RNA–Protein interactions for RNA: ENST00000368396.8

MUC1-209, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-209ENST00000368396 PBRM1Q86U86 1689 aa12.22□□□□□ -0.45
MUC1-209ENST00000368396 CTTNBP2Q8WZ74 1663 aa12.22□□□□□ -0.45
MUC1-209ENST00000368396 APLP2Q06481 763 aa12.21□□□□□ -0.45
MUC1-209ENST00000368396 EFCAB5A4FU69 1503 aa12.21□□□□□ -0.46
MUC1-209ENST00000368396 GRIN2BQ13224 1484 aa12.21□□□□□ -0.46
MUC1-209ENST00000368396 AQRO60306 1485 aaKnown RBP eCLIP12.2□□□□□ -0.46
MUC1-209ENST00000368396 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
MUC1-209ENST00000368396 ADAMTS12P58397 1594 aa12.19□□□□□ -0.46
MUC1-209ENST00000368396 ZNF608Q9ULD9 1512 aaPredicted RBP12.17□□□□□ -0.46
MUC1-209ENST00000368396 TTBK1Q5TCY1 1321 aaPredicted RBP12.16□□□□□ -0.46
MUC1-209ENST00000368396 MAP3K1Q13233 1512 aa12.16□□□□□ -0.46
MUC1-209ENST00000368396 EIF4G3O43432 1585 aaKnown RBP12.13□□□□□ -0.47
MUC1-209ENST00000368396 SAMD9Q5K651 1589 aa12.13□□□□□ -0.47
MUC1-209ENST00000368396 FHOD3Q2V2M9 1422 aa12.11□□□□□ -0.47
MUC1-209ENST00000368396 ZEB1P37275 1124 aaPredicted RBP12.11□□□□□ -0.47
MUC1-209ENST00000368396 TIAM1Q13009 1591 aa12.1□□□□□ -0.47
MUC1-209ENST00000368396 SNAPC4Q5SXM2 1469 aa12.1□□□□□ -0.47
MUC1-209ENST00000368396 KANK4Q5T7N3 995 aaPredicted RBP12.1□□□□□ -0.47
MUC1-209ENST00000368396 PCF11O94913 1555 aaKnown RBP12.09□□□□□ -0.47
MUC1-209ENST00000368396 FYCO1Q9BQS8 1478 aa12.09□□□□□ -0.47
MUC1-209ENST00000368396 ADRA2BP18089 450 aa12.09□□□□□ -0.47
MUC1-209ENST00000368396 PPP6R1Q9UPN7 881 aa12.09□□□□□ -0.47
MUC1-209ENST00000368396 CASKIN1Q8WXD9 1431 aa12.09□□□□□ -0.47
MUC1-209ENST00000368396 MAGI1Q96QZ7 1491 aaPredicted RBP12.08□□□□□ -0.47
MUC1-209ENST00000368396 FMN1Q68DA7 1419 aa12.08□□□□□ -0.48
MUC1-209ENST00000368396 CFAP43Q8NDM7 1665 aa12.07□□□□□ -0.48
MUC1-209ENST00000368396 IQGAP2Q13576 1575 aa12.07□□□□□ -0.48
MUC1-209ENST00000368396 P3H3Q8IVL6 736 aa12.07□□□□□ -0.48
MUC1-209ENST00000368396 GRIN2AQ12879 1464 aa12.05□□□□□ -0.48
MUC1-209ENST00000368396 RRBP1Q9P2E9 1410 aaKnown RBP12.04□□□□□ -0.48
MUC1-209ENST00000368396 LRRC9Q6ZRR7 1453 aa12.04□□□□□ -0.48
MUC1-209ENST00000368396 KIAA0586Q9BVV6 1533 aa12.04□□□□□ -0.48
MUC1-209ENST00000368396 UGGT2Q9NYU1 1516 aa12.04□□□□□ -0.48
MUC1-209ENST00000368396 SYNJ2O15056 1496 aa12.03□□□□□ -0.48
MUC1-209ENST00000368396 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.99□□□□□ -0.49
MUC1-209ENST00000368396 NUP160Q12769 1436 aa11.97□□□□□ -0.49
MUC1-209ENST00000368396 CCNB3Q8WWL7 1395 aa11.97□□□□□ -0.49
MUC1-209ENST00000368396 HNRNPUL2Q1KMD3 747 aaKnown RBP11.97□□□□□ -0.49
MUC1-209ENST00000368396 CCER1Q8TC90 406 aaPredicted RBP11.97□□□□□ -0.49
MUC1-209ENST00000368396 CHMP7Q8WUX9 453 aaPredicted RBP11.97□□□□□ -0.49
MUC1-209ENST00000368396 CEP170Q5SW79 1584 aa11.96□□□□□ -0.49
MUC1-209ENST00000368396 DISP1Q96F81 1524 aa11.96□□□□□ -0.5
MUC1-209ENST00000368396 LRRIQ1Q96JM4 1722 aa11.95□□□□□ -0.5
MUC1-209ENST00000368396 ATP1B4Q9UN42 357 aaPredicted RBP11.95□□□□□ -0.5
MUC1-209ENST00000368396 KIAA0556O60303 1618 aa11.95□□□□□ -0.5
MUC1-209ENST00000368396 CCDC18Q5T9S5 1454 aa11.94□□□□□ -0.5
MUC1-209ENST00000368396 HECW1Q76N89 1606 aa11.93□□□□□ -0.5
MUC1-209ENST00000368396 PHLDB1Q86UU1 1377 aa11.93□□□□□ -0.5
MUC1-209ENST00000368396 EHBP1L1Q8N3D4 1523 aa11.91□□□□□ -0.5
MUC1-209ENST00000368396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.9□□□□□ -0.5
MUC1-209ENST00000368396 FBLN2P98095 1184 aa11.89□□□□□ -0.51
MUC1-209ENST00000368396 MTUS2Q5JR59 1369 aa11.89□□□□□ -0.51
MUC1-209ENST00000368396 EPRSP07814 1512 aaKnown RBP11.88□□□□□ -0.51
MUC1-209ENST00000368396 ARHGEF11O15085 1522 aa11.87□□□□□ -0.51
MUC1-209ENST00000368396 JPH4Q96JJ6 628 aa11.87□□□□□ -0.51
MUC1-209ENST00000368396 CARMIL2Q6F5E8 1435 aa11.86□□□□□ -0.51
MUC1-209ENST00000368396 MAGI3Q5TCQ9 1506 aa11.86□□□□□ -0.51
MUC1-209ENST00000368396 SUPT6HQ7KZ85 1726 aaKnown RBP11.86□□□□□ -0.51
MUC1-209ENST00000368396 NCOA2Q15596 1464 aa11.86□□□□□ -0.51
MUC1-209ENST00000368396 RAPGEF6Q8TEU7 1601 aa11.86□□□□□ -0.51
MUC1-209ENST00000368396 FGD6Q6ZV73 1430 aa11.85□□□□□ -0.51
MUC1-209ENST00000368396 NUP153P49790 1475 aaKnown RBP11.83□□□□□ -0.52
MUC1-209ENST00000368396 CHD1O14646 1710 aa11.83□□□□□ -0.52
MUC1-209ENST00000368396 CDK13Q14004 1512 aaKnown RBP11.83□□□□□ -0.52
MUC1-209ENST00000368396 MYOM3Q5VTT5 1437 aa11.83□□□□□ -0.52
MUC1-209ENST00000368396 CLSPNQ9HAW4 1339 aa11.81□□□□□ -0.52
MUC1-209ENST00000368396 FAM50AQ14320 339 aaKnown RBP11.8□□□□□ -0.52
MUC1-209ENST00000368396 DHX57Q6P158 1386 aaKnown RBP11.79□□□□□ -0.52
MUC1-209ENST00000368396 ABCA8O94911 1581 aa11.79□□□□□ -0.52
MUC1-209ENST00000368396 SHROOM2Q13796 1616 aa11.78□□□□□ -0.52
MUC1-209ENST00000368396 SETD5Q9C0A6 1442 aa11.78□□□□□ -0.52
MUC1-209ENST00000368396 TCOF1Q13428 1488 aaKnown RBP11.78□□□□□ -0.52
MUC1-209ENST00000368396 PLB1Q6P1J6 1458 aa11.78□□□□□ -0.52
MUC1-209ENST00000368396 ITGAEP38570 1179 aa11.78□□□□□ -0.52
MUC1-209ENST00000368396 PTPN23Q9H3S7 1636 aa11.77□□□□□ -0.53
MUC1-209ENST00000368396 RAB3GAP2Q9H2M9 1393 aa11.77□□□□□ -0.53
MUC1-209ENST00000368396 PRG4Q92954 1404 aaPredicted RBP11.77□□□□□ -0.53
MUC1-209ENST00000368396 MIA2Q96PC5 1412 aa11.77□□□□□ -0.53
MUC1-209ENST00000368396 CDK11AQ9UQ88 783 aaPredicted RBP11.76□□□□□ -0.53
MUC1-209ENST00000368396 PIAS4Q8N2W9 510 aaPredicted RBP11.75□□□□□ -0.53
MUC1-209ENST00000368396 TROQ12816 1431 aaPredicted RBP11.75□□□□□ -0.53
MUC1-209ENST00000368396 ARID3CA6NKF2 412 aa11.73□□□□□ -0.53
MUC1-209ENST00000368396 CLASP1Q7Z460 1538 aa11.73□□□□□ -0.53
MUC1-209ENST00000368396 ADCY10Q96PN6 1610 aa11.73□□□□□ -0.53
MUC1-209ENST00000368396 PTPRGP23470 1445 aa11.72□□□□□ -0.53
MUC1-209ENST00000368396 PTPRKQ15262 1439 aa11.72□□□□□ -0.53
MUC1-209ENST00000368396 ATP10BO94823 1461 aa11.7□□□□□ -0.54
MUC1-209ENST00000368396 HFM1A2PYH4 1435 aa11.69□□□□□ -0.54
MUC1-209ENST00000368396 AKNAQ7Z591 1439 aa11.68□□□□□ -0.54
MUC1-209ENST00000368396 UACAQ9BZF9 1416 aa11.67□□□□□ -0.54
MUC1-209ENST00000368396 ERCC6L2Q5T890 1561 aa11.67□□□□□ -0.54
MUC1-209ENST00000368396 MAPKBP1O60336 1514 aa11.66□□□□□ -0.54
MUC1-209ENST00000368396 ITSN2Q9NZM3 1697 aa11.66□□□□□ -0.54
MUC1-209ENST00000368396 KIF14Q15058 1648 aa11.66□□□□□ -0.54
MUC1-209ENST00000368396 NAIPQ13075 1403 aa11.66□□□□□ -0.54
MUC1-209ENST00000368396 PLEKHD1A6NEE1 506 aa11.65□□□□□ -0.54
MUC1-209ENST00000368396 GPATCH8Q9UKJ3 1502 aaKnown RBP11.65□□□□□ -0.55
MUC1-209ENST00000368396 ABCC10Q5T3U5 1492 aa11.64□□□□□ -0.55
MUC1-209ENST00000368396 DNMT1P26358 1616 aaKnown RBP11.64□□□□□ -0.55
MUC1-209ENST00000368396 GCC2Q8IWJ2 1684 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms