RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 NISCHQ9Y2I1 1504 aa25.49■■□□□ 1.67
VANGL1-203ENST00000369509 CCDC180Q9P1Z9 1646 aa22.34■■□□□ 1.17
VANGL1-203ENST00000369509 ZCCHC6Q5VYS8 1495 aaKnown RBP21.43■■□□□ 1.02
VANGL1-203ENST00000369509 DCAF1Q9Y4B6 1507 aa21.11■□□□□ 0.97
VANGL1-203ENST00000369509 ABCC9O60706 1549 aa21.05■□□□□ 0.96
VANGL1-203ENST00000369509 MYO15BQ96JP2 1530 aa20.89■□□□□ 0.93
VANGL1-203ENST00000369509 DCAF8L2P0C7V8 631 aa20.85■□□□□ 0.93
VANGL1-203ENST00000369509 NACADO15069 1562 aa20.75■□□□□ 0.91
VANGL1-203ENST00000369509 SHROOM4Q9ULL8 1493 aa20.63■□□□□ 0.89
VANGL1-203ENST00000369509 RB1CC1Q8TDY2 1594 aa20.58■□□□□ 0.89
VANGL1-203ENST00000369509 SCRIBQ14160 1630 aa20.46■□□□□ 0.87
VANGL1-203ENST00000369509 UNC13AQ9UPW8 1703 aa20.29■□□□□ 0.84
VANGL1-203ENST00000369509 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.8
VANGL1-203ENST00000369509 CECR2Q9BXF3 1484 aa19.79■□□□□ 0.76
VANGL1-203ENST00000369509 SUPT5HO00267 1087 aaKnown RBP19.77■□□□□ 0.75
VANGL1-203ENST00000369509 PABPN1Q86U42 306 aaKnown RBP eCLIP19.77■□□□□ 0.75
VANGL1-203ENST00000369509 RSF1Q96T23 1441 aaPredicted RBP19.72■□□□□ 0.75
VANGL1-203ENST00000369509 MROH2BQ7Z745 1585 aa19.69■□□□□ 0.74
VANGL1-203ENST00000369509 BAZ1AQ9NRL2 1556 aaPredicted RBP19.68■□□□□ 0.74
VANGL1-203ENST00000369509 SMARCA4P51532 1647 aa19.64■□□□□ 0.73
VANGL1-203ENST00000369509 WIZO95785 1651 aa19.55■□□□□ 0.72
VANGL1-203ENST00000369509 PEG3Q9GZU2 1588 aa19.43■□□□□ 0.7
VANGL1-203ENST00000369509 EIF4G1Q04637 1599 aaKnown RBP19.38■□□□□ 0.69
VANGL1-203ENST00000369509 TOP2AP11388 1531 aaKnown RBP19.34■□□□□ 0.69
VANGL1-203ENST00000369509 SMARCA2P51531 1590 aa19.28■□□□□ 0.68
VANGL1-203ENST00000369509 ATAD2BQ9ULI0 1458 aa19.28■□□□□ 0.68
VANGL1-203ENST00000369509 BAZ1BQ9UIG0 1483 aaKnown RBP19.15■□□□□ 0.66
VANGL1-203ENST00000369509 HMGXB3Q12766 1538 aa19.15■□□□□ 0.66
VANGL1-203ENST00000369509 NCAPD3P42695 1498 aa19.13■□□□□ 0.65
VANGL1-203ENST00000369509 CC2D2AQ9P2K1 1620 aa19.11■□□□□ 0.65
VANGL1-203ENST00000369509 CCDC88BA6NC98 1476 aa19.09■□□□□ 0.65
VANGL1-203ENST00000369509 CHIC1Q5VXU3 224 aa18.94■□□□□ 0.62
VANGL1-203ENST00000369509 PRDM2Q13029 1718 aa18.73■□□□□ 0.59
VANGL1-203ENST00000369509 ABCC8Q09428 1581 aa18.7■□□□□ 0.58
VANGL1-203ENST00000369509 CFTRP13569 1480 aa18.69■□□□□ 0.58
VANGL1-203ENST00000369509 TRIM41Q8WV44 630 aa18.6■□□□□ 0.57
VANGL1-203ENST00000369509 CADPSQ9ULU8 1353 aa18.6■□□□□ 0.57
VANGL1-203ENST00000369509 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
VANGL1-203ENST00000369509 WRNQ14191 1432 aaPredicted RBP eCLIP18.54■□□□□ 0.56
VANGL1-203ENST00000369509 SYNJ1O43426 1573 aa18.54■□□□□ 0.56
VANGL1-203ENST00000369509 LAMC3Q9Y6N6 1575 aa18.52■□□□□ 0.56
VANGL1-203ENST00000369509 NESP48681 1621 aa18.49■□□□□ 0.55
VANGL1-203ENST00000369509 BIVM-ERCC5R4GMW8 1640 aa18.49■□□□□ 0.55
VANGL1-203ENST00000369509 TOP2BQ02880 1626 aa18.47■□□□□ 0.55
VANGL1-203ENST00000369509 CUX1P39880 1505 aa18.42■□□□□ 0.54
VANGL1-203ENST00000369509 FANCD2Q9BXW9 1451 aa18.41■□□□□ 0.54
VANGL1-203ENST00000369509 KIF21AQ7Z4S6 1674 aa18.35■□□□□ 0.53
VANGL1-203ENST00000369509 CEP164Q9UPV0 1460 aa18.31■□□□□ 0.52
VANGL1-203ENST00000369509 PDS5BQ9NTI5 1447 aa18.3■□□□□ 0.52
VANGL1-203ENST00000369509 SOGA1O94964 1423 aa18.29■□□□□ 0.52
VANGL1-203ENST00000369509 DNMBPQ6XZF7 1577 aa18.29■□□□□ 0.52
VANGL1-203ENST00000369509 RUSC2Q8N2Y8 1516 aa18.25■□□□□ 0.51
VANGL1-203ENST00000369509 EEA1Q15075 1411 aa18.24■□□□□ 0.51
VANGL1-203ENST00000369509 TOPBP1Q92547 1522 aa18.23■□□□□ 0.51
VANGL1-203ENST00000369509 FAM9AQ8IZU1 332 aaPredicted RBP18.23■□□□□ 0.51
VANGL1-203ENST00000369509 URB2Q14146 1524 aaKnown RBP18.22■□□□□ 0.51
VANGL1-203ENST00000369509 FGD5Q6ZNL6 1462 aa18.21■□□□□ 0.51
VANGL1-203ENST00000369509 LOC105371045A0A1W2PR82 267 aa18.18■□□□□ 0.5
VANGL1-203ENST00000369509 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.49
VANGL1-203ENST00000369509 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
VANGL1-203ENST00000369509 WDR97A6NE52 1622 aa18.11■□□□□ 0.49
VANGL1-203ENST00000369509 KIF21BO75037 1637 aa18.08■□□□□ 0.49
VANGL1-203ENST00000369509 CSRNP3Q8WYN3 585 aa18.08■□□□□ 0.49
VANGL1-203ENST00000369509 WDR62O43379 1518 aa18.07■□□□□ 0.48
VANGL1-203ENST00000369509 THOC2Q8NI27 1593 aaKnown RBP18.06■□□□□ 0.48
VANGL1-203ENST00000369509 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
VANGL1-203ENST00000369509 ABCA10Q8WWZ4 1543 aa18.06■□□□□ 0.48
VANGL1-203ENST00000369509 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
VANGL1-203ENST00000369509 CUX2O14529 1486 aa18.04■□□□□ 0.48
VANGL1-203ENST00000369509 ERCC6Q03468 1493 aa18.02■□□□□ 0.48
VANGL1-203ENST00000369509 TARBP1Q13395 1621 aaKnown RBP18.02■□□□□ 0.47
VANGL1-203ENST00000369509 GOLGA3Q08378 1498 aa18■□□□□ 0.47
VANGL1-203ENST00000369509 PRXQ9BXM0 1461 aa17.98■□□□□ 0.47
VANGL1-203ENST00000369509 ABCA5Q8WWZ7 1642 aa17.97■□□□□ 0.47
VANGL1-203ENST00000369509 ERICH3Q5RHP9 1530 aa17.96■□□□□ 0.47
VANGL1-203ENST00000369509 EHMT2Q96KQ7 1210 aa17.95■□□□□ 0.46
VANGL1-203ENST00000369509 RAPGEF2Q9Y4G8 1499 aa17.94■□□□□ 0.46
VANGL1-203ENST00000369509 IGF1RP08069 1367 aa17.91■□□□□ 0.46
VANGL1-203ENST00000369509 TNIKQ9UKE5 1360 aa17.9■□□□□ 0.46
VANGL1-203ENST00000369509 CUL7Q14999 1698 aa17.87■□□□□ 0.45
VANGL1-203ENST00000369509 IFT140Q96RY7 1462 aa17.87■□□□□ 0.45
VANGL1-203ENST00000369509 PBRM1Q86U86 1689 aa17.86■□□□□ 0.45
VANGL1-203ENST00000369509 GAPVD1Q14C86 1478 aa17.85■□□□□ 0.45
VANGL1-203ENST00000369509 TDRD9Q8NDG6 1382 aaKnown RBP17.83■□□□□ 0.45
VANGL1-203ENST00000369509 CEP162Q5TB80 1403 aa17.82■□□□□ 0.44
VANGL1-203ENST00000369509 UBTFP17480 764 aaKnown RBP17.8■□□□□ 0.44
VANGL1-203ENST00000369509 CARMIL1Q5VZK9 1371 aa17.8■□□□□ 0.44
VANGL1-203ENST00000369509 ZNF608Q9ULD9 1512 aaPredicted RBP17.79■□□□□ 0.44
VANGL1-203ENST00000369509 EIF4G3O43432 1585 aaKnown RBP17.78■□□□□ 0.44
VANGL1-203ENST00000369509 AQRO60306 1485 aaKnown RBP eCLIP17.76■□□□□ 0.436e-6■■■■□ 25.1
VANGL1-203ENST00000369509 ADAMTS12P58397 1594 aa17.73■□□□□ 0.43
VANGL1-203ENST00000369509 GRIN2BQ13224 1484 aa17.72■□□□□ 0.43
VANGL1-203ENST00000369509 CTTNBP2Q8WZ74 1663 aa17.7■□□□□ 0.42
VANGL1-203ENST00000369509 CLIP1P30622 1438 aa17.68■□□□□ 0.42
VANGL1-203ENST00000369509 FHAD1B1AJZ9 1412 aa17.65■□□□□ 0.42
VANGL1-203ENST00000369509 SNAPC4Q5SXM2 1469 aa17.62■□□□□ 0.41
VANGL1-203ENST00000369509 MAGI1Q96QZ7 1491 aaPredicted RBP17.6■□□□□ 0.41
VANGL1-203ENST00000369509 ARAP1Q96P48 1450 aa17.58■□□□□ 0.4
VANGL1-203ENST00000369509 ARHGAP35Q9NRY4 1499 aa17.57■□□□□ 0.4
VANGL1-203ENST00000369509 VPS8Q8N3P4 1428 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms