaPredicted RBP37.85■■■■□ 3.65
C19orf47-202ENST00000392035 HRCP23327 699 aa37.84■■■■□ 3.65
C19orf47-202ENST00000392035 SAMD9Q5K651 1589 aa37.83■■■■□ 3.65
C19orf47-202ENST00000392035 IQGAP2Q13576 1575 aa37.77■■■■□ 3.64
C19orf47-202ENST00000392035 GRIN2AQ12879 1464 aa37.77■■■■□ 3.64
C19orf47-202ENST00000392035 PCF11O94913 1555 aaKnown RBP37.73■■■■□ 3.63
C19orf47-202ENST00000392035 KANK4Q5T7N3 995 aaPredicted RBP37.72■■■■□ 3.63
C19orf47-202ENST00000392035 SYNJ2O15056 1496 aa37.72■■■■□ 3.63
C19orf47-202ENST00000392035 MAP3K1Q13233 1512 aa37.69■■■■□ 3.62
C19orf47-202ENST00000392035 FMN1Q68DA7 1419 aa37.66■■■■□ 3.62
C19orf47-202ENST00000392035 TIAM1Q13009 1591 aa37.66■■■■□ 3.62
C19orf47-202ENST00000392035 FYCO1Q9BQS8 1478 aa37.64■■■■□ 3.62
C19orf47-202ENST00000392035 KIAA0586Q9BVV6 1533 aa37.64■■■■□ 3.62
C19orf47-202ENST00000392035 CHMP7Q8WUX9 453 aaPredicted RBP37.63■■■■□ 3.61
C19orf47-202ENST00000392035 CASKIN1Q8WXD9 1431 aa37.63■■■■□ 3.61
C19orf47-202ENST00000392035 UGGT2Q9NYU1 1516 aa37.58■■■■□ 3.61
C19orf47-202ENST00000392035 CFAP43Q8NDM7 1665 aa37.56■■■■□ 3.6
C19orf47-202ENST00000392035 CEP170Q5SW79 1584 aa37.54■■■■□ 3.6
C19orf47-202ENST00000392035 FBLN2P98095 1184 aa37.53■■■■□ 3.6
C19orf47-202ENST00000392035 ATP1B4Q9UN42 357 aaPredicted RBP37.51■■■■□ 3.6
C19orf47-202ENST00000392035 LRRC9Q6ZRR7 1453 aa37.48■■■■□ 3.59
C19orf47-202ENST00000392035 NUP160Q12769 1436 aa37.46■■■■□ 3.59
C19orf47-202ENST00000392035 DISP1Q96F81 1524 aa37.4■■■■□ 3.58
C19orf47-202ENST00000392035 KIAA0556O60303 1618 aa37.39■■■■□ 3.58
C19orf47-202ENST00000392035 LRRIQ1Q96JM4 1722 aa37.36■■■■□ 3.57
C19orf47-202ENST00000392035 RRBP1Q9P2E9 1410 aaKnown RBP37.34■■■■□ 3.57
C19orf47-202ENST00000392035 HNRNPUL2Q1KMD3 747 aaKnown RBP37.28■■■■□ 3.56
C19orf47-202ENST00000392035 CHD1O14646 1710 aa37.26■■■■□ 3.56
C19orf47-202ENST00000392035 HECW1Q76N89 1606 aa37.25■■■■□ 3.55
C19orf47-202ENST00000392035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.22■■■■□ 3.55
C19orf47-202ENST00000392035 JPH4Q96JJ6 628 aa37.22■■■■□ 3.55
C19orf47-202ENST00000392035 CCNB3Q8WWL7 1395 aa37.2■■■■□ 3.55
C19orf47-202ENST00000392035 ZEB1P37275 1124 aaPredicted RBP37.2■■■■□ 3.55
C19orf47-202ENST00000392035 CCDC18Q5T9S5 1454 aa37.19■■■■□ 3.54
C19orf47-202ENST00000392035 PHLDB1Q86UU1 1377 aa37.18■■■■□ 3.54
C19orf47-202ENST00000392035 MTUS2Q5JR59 1369 aa37.15■■■■□ 3.54
C19orf47-202ENST00000392035 CARMIL2Q6F5E8 1435 aa37.14■■■■□ 3.54
C19orf47-202ENST00000392035 EPRSP07814 1512 aaKnown RBP37.12■■■■□ 3.53
C19orf47-202ENST00000392035 CCER1Q8TC90 406 aaPredicted RBP37.1■■■■□ 3.53
C19orf47-202ENST00000392035 EHBP1L1Q8N3D4 1523 aa37.07■■■■□ 3.53
C19orf47-202ENST00000392035 RAPGEF6Q8TEU7 1601 aa37.06■■■■□ 3.52
C19orf47-202ENST00000392035 CDK13Q14004 1512 aaKnown RBP37.03■■■■□ 3.52
C19orf47-202ENST00000392035 MAGI3Q5TCQ9 1506 aa37.03■■■■□ 3.52
C19orf47-202ENST00000392035 SUPT6HQ7KZ85 1726 aaKnown RBP37■■■■□ 3.51
C19orf47-202ENST00000392035 NUP153P49790 1475 aaKnown RBP36.99■■■■□ 3.51
C19orf47-202ENST00000392035 NCOA2Q15596 1464 aa36.96■■■■□ 3.51
C19orf47-202ENST00000392035 PRG4Q92954 1404 aaPredicted RBP36.95■■■■□ 3.5
C19orf47-202ENST00000392035 PLB1Q6P1J6 1458 aa36.93■■■■□ 3.5
C19orf47-202ENST00000392035 ARID3CA6NKF2 412 aa36.93■■■■□ 3.5
C19orf47-202ENST00000392035 SHROOM2Q13796 1616 aa36.91■■■■□ 3.5
C19orf47-202ENST00000392035 ARHGEF11O15085 1522 aa36.89■■■■□ 3.5
C19orf47-202ENST00000392035 FGD6Q6ZV73 1430 aa36.88■■■■□ 3.49
C19orf47-202ENST00000392035 FAM50AQ14320 339 aaKnown RBP36.86■■■■□ 3.49
C19orf47-202ENST00000392035 ITGAEP38570 1179 aa36.86■■■■□ 3.49
C19orf47-202ENST00000392035 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.85■■■■□ 3.49
C19orf47-202ENST00000392035 MYOM3Q5VTT5 1437 aa36.83■■■■□ 3.49
C19orf47-202ENST00000392035 ABCA8O94911 1581 aa36.82■■■■□ 3.49
C19orf47-202ENST00000392035 CLASP1Q7Z460 1538 aa36.79■■■■□ 3.48
C19orf47-202ENST00000392035 PTPRGP23470 1445 aa36.75■■■■□ 3.47
C19orf47-202ENST00000392035 CDK11AQ9UQ88 783 aaPredicted RBP36.74■■■■□ 3.47
C19orf47-202ENST00000392035 ERCC6L2Q5T890 1561 aa36.68■■■■□ 3.46
C19orf47-202ENST00000392035 PTPN23Q9H3S7 1636 aa36.66■■■■□ 3.46
C19orf47-202ENST00000392035 TROQ12816 1431 aaPredicted RBP36.64■■■■□ 3.46
C19orf47-202ENST00000392035 ATP10BO94823 1461 aa36.61■■■■□ 3.45
C19orf47-202ENST00000392035 MIA2Q96PC5 1412 aa36.59■■■■□ 3.45
C19orf47-202ENST00000392035 TCOF1Q13428 1488 aaKnown RBP36.59■■■■□ 3.45
C19orf47-202ENST00000392035 SETD5Q9C0A6 1442 aa36.56■■■■□ 3.44
C19orf47-202ENST00000392035 RAB3GAP2Q9H2M9 1393 aa36.56■■■■□ 3.44
C19orf47-202ENST00000392035 DHX57Q6P158 1386 aaKnown RBP36.56■■■■□ 3.44
C19orf47-202ENST00000392035 ADCY10Q96PN6 1610 aa36.55■■■■□ 3.44
C19orf47-202ENST00000392035 UACAQ9BZF9 1416 aa36.55■■■■□ 3.44
C19orf47-202ENST00000392035 PTPRKQ15262 1439 aa36.5■■■■□ 3.43
C19orf47-202ENST00000392035 KIF14Q15058 1648 aa36.49■■■■□ 3.43
C19orf47-202ENST00000392035 PLEKHD1A6NEE1 506 aa36.47■■■■□ 3.43
C19orf47-202ENST00000392035 CLSPNQ9HAW4 1339 aa36.43■■■■□ 3.42
C19orf47-202ENST00000392035 ABCC2Q92887 1545 aa36.42■■■■□ 3.42
C19orf47-202ENST00000392035 ITSN2Q9NZM3 1697 aa36.4■■■■□ 3.42
C19orf47-202ENST00000392035 GPATCH8Q9UKJ3 1502 aaKnown RBP36.36■■■■□ 3.41
C19orf47-202ENST00000392035 HFM1A2PYH4 1435 aa36.35■■■■□ 3.41
C19orf47-202ENST00000392035 ABCC10Q5T3U5 1492 aa36.32■■■■□ 3.4
C19orf47-202ENST00000392035 OSCARQ8IYS5 282 aa36.29■■■■□ 3.4
C19orf47-202ENST00000392035 UHRF1BP1LA0JNW5 1464 aa36.29■■■■□ 3.4
C19orf47-202ENST00000392035 CFDP1Q9UEE9 299 aaPredicted RBP36.28■■■■□ 3.4
C19orf47-202ENST00000392035 ZNF644Q9H582 1327 aaPredicted RBP36.28■■■■□ 3.4
C19orf47-202ENST00000392035 NAIPQ13075 1403 aa36.27■■■■□ 3.4
C19orf47-202ENST00000392035 CDC42BPAQ5VT25 1732 aa36.27■■■■□ 3.4
C19orf47-202ENST00000392035 DNMT1P26358 1616 aaKnown RBP36.25■■■■□ 3.39
C19orf47-202ENST00000392035 CAMSAP2Q08AD1 1489 aa36.24■■■■□ 3.39
C19orf47-202ENST00000392035 DAPK1P53355 1430 aa36.23■■■■□ 3.39
C19orf47-202ENST00000392035 CHIC2Q9UKJ5 165 aa36.22■■■■□ 3.39
C19orf47-202ENST00000392035 AKNAQ7Z591 1439 aa36.2■■■■□ 3.39
C19orf47-202ENST00000392035 ZCCHC11Q5TAX3 1644 aaKnown RBP36.19■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms