RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 VPS8Q8N3P4 1428 aa19.13■□□□□ 0.65
SPTBN1-203ENST00000389980 PCGF6Q9BYE7 350 aa19.1■□□□□ 0.65
SPTBN1-203ENST00000389980 P3H3Q8IVL6 736 aa19.1■□□□□ 0.65
SPTBN1-203ENST00000389980 MAGI1Q96QZ7 1491 aaPredicted RBP19.1■□□□□ 0.65
SPTBN1-203ENST00000389980 FBLN2P98095 1184 aa19.09■□□□□ 0.65
SPTBN1-203ENST00000389980 TTBK1Q5TCY1 1321 aaPredicted RBP19.08■□□□□ 0.65
SPTBN1-203ENST00000389980 CHMP7Q8WUX9 453 aaPredicted RBP19.07■□□□□ 0.64
SPTBN1-203ENST00000389980 GRIN2AQ12879 1464 aa19.06■□□□□ 0.64
SPTBN1-203ENST00000389980 SYNJ2O15056 1496 aa19.05■□□□□ 0.64
SPTBN1-203ENST00000389980 TRIM26Q12899 539 aaPredicted RBP19.03■□□□□ 0.64
SPTBN1-203ENST00000389980 FHOD3Q2V2M9 1422 aa19.01■□□□□ 0.63
SPTBN1-203ENST00000389980 IQGAP2Q13576 1575 aa19■□□□□ 0.63
SPTBN1-203ENST00000389980 EFCAB5A4FU69 1503 aa18.99■□□□□ 0.63
SPTBN1-203ENST00000389980 CEP170Q5SW79 1584 aa18.97■□□□□ 0.63
SPTBN1-203ENST00000389980 APLP2Q06481 763 aa18.96■□□□□ 0.63
SPTBN1-203ENST00000389980 SAMD9Q5K651 1589 aa18.96■□□□□ 0.63
SPTBN1-203ENST00000389980 KIAA0586Q9BVV6 1533 aa18.95■□□□□ 0.62
SPTBN1-203ENST00000389980 CHD1O14646 1710 aa18.91■□□□□ 0.62
SPTBN1-203ENST00000389980 NUP160Q12769 1436 aa18.9■□□□□ 0.62
SPTBN1-203ENST00000389980 PCF11O94913 1555 aaKnown RBP18.89■□□□□ 0.61
SPTBN1-203ENST00000389980 ATP1B4Q9UN42 357 aaPredicted RBP18.89■□□□□ 0.61
SPTBN1-203ENST00000389980 UGGT2Q9NYU1 1516 aa18.88■□□□□ 0.61
SPTBN1-203ENST00000389980 KANK4Q5T7N3 995 aaPredicted RBP18.87■□□□□ 0.61
SPTBN1-203ENST00000389980 FMN1Q68DA7 1419 aa18.85■□□□□ 0.61
SPTBN1-203ENST00000389980 DISP1Q96F81 1524 aa18.83■□□□□ 0.61
SPTBN1-203ENST00000389980 JPH4Q96JJ6 628 aa18.82■□□□□ 0.6
SPTBN1-203ENST00000389980 CASKIN1Q8WXD9 1431 aa18.81■□□□□ 0.6
SPTBN1-203ENST00000389980 KIAA0556O60303 1618 aa18.81■□□□□ 0.6
SPTBN1-203ENST00000389980 FYCO1Q9BQS8 1478 aa18.8■□□□□ 0.6
SPTBN1-203ENST00000389980 TIAM1Q13009 1591 aa18.79■□□□□ 0.6
SPTBN1-203ENST00000389980 LRRIQ1Q96JM4 1722 aa18.75■□□□□ 0.59
SPTBN1-203ENST00000389980 CFAP43Q8NDM7 1665 aa18.74■□□□□ 0.59
SPTBN1-203ENST00000389980 MAP3K1Q13233 1512 aa18.74■□□□□ 0.59
SPTBN1-203ENST00000389980 LRRC9Q6ZRR7 1453 aa18.71■□□□□ 0.59
SPTBN1-203ENST00000389980 CARMIL2Q6F5E8 1435 aa18.7■□□□□ 0.58
SPTBN1-203ENST00000389980 ARID3CA6NKF2 412 aa18.69■□□□□ 0.58
SPTBN1-203ENST00000389980 PRG4Q92954 1404 aaPredicted RBP18.69■□□□□ 0.58
SPTBN1-203ENST00000389980 HECW1Q76N89 1606 aa18.66■□□□□ 0.58
SPTBN1-203ENST00000389980 SHROOM2Q13796 1616 aa18.64■□□□□ 0.57
SPTBN1-203ENST00000389980 CLASP1Q7Z460 1538 aa18.64■□□□□ 0.57
SPTBN1-203ENST00000389980 RAPGEF6Q8TEU7 1601 aa18.63■□□□□ 0.57
SPTBN1-203ENST00000389980 PLB1Q6P1J6 1458 aa18.63■□□□□ 0.57
SPTBN1-203ENST00000389980 CDK13Q14004 1512 aaKnown RBP18.62■□□□□ 0.57
SPTBN1-203ENST00000389980 EPRSP07814 1512 aaKnown RBP18.62■□□□□ 0.57
SPTBN1-203ENST00000389980 ERCC6L2Q5T890 1561 aa18.62■□□□□ 0.57
SPTBN1-203ENST00000389980 MTUS2Q5JR59 1369 aa18.6■□□□□ 0.57
SPTBN1-203ENST00000389980 NUP153P49790 1475 aaKnown RBP18.6■□□□□ 0.57
SPTBN1-203ENST00000389980 CCDC18Q5T9S5 1454 aa18.6■□□□□ 0.57
SPTBN1-203ENST00000389980 MAGI3Q5TCQ9 1506 aa18.58■□□□□ 0.56
SPTBN1-203ENST00000389980 PHLDB1Q86UU1 1377 aa18.58■□□□□ 0.56
SPTBN1-203ENST00000389980 HRCP23327 699 aa18.57■□□□□ 0.56
SPTBN1-203ENST00000389980 HNRNPUL2Q1KMD3 747 aaKnown RBP18.57■□□□□ 0.56
SPTBN1-203ENST00000389980 PTPRGP23470 1445 aa18.56■□□□□ 0.56
SPTBN1-203ENST00000389980 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.55■□□□□ 0.56
SPTBN1-203ENST00000389980 RRBP1Q9P2E9 1410 aaKnown RBP18.55■□□□□ 0.56
SPTBN1-203ENST00000389980 ABCA8O94911 1581 aa18.53■□□□□ 0.56
SPTBN1-203ENST00000389980 EHBP1L1Q8N3D4 1523 aa18.52■□□□□ 0.56
SPTBN1-203ENST00000389980 CCNB3Q8WWL7 1395 aa18.51■□□□□ 0.55
SPTBN1-203ENST00000389980 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
SPTBN1-203ENST00000389980 NCOA2Q15596 1464 aa18.5■□□□□ 0.55
SPTBN1-203ENST00000389980 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
SPTBN1-203ENST00000389980 ITGAEP38570 1179 aa18.46■□□□□ 0.55
SPTBN1-203ENST00000389980 FAM50AQ14320 339 aaKnown RBP18.45■□□□□ 0.54
SPTBN1-203ENST00000389980 UACAQ9BZF9 1416 aa18.44■□□□□ 0.54
SPTBN1-203ENST00000389980 ATP10BO94823 1461 aa18.44■□□□□ 0.54
SPTBN1-203ENST00000389980 CDK11AQ9UQ88 783 aaPredicted RBP18.43■□□□□ 0.54
SPTBN1-203ENST00000389980 ARHGEF11O15085 1522 aa18.42■□□□□ 0.54
SPTBN1-203ENST00000389980 FGD6Q6ZV73 1430 aa18.41■□□□□ 0.54
SPTBN1-203ENST00000389980 MYOM3Q5VTT5 1437 aa18.4■□□□□ 0.54
SPTBN1-203ENST00000389980 TROQ12816 1431 aaPredicted RBP18.38■□□□□ 0.53
SPTBN1-203ENST00000389980 ABCC2Q92887 1545 aa18.37■□□□□ 0.53
SPTBN1-203ENST00000389980 PLEKHD1A6NEE1 506 aa18.36■□□□□ 0.53
SPTBN1-203ENST00000389980 KIF14Q15058 1648 aa18.36■□□□□ 0.53
SPTBN1-203ENST00000389980 CCER1Q8TC90 406 aaPredicted RBP18.32■□□□□ 0.52
SPTBN1-203ENST00000389980 PTPN23Q9H3S7 1636 aa18.32■□□□□ 0.52
SPTBN1-203ENST00000389980 ADCY10Q96PN6 1610 aa18.31■□□□□ 0.52
SPTBN1-203ENST00000389980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.3■□□□□ 0.525e-8■□□□□ 9.9
SPTBN1-203ENST00000389980 UHRF1BP1LA0JNW5 1464 aa18.29■□□□□ 0.52
SPTBN1-203ENST00000389980 ZCCHC11Q5TAX3 1644 aaKnown RBP18.28■□□□□ 0.52
SPTBN1-203ENST00000389980 MIA2Q96PC5 1412 aa18.26■□□□□ 0.51
SPTBN1-203ENST00000389980 ZNF644Q9H582 1327 aaPredicted RBP18.25■□□□□ 0.51
SPTBN1-203ENST00000389980 PTPRKQ15262 1439 aa18.25■□□□□ 0.51
SPTBN1-203ENST00000389980 KDM5BQ9UGL1 1544 aa18.25■□□□□ 0.51
SPTBN1-203ENST00000389980 TCOF1Q13428 1488 aaKnown RBP18.25■□□□□ 0.51
SPTBN1-203ENST00000389980 GPATCH8Q9UKJ3 1502 aaKnown RBP18.25■□□□□ 0.51
SPTBN1-203ENST00000389980 ABCC10Q5T3U5 1492 aa18.24■□□□□ 0.51
SPTBN1-203ENST00000389980 KCNH8Q96L42 1107 aa18.23■□□□□ 0.51
SPTBN1-203ENST00000389980 CDC42BPAQ5VT25 1732 aa18.22■□□□□ 0.51
SPTBN1-203ENST00000389980 CFDP1Q9UEE9 299 aaPredicted RBP18.22■□□□□ 0.51
SPTBN1-203ENST00000389980 ITSN2Q9NZM3 1697 aa18.21■□□□□ 0.51
SPTBN1-203ENST00000389980 ZNF777Q9ULD5 760 aaPredicted RBP18.21■□□□□ 0.51
SPTBN1-203ENST00000389980 RAB3GAP2Q9H2M9 1393 aa18.19■□□□□ 0.5
SPTBN1-203ENST00000389980 CHIC2Q9UKJ5 165 aa18.18■□□□□ 0.5
SPTBN1-203ENST00000389980 SETD5Q9C0A6 1442 aa18.18■□□□□ 0.5
SPTBN1-203ENST00000389980 TTC37Q6PGP7 1564 aa18.17■□□□□ 0.5
SPTBN1-203ENST00000389980 CAMSAP2Q08AD1 1489 aa18.16■□□□□ 0.5
SPTBN1-203ENST00000389980 ZEB1P37275 1124 aaPredicted RBP18.16■□□□□ 0.5
SPTBN1-203ENST00000389980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.16■□□□□ 0.5
SPTBN1-203ENST00000389980 CDC42BPBQ9Y5S2 1711 aa18.14■□□□□ 0.49
SPTBN1-203ENST00000389980 RRP7BPQ9NSQ0 103 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms