RNA–Protein interactions for RNA: ENST00000368396.8

MUC1-209, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-209ENST00000368396 NISCHQ9Y2I1 1504 aa17.66■□□□□ 0.42
MUC1-209ENST00000368396 AEBP2Q6ZN18 517 aaPredicted RBP15.87■□□□□ 0.13
MUC1-209ENST00000368396 CHIC1Q5VXU3 224 aa15.49■□□□□ 0.07
MUC1-209ENST00000368396 CCDC180Q9P1Z9 1646 aa15.32■□□□□ 0.04
MUC1-209ENST00000368396 ZCCHC6Q5VYS8 1495 aaKnown RBP14.87□□□□□ -0.03
MUC1-209ENST00000368396 DCAF1Q9Y4B6 1507 aa14.62□□□□□ -0.07
MUC1-209ENST00000368396 SHROOM4Q9ULL8 1493 aa14.45□□□□□ -0.1
MUC1-209ENST00000368396 DCAF8L2P0C7V8 631 aa14.44□□□□□ -0.1
MUC1-209ENST00000368396 MYO15BQ96JP2 1530 aa14.4□□□□□ -0.1
MUC1-209ENST00000368396 ABCC9O60706 1549 aa14.31□□□□□ -0.12
MUC1-209ENST00000368396 NACADO15069 1562 aa14.24□□□□□ -0.13
MUC1-209ENST00000368396 SCRIBQ14160 1630 aa14.08□□□□□ -0.15
MUC1-209ENST00000368396 RB1CC1Q8TDY2 1594 aa14.06□□□□□ -0.16
MUC1-209ENST00000368396 SUPT5HO00267 1087 aaKnown RBP13.98□□□□□ -0.17
MUC1-209ENST00000368396 UNC13AQ9UPW8 1703 aa13.77□□□□□ -0.21
MUC1-209ENST00000368396 RSF1Q96T23 1441 aaPredicted RBP13.75□□□□□ -0.21
MUC1-209ENST00000368396 CECR2Q9BXF3 1484 aa13.69□□□□□ -0.22
MUC1-209ENST00000368396 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
MUC1-209ENST00000368396 BICRAQ9NZM4 1560 aa13.66□□□□□ -0.22
MUC1-209ENST00000368396 MROH2BQ7Z745 1585 aa13.63□□□□□ -0.23
MUC1-209ENST00000368396 BAZ1AQ9NRL2 1556 aaPredicted RBP13.61□□□□□ -0.23
MUC1-209ENST00000368396 SMARCA4P51532 1647 aa13.53□□□□□ -0.24
MUC1-209ENST00000368396 PABPN1Q86U42 306 aaKnown RBP eCLIP13.52□□□□□ -0.25
MUC1-209ENST00000368396 WIZO95785 1651 aa13.52□□□□□ -0.25
MUC1-209ENST00000368396 TOP2AP11388 1531 aaKnown RBP13.41□□□□□ -0.26
MUC1-209ENST00000368396 PEG3Q9GZU2 1588 aa13.37□□□□□ -0.27
MUC1-209ENST00000368396 SENP3Q9H4L4 574 aaPredicted RBP13.35□□□□□ -0.27
MUC1-209ENST00000368396 SMARCA2P51531 1590 aa13.28□□□□□ -0.28
MUC1-209ENST00000368396 ATAD2BQ9ULI0 1458 aa13.28□□□□□ -0.28
MUC1-209ENST00000368396 CCDC88BA6NC98 1476 aa13.27□□□□□ -0.29
MUC1-209ENST00000368396 EIF4G1Q04637 1599 aaKnown RBP13.25□□□□□ -0.29
MUC1-209ENST00000368396 BAZ1BQ9UIG0 1483 aaKnown RBP13.19□□□□□ -0.3
MUC1-209ENST00000368396 TRIM41Q8WV44 630 aa13.15□□□□□ -0.3
MUC1-209ENST00000368396 NCAPD3P42695 1498 aa13.15□□□□□ -0.3
MUC1-209ENST00000368396 HMGXB3Q12766 1538 aa13.13□□□□□ -0.31
MUC1-209ENST00000368396 ABCC8Q09428 1581 aa13.01□□□□□ -0.33
MUC1-209ENST00000368396 CC2D2AQ9P2K1 1620 aa12.98□□□□□ -0.33
MUC1-209ENST00000368396 LOC105371045A0A1W2PR82 267 aa12.97□□□□□ -0.33
MUC1-209ENST00000368396 WRNQ14191 1432 aaPredicted RBP eCLIP12.92□□□□□ -0.34
MUC1-209ENST00000368396 CFTRP13569 1480 aa12.89□□□□□ -0.35
MUC1-209ENST00000368396 FAM9AQ8IZU1 332 aaPredicted RBP12.88□□□□□ -0.35
MUC1-209ENST00000368396 SYNJ1O43426 1573 aa12.87□□□□□ -0.35
MUC1-209ENST00000368396 EEA1Q15075 1411 aa12.85□□□□□ -0.35
MUC1-209ENST00000368396 PRDM2Q13029 1718 aa12.82□□□□□ -0.36
MUC1-209ENST00000368396 TOP2BQ02880 1626 aa12.81□□□□□ -0.36
MUC1-209ENST00000368396 CADPSQ9ULU8 1353 aa12.81□□□□□ -0.36
MUC1-209ENST00000368396 BIVM-ERCC5R4GMW8 1640 aa12.8□□□□□ -0.36
MUC1-209ENST00000368396 SOGA1O94964 1423 aa12.8□□□□□ -0.36
MUC1-209ENST00000368396 RUSC2Q8N2Y8 1516 aa12.76□□□□□ -0.37
MUC1-209ENST00000368396 CUX1P39880 1505 aa12.75□□□□□ -0.37
MUC1-209ENST00000368396 CSRNP3Q8WYN3 585 aa12.74□□□□□ -0.37
MUC1-209ENST00000368396 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
MUC1-209ENST00000368396 KIF21BO75037 1637 aa12.66□□□□□ -0.38
MUC1-209ENST00000368396 GOLGA3Q08378 1498 aa12.66□□□□□ -0.38
MUC1-209ENST00000368396 EHMT2Q96KQ7 1210 aa12.66□□□□□ -0.38
MUC1-209ENST00000368396 FANCD2Q9BXW9 1451 aa12.65□□□□□ -0.38
MUC1-209ENST00000368396 LAMC3Q9Y6N6 1575 aa12.65□□□□□ -0.38
MUC1-209ENST00000368396 CEP164Q9UPV0 1460 aa12.65□□□□□ -0.38
MUC1-209ENST00000368396 NESP48681 1621 aa12.62□□□□□ -0.39
MUC1-209ENST00000368396 DNAJC5BQ9UF47 199 aa12.59□□□□□ -0.39
MUC1-209ENST00000368396 CEP162Q5TB80 1403 aa12.59□□□□□ -0.39
MUC1-209ENST00000368396 KIF27Q86VH2 1401 aa12.59□□□□□ -0.39
MUC1-209ENST00000368396 DNMBPQ6XZF7 1577 aa12.58□□□□□ -0.4
MUC1-209ENST00000368396 PLPPR3Q6T4P5 718 aa12.57□□□□□ -0.4
MUC1-209ENST00000368396 FGD5Q6ZNL6 1462 aa12.57□□□□□ -0.4
MUC1-209ENST00000368396 PRXQ9BXM0 1461 aa12.56□□□□□ -0.4
MUC1-209ENST00000368396 ERICH3Q5RHP9 1530 aa12.56□□□□□ -0.4
MUC1-209ENST00000368396 PDS5BQ9NTI5 1447 aa12.55□□□□□ -0.4
MUC1-209ENST00000368396 UBTFP17480 764 aaKnown RBP12.55□□□□□ -0.4
MUC1-209ENST00000368396 TOPBP1Q92547 1522 aa12.55□□□□□ -0.4
MUC1-209ENST00000368396 RAPGEF2Q9Y4G8 1499 aa12.54□□□□□ -0.4
MUC1-209ENST00000368396 TRIM26Q12899 539 aaPredicted RBP12.52□□□□□ -0.41
MUC1-209ENST00000368396 PCGF6Q9BYE7 350 aa12.52□□□□□ -0.41
MUC1-209ENST00000368396 CUX2O14529 1486 aa12.52□□□□□ -0.41
MUC1-209ENST00000368396 URB2Q14146 1524 aaKnown RBP12.5□□□□□ -0.41
MUC1-209ENST00000368396 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
MUC1-209ENST00000368396 ABCA10Q8WWZ4 1543 aa12.48□□□□□ -0.41
MUC1-209ENST00000368396 IGF1RP08069 1367 aa12.47□□□□□ -0.41
MUC1-209ENST00000368396 FOXD1Q16676 465 aa12.47□□□□□ -0.41
MUC1-209ENST00000368396 KIF21AQ7Z4S6 1674 aa12.46□□□□□ -0.41
MUC1-209ENST00000368396 RAD54L2Q9Y4B4 1467 aa12.45□□□□□ -0.42
MUC1-209ENST00000368396 CLIP1P30622 1438 aa12.45□□□□□ -0.42
MUC1-209ENST00000368396 WDR97A6NE52 1622 aa12.42□□□□□ -0.42
MUC1-209ENST00000368396 CARMIL1Q5VZK9 1371 aa12.4□□□□□ -0.42
MUC1-209ENST00000368396 MRC2Q9UBG0 1479 aa12.39□□□□□ -0.43
MUC1-209ENST00000368396 VPS8Q8N3P4 1428 aa12.37□□□□□ -0.43
MUC1-209ENST00000368396 ABCA5Q8WWZ7 1642 aa12.37□□□□□ -0.43
MUC1-209ENST00000368396 CUL7Q14999 1698 aa12.35□□□□□ -0.43
MUC1-209ENST00000368396 TARBP1Q13395 1621 aaKnown RBP12.35□□□□□ -0.43
MUC1-209ENST00000368396 HRCP23327 699 aa12.33□□□□□ -0.44
MUC1-209ENST00000368396 ARAP1Q96P48 1450 aa12.33□□□□□ -0.44
MUC1-209ENST00000368396 WDR62O43379 1518 aa12.32□□□□□ -0.44
MUC1-209ENST00000368396 GAPVD1Q14C86 1478 aa12.32□□□□□ -0.44
MUC1-209ENST00000368396 PPARGC1BQ86YN6 1023 aaKnown RBP12.31□□□□□ -0.44
MUC1-209ENST00000368396 TDRD9Q8NDG6 1382 aaKnown RBP12.3□□□□□ -0.44
MUC1-209ENST00000368396 ARHGAP35Q9NRY4 1499 aa12.29□□□□□ -0.44
MUC1-209ENST00000368396 IFT140Q96RY7 1462 aa12.27□□□□□ -0.45
MUC1-209ENST00000368396 RANGAP1P46060 587 aaPredicted RBP12.26□□□□□ -0.45
MUC1-209ENST00000368396 ERCC6Q03468 1493 aa12.25□□□□□ -0.45
MUC1-209ENST00000368396 THOC2Q8NI27 1593 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms