RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 GRIN2AQ12879 1464 aa17.53■□□□□ 0.4
VANGL1-203ENST00000369509 SYNJ2O15056 1496 aa17.52■□□□□ 0.4
VANGL1-203ENST00000369509 EFCAB5A4FU69 1503 aa17.51■□□□□ 0.39
VANGL1-203ENST00000369509 RANGAP1P46060 587 aaPredicted RBP17.5■□□□□ 0.39
VANGL1-203ENST00000369509 SAMD9Q5K651 1589 aa17.49■□□□□ 0.39
VANGL1-203ENST00000369509 IQGAP2Q13576 1575 aa17.48■□□□□ 0.39
VANGL1-203ENST00000369509 CEP170Q5SW79 1584 aa17.45■□□□□ 0.38
VANGL1-203ENST00000369509 CHD1O14646 1710 aa17.43■□□□□ 0.38
VANGL1-203ENST00000369509 KIAA0586Q9BVV6 1533 aa17.42■□□□□ 0.38
VANGL1-203ENST00000369509 NUP160Q12769 1436 aa17.41■□□□□ 0.38
VANGL1-203ENST00000369509 UGGT2Q9NYU1 1516 aa17.4■□□□□ 0.38
VANGL1-203ENST00000369509 FHOD3Q2V2M9 1422 aa17.38■□□□□ 0.37
VANGL1-203ENST00000369509 CHMP7Q8WUX9 453 aaPredicted RBP17.37■□□□□ 0.37
VANGL1-203ENST00000369509 PCF11O94913 1555 aaKnown RBP17.36■□□□□ 0.37
VANGL1-203ENST00000369509 KIAA0556O60303 1618 aa17.33■□□□□ 0.36
VANGL1-203ENST00000369509 DISP1Q96F81 1524 aa17.31■□□□□ 0.36
VANGL1-203ENST00000369509 FBLN2P98095 1184 aa17.3■□□□□ 0.36
VANGL1-203ENST00000369509 PPARGC1BQ86YN6 1023 aaKnown RBP17.3■□□□□ 0.36
VANGL1-203ENST00000369509 P3H3Q8IVL6 736 aa17.3■□□□□ 0.36
VANGL1-203ENST00000369509 CFAP43Q8NDM7 1665 aa17.3■□□□□ 0.36
VANGL1-203ENST00000369509 FYCO1Q9BQS8 1478 aa17.29■□□□□ 0.36
VANGL1-203ENST00000369509 TRIM26Q12899 539 aaPredicted RBP17.29■□□□□ 0.36
VANGL1-203ENST00000369509 FMN1Q68DA7 1419 aa17.29■□□□□ 0.36
VANGL1-203ENST00000369509 MAP3K1Q13233 1512 aa17.28■□□□□ 0.36
VANGL1-203ENST00000369509 LRRIQ1Q96JM4 1722 aa17.28■□□□□ 0.36
VANGL1-203ENST00000369509 CASKIN1Q8WXD9 1431 aa17.27■□□□□ 0.36
VANGL1-203ENST00000369509 TIAM1Q13009 1591 aa17.27■□□□□ 0.36
VANGL1-203ENST00000369509 PCGF6Q9BYE7 350 aa17.26■□□□□ 0.35
VANGL1-203ENST00000369509 HRCP23327 699 aa17.25■□□□□ 0.35
VANGL1-203ENST00000369509 SHROOM2Q13796 1616 aa17.24■□□□□ 0.35
VANGL1-203ENST00000369509 CLASP1Q7Z460 1538 aa17.21■□□□□ 0.35
VANGL1-203ENST00000369509 APLP2Q06481 763 aa17.2■□□□□ 0.34
VANGL1-203ENST00000369509 HECW1Q76N89 1606 aa17.18■□□□□ 0.34
VANGL1-203ENST00000369509 JPH4Q96JJ6 628 aa17.17■□□□□ 0.34
VANGL1-203ENST00000369509 TTBK1Q5TCY1 1321 aaPredicted RBP17.17■□□□□ 0.34
VANGL1-203ENST00000369509 KANK4Q5T7N3 995 aaPredicted RBP17.16■□□□□ 0.34
VANGL1-203ENST00000369509 CARMIL2Q6F5E8 1435 aa17.15■□□□□ 0.34
VANGL1-203ENST00000369509 LRRC9Q6ZRR7 1453 aa17.15■□□□□ 0.34
VANGL1-203ENST00000369509 RAPGEF6Q8TEU7 1601 aa17.14■□□□□ 0.33
VANGL1-203ENST00000369509 PRG4Q92954 1404 aaPredicted RBP17.11■□□□□ 0.33
VANGL1-203ENST00000369509 CCDC18Q5T9S5 1454 aa17.11■□□□□ 0.33
VANGL1-203ENST00000369509 EPRSP07814 1512 aaKnown RBP17.09■□□□□ 0.33
VANGL1-203ENST00000369509 ERCC6L2Q5T890 1561 aa17.08■□□□□ 0.32
VANGL1-203ENST00000369509 NUP153P49790 1475 aaKnown RBP17.08■□□□□ 0.32
VANGL1-203ENST00000369509 ABCA8O94911 1581 aa17.07■□□□□ 0.32
VANGL1-203ENST00000369509 ATP1B4Q9UN42 357 aaPredicted RBP17.06■□□□□ 0.32
VANGL1-203ENST00000369509 CDK13Q14004 1512 aaKnown RBP17.06■□□□□ 0.32
VANGL1-203ENST00000369509 MAGI3Q5TCQ9 1506 aa17.06■□□□□ 0.32
VANGL1-203ENST00000369509 PLB1Q6P1J6 1458 aa17.06■□□□□ 0.32
VANGL1-203ENST00000369509 EHBP1L1Q8N3D4 1523 aa17.05■□□□□ 0.32
VANGL1-203ENST00000369509 RRBP1Q9P2E9 1410 aaKnown RBP17.02■□□□□ 0.32
VANGL1-203ENST00000369509 SUPT6HQ7KZ85 1726 aaKnown RBP17.01■□□□□ 0.31
VANGL1-203ENST00000369509 ARHGEF11O15085 1522 aa16.98■□□□□ 0.31
VANGL1-203ENST00000369509 MTUS2Q5JR59 1369 aa16.98■□□□□ 0.31
VANGL1-203ENST00000369509 PHLDB1Q86UU1 1377 aa16.98■□□□□ 0.31
VANGL1-203ENST00000369509 PTPRGP23470 1445 aa16.98■□□□□ 0.31
VANGL1-203ENST00000369509 NCOA2Q15596 1464 aa16.94■□□□□ 0.3
VANGL1-203ENST00000369509 CCNB3Q8WWL7 1395 aa16.92■□□□□ 0.3
VANGL1-203ENST00000369509 ADCY10Q96PN6 1610 aa16.92■□□□□ 0.3
VANGL1-203ENST00000369509 ABCC2Q92887 1545 aa16.92■□□□□ 0.3
VANGL1-203ENST00000369509 UACAQ9BZF9 1416 aa16.91■□□□□ 0.3
VANGL1-203ENST00000369509 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
VANGL1-203ENST00000369509 ATP10BO94823 1461 aa16.91■□□□□ 0.3
VANGL1-203ENST00000369509 ARID3CA6NKF2 412 aa16.9■□□□□ 0.3
VANGL1-203ENST00000369509 TROQ12816 1431 aaPredicted RBP16.87■□□□□ 0.29
VANGL1-203ENST00000369509 UHRF1BP1LA0JNW5 1464 aa16.87■□□□□ 0.29
VANGL1-203ENST00000369509 MYOM3Q5VTT5 1437 aa16.87■□□□□ 0.29
VANGL1-203ENST00000369509 FGD6Q6ZV73 1430 aa16.87■□□□□ 0.29
VANGL1-203ENST00000369509 KIF14Q15058 1648 aa16.86■□□□□ 0.29
VANGL1-203ENST00000369509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.83■□□□□ 0.28
VANGL1-203ENST00000369509 ZCCHC11Q5TAX3 1644 aaKnown RBP16.83■□□□□ 0.28
VANGL1-203ENST00000369509 PTPN23Q9H3S7 1636 aa16.83■□□□□ 0.28
VANGL1-203ENST00000369509 CDK11AQ9UQ88 783 aaPredicted RBP16.82■□□□□ 0.28
VANGL1-203ENST00000369509 ITSN2Q9NZM3 1697 aa16.81■□□□□ 0.28
VANGL1-203ENST00000369509 KDM5BQ9UGL1 1544 aa16.8■□□□□ 0.28
VANGL1-203ENST00000369509 HNRNPUL2Q1KMD3 747 aaKnown RBP16.8■□□□□ 0.28
VANGL1-203ENST00000369509 TCOF1Q13428 1488 aaKnown RBP16.79■□□□□ 0.28
VANGL1-203ENST00000369509 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.79■□□□□ 0.28
VANGL1-203ENST00000369509 CDC42BPAQ5VT25 1732 aa16.78■□□□□ 0.28
VANGL1-203ENST00000369509 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.28
VANGL1-203ENST00000369509 MIA2Q96PC5 1412 aa16.77■□□□□ 0.28
VANGL1-203ENST00000369509 ABCC10Q5T3U5 1492 aa16.77■□□□□ 0.27
VANGL1-203ENST00000369509 GPATCH8Q9UKJ3 1502 aaKnown RBP16.73■□□□□ 0.27
VANGL1-203ENST00000369509 PLEKHD1A6NEE1 506 aa16.73■□□□□ 0.27
VANGL1-203ENST00000369509 FAM50AQ14320 339 aaKnown RBP16.73■□□□□ 0.27
VANGL1-203ENST00000369509 PREX2Q70Z35 1606 aa16.71■□□□□ 0.26
VANGL1-203ENST00000369509 TTC37Q6PGP7 1564 aa16.7■□□□□ 0.26
VANGL1-203ENST00000369509 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
VANGL1-203ENST00000369509 RIMBP3CA6NJZ7 1639 aa16.69■□□□□ 0.26
VANGL1-203ENST00000369509 RIMBP3BA6NNM3 1639 aa16.69■□□□□ 0.26
VANGL1-203ENST00000369509 RIMBP3Q9UFD9 1639 aa16.69■□□□□ 0.26
VANGL1-203ENST00000369509 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.69■□□□□ 0.26
VANGL1-203ENST00000369509 PTPRKQ15262 1439 aa16.68■□□□□ 0.26
VANGL1-203ENST00000369509 DNMT1P26358 1616 aaKnown RBP16.68■□□□□ 0.26
VANGL1-203ENST00000369509 ITGAEP38570 1179 aa16.67■□□□□ 0.26
VANGL1-203ENST00000369509 MYO5CQ9NQX4 1742 aa16.67■□□□□ 0.26
VANGL1-203ENST00000369509 CAMSAP2Q08AD1 1489 aa16.66■□□□□ 0.26
VANGL1-203ENST00000369509 CROCC2H7BZ55 1655 aa16.65■□□□□ 0.26
VANGL1-203ENST00000369509 WDR7Q9Y4E6 1490 aa16.63■□□□□ 0.25
VANGL1-203ENST00000369509 GCC2Q8IWJ2 1684 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms