RNA–Protein interactions for RNA: ENST00000344135.5

TRIO-201, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-201ENST00000344135 ATP1B4Q9UN42 357 aaPredicted RBP13.25□□□□□ -0.29
TRIO-201ENST00000344135 KANK4Q5T7N3 995 aaPredicted RBP13.25□□□□□ -0.29
TRIO-201ENST00000344135 EIF4G3O43432 1585 aaKnown RBP13.24□□□□□ -0.29
TRIO-201ENST00000344135 GRIN2BQ13224 1484 aa13.24□□□□□ -0.29
TRIO-201ENST00000344135 FHOD3Q2V2M9 1422 aa13.24□□□□□ -0.29
TRIO-201ENST00000344135 APLP2Q06481 763 aa13.24□□□□□ -0.29
TRIO-201ENST00000344135 SNAPC4Q5SXM2 1469 aa13.23□□□□□ -0.29
TRIO-201ENST00000344135 FHAD1B1AJZ9 1412 aa13.21□□□□□ -0.29
TRIO-201ENST00000344135 ADAMTS12P58397 1594 aa13.19□□□□□ -0.3
TRIO-201ENST00000344135 CHMP7Q8WUX9 453 aaPredicted RBP13.18□□□□□ -0.3
TRIO-201ENST00000344135 CTTNBP2Q8WZ74 1663 aa13.17□□□□□ -0.3
TRIO-201ENST00000344135 ARID3CA6NKF2 412 aa13.14□□□□□ -0.31
TRIO-201ENST00000344135 HRCP23327 699 aa13.13□□□□□ -0.31
TRIO-201ENST00000344135 HNRNPUL2Q1KMD3 747 aaKnown RBP13.12□□□□□ -0.31
TRIO-201ENST00000344135 GRIN2AQ12879 1464 aa13.12□□□□□ -0.31
TRIO-201ENST00000344135 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
TRIO-201ENST00000344135 PCF11O94913 1555 aaKnown RBP13.1□□□□□ -0.31
TRIO-201ENST00000344135 IQGAP2Q13576 1575 aa13.08□□□□□ -0.32
TRIO-201ENST00000344135 SYNJ2O15056 1496 aa13.08□□□□□ -0.32
TRIO-201ENST00000344135 MAGI1Q96QZ7 1491 aaPredicted RBP13.08□□□□□ -0.32
TRIO-201ENST00000344135 EFCAB5A4FU69 1503 aa13.06□□□□□ -0.32
TRIO-201ENST00000344135 CEP170Q5SW79 1584 aa13.06□□□□□ -0.32
TRIO-201ENST00000344135 SAMD9Q5K651 1589 aa13.05□□□□□ -0.32
TRIO-201ENST00000344135 KIAA0586Q9BVV6 1533 aa13.04□□□□□ -0.32
TRIO-201ENST00000344135 ITGAEP38570 1179 aa13.03□□□□□ -0.32
TRIO-201ENST00000344135 JPH4Q96JJ6 628 aa13.02□□□□□ -0.32
TRIO-201ENST00000344135 TIAM1Q13009 1591 aa13.02□□□□□ -0.32
TRIO-201ENST00000344135 FMN1Q68DA7 1419 aa13.02□□□□□ -0.33
TRIO-201ENST00000344135 CASKIN1Q8WXD9 1431 aa13.01□□□□□ -0.33
TRIO-201ENST00000344135 DISP1Q96F81 1524 aa13.01□□□□□ -0.33
TRIO-201ENST00000344135 LRRC9Q6ZRR7 1453 aa13□□□□□ -0.33
TRIO-201ENST00000344135 FYCO1Q9BQS8 1478 aa12.99□□□□□ -0.33
TRIO-201ENST00000344135 PHLDB1Q86UU1 1377 aa12.98□□□□□ -0.33
TRIO-201ENST00000344135 NUP160Q12769 1436 aa12.98□□□□□ -0.33
TRIO-201ENST00000344135 LRRIQ1Q96JM4 1722 aa12.98□□□□□ -0.33
TRIO-201ENST00000344135 UGGT2Q9NYU1 1516 aa12.97□□□□□ -0.33
TRIO-201ENST00000344135 CCER1Q8TC90 406 aaPredicted RBP12.97□□□□□ -0.33
TRIO-201ENST00000344135 CHD1O14646 1710 aa12.95□□□□□ -0.34
TRIO-201ENST00000344135 KIAA0556O60303 1618 aa12.95□□□□□ -0.34
TRIO-201ENST00000344135 CDK13Q14004 1512 aaKnown RBP12.94□□□□□ -0.34
TRIO-201ENST00000344135 MTUS2Q5JR59 1369 aa12.94□□□□□ -0.34
TRIO-201ENST00000344135 FAM50AQ14320 339 aaKnown RBP12.94□□□□□ -0.34
TRIO-201ENST00000344135 PLB1Q6P1J6 1458 aa12.93□□□□□ -0.34
TRIO-201ENST00000344135 CCNB3Q8WWL7 1395 aa12.92□□□□□ -0.34
TRIO-201ENST00000344135 CFAP43Q8NDM7 1665 aa12.92□□□□□ -0.34
TRIO-201ENST00000344135 MAGI3Q5TCQ9 1506 aa12.91□□□□□ -0.34
TRIO-201ENST00000344135 MAP3K1Q13233 1512 aa12.91□□□□□ -0.34
TRIO-201ENST00000344135 PRG4Q92954 1404 aaPredicted RBP12.9□□□□□ -0.34
TRIO-201ENST00000344135 RRBP1Q9P2E9 1410 aaKnown RBP12.9□□□□□ -0.34
TRIO-201ENST00000344135 EPRSP07814 1512 aaKnown RBP12.89□□□□□ -0.35
TRIO-201ENST00000344135 ERCC6L2Q5T890 1561 aa12.87□□□□□ -0.35
TRIO-201ENST00000344135 NUP153P49790 1475 aaKnown RBP12.87□□□□□ -0.35
TRIO-201ENST00000344135 CARMIL2Q6F5E8 1435 aa12.87□□□□□ -0.35
TRIO-201ENST00000344135 HECW1Q76N89 1606 aa12.84□□□□□ -0.35
TRIO-201ENST00000344135 NCOA2Q15596 1464 aa12.84□□□□□ -0.35
TRIO-201ENST00000344135 RAPGEF6Q8TEU7 1601 aa12.82□□□□□ -0.36
TRIO-201ENST00000344135 PTPRGP23470 1445 aa12.81□□□□□ -0.36
TRIO-201ENST00000344135 CCDC18Q5T9S5 1454 aa12.8□□□□□ -0.36
TRIO-201ENST00000344135 FGD6Q6ZV73 1430 aa12.8□□□□□ -0.36
TRIO-201ENST00000344135 ZNF644Q9H582 1327 aaPredicted RBP12.78□□□□□ -0.36
TRIO-201ENST00000344135 EHBP1L1Q8N3D4 1523 aa12.78□□□□□ -0.36
TRIO-201ENST00000344135 CHIC2Q9UKJ5 165 aa12.77□□□□□ -0.37
TRIO-201ENST00000344135 MYOM3Q5VTT5 1437 aa12.77□□□□□ -0.37
TRIO-201ENST00000344135 PTPRKQ15262 1439 aa12.76□□□□□ -0.37
TRIO-201ENST00000344135 SUPT6HQ7KZ85 1726 aaKnown RBP12.76□□□□□ -0.37
TRIO-201ENST00000344135 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
TRIO-201ENST00000344135 ATP10BO94823 1461 aa12.75□□□□□ -0.37
TRIO-201ENST00000344135 RAB3GAP2Q9H2M9 1393 aa12.74□□□□□ -0.37
TRIO-201ENST00000344135 ABCA8O94911 1581 aa12.74□□□□□ -0.37
TRIO-201ENST00000344135 CDK11AQ9UQ88 783 aaPredicted RBP12.74□□□□□ -0.37
TRIO-201ENST00000344135 CLASP1Q7Z460 1538 aa12.74□□□□□ -0.37
TRIO-201ENST00000344135 SHROOM2Q13796 1616 aa12.73□□□□□ -0.37
TRIO-201ENST00000344135 ZNF777Q9ULD5 760 aaPredicted RBP12.73□□□□□ -0.37
TRIO-201ENST00000344135 ARHGEF11O15085 1522 aa12.73□□□□□ -0.37
TRIO-201ENST00000344135 PLEKHD1A6NEE1 506 aa12.72□□□□□ -0.37
TRIO-201ENST00000344135 KIF14Q15058 1648 aa12.71□□□□□ -0.37
TRIO-201ENST00000344135 RRP7BPQ9NSQ0 103 aa12.71□□□□□ -0.37
TRIO-201ENST00000344135 DHX57Q6P158 1386 aaKnown RBP12.71□□□□□ -0.38
TRIO-201ENST00000344135 OSCARQ8IYS5 282 aa12.71□□□□□ -0.38
TRIO-201ENST00000344135 TROQ12816 1431 aaPredicted RBP12.7□□□□□ -0.38
TRIO-201ENST00000344135 UACAQ9BZF9 1416 aa12.7□□□□□ -0.38
TRIO-201ENST00000344135 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
TRIO-201ENST00000344135 PTPN23Q9H3S7 1636 aa12.69□□□□□ -0.38
TRIO-201ENST00000344135 CFDP1Q9UEE9 299 aaPredicted RBP12.67□□□□□ -0.38
TRIO-201ENST00000344135 SETD5Q9C0A6 1442 aa12.67□□□□□ -0.38
TRIO-201ENST00000344135 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.64□□□□□ -0.39
TRIO-201ENST00000344135 GPATCH8Q9UKJ3 1502 aaKnown RBP12.64□□□□□ -0.39
TRIO-201ENST00000344135 ABCC2Q92887 1545 aa12.62□□□□□ -0.39
TRIO-201ENST00000344135 MIA2Q96PC5 1412 aa12.61□□□□□ -0.39
TRIO-201ENST00000344135 NAIPQ13075 1403 aa12.61□□□□□ -0.39
TRIO-201ENST00000344135 TCOF1Q13428 1488 aaKnown RBP12.6□□□□□ -0.39
TRIO-201ENST00000344135 SIN3AQ96ST3 1273 aa12.6□□□□□ -0.39
TRIO-201ENST00000344135 HNRNPMP52272 730 aaKnown RBP eCLIP12.59□□□□□ -0.39
TRIO-201ENST00000344135 ABCC10Q5T3U5 1492 aa12.59□□□□□ -0.39
TRIO-201ENST00000344135 ABCC5O15440 1437 aa12.58□□□□□ -0.39
TRIO-201ENST00000344135 NEUROD1Q13562 356 aa12.58□□□□□ -0.4
TRIO-201ENST00000344135 HFM1A2PYH4 1435 aa12.58□□□□□ -0.4
TRIO-201ENST00000344135 CAMSAP2Q08AD1 1489 aa12.58□□□□□ -0.4
TRIO-201ENST00000344135 KDM6BO15054 1643 aa12.57□□□□□ -0.4
TRIO-201ENST00000344135 DAPK1P53355 1430 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms