RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 P3H3Q8IVL6 736 aa26.37■■□□□ 1.81
ATAD3A-201ENST00000339113 GRIN2BQ13224 1484 aa26.37■■□□□ 1.81
ATAD3A-201ENST00000339113 CTTNBP2Q8WZ74 1663 aa26.34■■□□□ 1.81
ATAD3A-201ENST00000339113 FHAD1B1AJZ9 1412 aa26.33■■□□□ 1.81
ATAD3A-201ENST00000339113 KANK4Q5T7N3 995 aaPredicted RBP26.3■■□□□ 1.8
ATAD3A-201ENST00000339113 ADAMTS12P58397 1594 aa26.29■■□□□ 1.8
ATAD3A-201ENST00000339113 FHOD3Q2V2M9 1422 aa26.27■■□□□ 1.8
ATAD3A-201ENST00000339113 EIF4G3O43432 1585 aaKnown RBP26.26■■□□□ 1.79
ATAD3A-201ENST00000339113 EFCAB5A4FU69 1503 aa26.23■■□□□ 1.79
ATAD3A-201ENST00000339113 SNAPC4Q5SXM2 1469 aa26.21■■□□□ 1.79
ATAD3A-201ENST00000339113 SAMD9Q5K651 1589 aa26.13■■□□□ 1.77
ATAD3A-201ENST00000339113 PCF11O94913 1555 aaKnown RBP26.12■■□□□ 1.77
ATAD3A-201ENST00000339113 ATP1B4Q9UN42 357 aaPredicted RBP26.1■■□□□ 1.77
ATAD3A-201ENST00000339113 TIAM1Q13009 1591 aa26.09■■□□□ 1.77
ATAD3A-201ENST00000339113 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.08■■□□□ 1.76
ATAD3A-201ENST00000339113 MAP3K1Q13233 1512 aa26.07■■□□□ 1.76
ATAD3A-201ENST00000339113 IQGAP2Q13576 1575 aa26.07■■□□□ 1.76
ATAD3A-201ENST00000339113 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
ATAD3A-201ENST00000339113 MAGI1Q96QZ7 1491 aaPredicted RBP26.07■■□□□ 1.76
ATAD3A-201ENST00000339113 CASKIN1Q8WXD9 1431 aa26.05■■□□□ 1.76
ATAD3A-201ENST00000339113 FMN1Q68DA7 1419 aa26.05■■□□□ 1.76
ATAD3A-201ENST00000339113 HNRNPUL2Q1KMD3 747 aaKnown RBP26.04■■□□□ 1.76
ATAD3A-201ENST00000339113 CHMP7Q8WUX9 453 aaPredicted RBP26.03■■□□□ 1.76
ATAD3A-201ENST00000339113 FYCO1Q9BQS8 1478 aa26.03■■□□□ 1.76
ATAD3A-201ENST00000339113 SYNJ2O15056 1496 aa26.01■■□□□ 1.75
ATAD3A-201ENST00000339113 FBLN2P98095 1184 aa26■■□□□ 1.75
ATAD3A-201ENST00000339113 LRRC9Q6ZRR7 1453 aa26■■□□□ 1.75
ATAD3A-201ENST00000339113 KIAA0586Q9BVV6 1533 aa25.99■■□□□ 1.75
ATAD3A-201ENST00000339113 ZEB1P37275 1124 aaPredicted RBP25.98■■□□□ 1.75
ATAD3A-201ENST00000339113 CFAP43Q8NDM7 1665 aa25.95■■□□□ 1.74
ATAD3A-201ENST00000339113 UGGT2Q9NYU1 1516 aa25.95■■□□□ 1.74
ATAD3A-201ENST00000339113 CCER1Q8TC90 406 aaPredicted RBP25.93■■□□□ 1.74
ATAD3A-201ENST00000339113 RRBP1Q9P2E9 1410 aaKnown RBP25.93■■□□□ 1.74
ATAD3A-201ENST00000339113 CEP170Q5SW79 1584 aa25.92■■□□□ 1.74
ATAD3A-201ENST00000339113 DISP1Q96F81 1524 aa25.87■■□□□ 1.73
ATAD3A-201ENST00000339113 PHLDB1Q86UU1 1377 aa25.86■■□□□ 1.73
ATAD3A-201ENST00000339113 NUP160Q12769 1436 aa25.85■■□□□ 1.73
ATAD3A-201ENST00000339113 CCNB3Q8WWL7 1395 aa25.85■■□□□ 1.73
ATAD3A-201ENST00000339113 LRRIQ1Q96JM4 1722 aa25.85■■□□□ 1.73
ATAD3A-201ENST00000339113 KIAA0556O60303 1618 aa25.81■■□□□ 1.72
ATAD3A-201ENST00000339113 JPH4Q96JJ6 628 aa25.77■■□□□ 1.72
ATAD3A-201ENST00000339113 MTUS2Q5JR59 1369 aa25.76■■□□□ 1.71
ATAD3A-201ENST00000339113 ITGAEP38570 1179 aa25.72■■□□□ 1.71
ATAD3A-201ENST00000339113 HECW1Q76N89 1606 aa25.71■■□□□ 1.71
ATAD3A-201ENST00000339113 ARID3CA6NKF2 412 aa25.71■■□□□ 1.71
ATAD3A-201ENST00000339113 EPRSP07814 1512 aaKnown RBP25.7■■□□□ 1.7
ATAD3A-201ENST00000339113 MAGI3Q5TCQ9 1506 aa25.69■■□□□ 1.7
ATAD3A-201ENST00000339113 CCDC18Q5T9S5 1454 aa25.68■■□□□ 1.7
ATAD3A-201ENST00000339113 CDK13Q14004 1512 aaKnown RBP25.67■■□□□ 1.7
ATAD3A-201ENST00000339113 FAM50AQ14320 339 aaKnown RBP25.66■■□□□ 1.7
ATAD3A-201ENST00000339113 CARMIL2Q6F5E8 1435 aa25.63■■□□□ 1.69
ATAD3A-201ENST00000339113 CHD1O14646 1710 aa25.63■■□□□ 1.69
ATAD3A-201ENST00000339113 NCOA2Q15596 1464 aa25.63■■□□□ 1.69
ATAD3A-201ENST00000339113 EHBP1L1Q8N3D4 1523 aa25.62■■□□□ 1.69
ATAD3A-201ENST00000339113 NUP153P49790 1475 aaKnown RBP25.61■■□□□ 1.69
ATAD3A-201ENST00000339113 RAPGEF6Q8TEU7 1601 aa25.59■■□□□ 1.69
ATAD3A-201ENST00000339113 PLB1Q6P1J6 1458 aa25.58■■□□□ 1.69
ATAD3A-201ENST00000339113 FGD6Q6ZV73 1430 aa25.58■■□□□ 1.69
ATAD3A-201ENST00000339113 SUPT6HQ7KZ85 1726 aaKnown RBP25.56■■□□□ 1.68
ATAD3A-201ENST00000339113 PRG4Q92954 1404 aaPredicted RBP25.54■■□□□ 1.68
ATAD3A-201ENST00000339113 ARHGEF11O15085 1522 aa25.54■■□□□ 1.68
ATAD3A-201ENST00000339113 MYOM3Q5VTT5 1437 aa25.53■■□□□ 1.68
ATAD3A-201ENST00000339113 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.52■■□□□ 1.68
ATAD3A-201ENST00000339113 DHX57Q6P158 1386 aaKnown RBP25.48■■□□□ 1.67
ATAD3A-201ENST00000339113 RAB3GAP2Q9H2M9 1393 aa25.45■■□□□ 1.66
ATAD3A-201ENST00000339113 ABCA8O94911 1581 aa25.42■■□□□ 1.66
ATAD3A-201ENST00000339113 SETD5Q9C0A6 1442 aa25.42■■□□□ 1.66
ATAD3A-201ENST00000339113 CDK11AQ9UQ88 783 aaPredicted RBP25.41■■□□□ 1.66
ATAD3A-201ENST00000339113 PTPRGP23470 1445 aa25.41■■□□□ 1.66
ATAD3A-201ENST00000339113 SHROOM2Q13796 1616 aa25.41■■□□□ 1.66
ATAD3A-201ENST00000339113 PTPRKQ15262 1439 aa25.41■■□□□ 1.66
ATAD3A-201ENST00000339113 PELP1Q8IZL8 1130 aaKnown RBP25.4■■□□□ 1.66
ATAD3A-201ENST00000339113 PTPN23Q9H3S7 1636 aa25.38■■□□□ 1.65
ATAD3A-201ENST00000339113 ERCC6L2Q5T890 1561 aa25.37■■□□□ 1.65
ATAD3A-201ENST00000339113 TROQ12816 1431 aaPredicted RBP25.35■■□□□ 1.65
ATAD3A-201ENST00000339113 ATP10BO94823 1461 aa25.35■■□□□ 1.65
ATAD3A-201ENST00000339113 TCOF1Q13428 1488 aaKnown RBP25.33■■□□□ 1.65
ATAD3A-201ENST00000339113 CLASP1Q7Z460 1538 aa25.33■■□□□ 1.64
ATAD3A-201ENST00000339113 MIA2Q96PC5 1412 aa25.32■■□□□ 1.64
ATAD3A-201ENST00000339113 CLSPNQ9HAW4 1339 aa25.31■■□□□ 1.64
ATAD3A-201ENST00000339113 PLEKHD1A6NEE1 506 aa25.26■■□□□ 1.63
ATAD3A-201ENST00000339113 KIF14Q15058 1648 aa25.25■■□□□ 1.63
ATAD3A-201ENST00000339113 ZNF644Q9H582 1327 aaPredicted RBP25.25■■□□□ 1.63
ATAD3A-201ENST00000339113 UACAQ9BZF9 1416 aa25.24■■□□□ 1.63
ATAD3A-201ENST00000339113 CHIC2Q9UKJ5 165 aa25.23■■□□□ 1.63
ATAD3A-201ENST00000339113 HFM1A2PYH4 1435 aa25.22■■□□□ 1.63
ATAD3A-201ENST00000339113 ADCY10Q96PN6 1610 aa25.2■■□□□ 1.62
ATAD3A-201ENST00000339113 NAIPQ13075 1403 aa25.2■■□□□ 1.62
ATAD3A-201ENST00000339113 GPATCH8Q9UKJ3 1502 aaKnown RBP25.19■■□□□ 1.62
ATAD3A-201ENST00000339113 MAPKBP1O60336 1514 aa25.18■■□□□ 1.62
ATAD3A-201ENST00000339113 SCAF1Q9H7N4 1312 aaKnown RBP25.17■■□□□ 1.62
ATAD3A-201ENST00000339113 RRP7BPQ9NSQ0 103 aa25.17■■□□□ 1.62
ATAD3A-201ENST00000339113 CFDP1Q9UEE9 299 aaPredicted RBP25.17■■□□□ 1.62
ATAD3A-201ENST00000339113 ABCC10Q5T3U5 1492 aa25.13■■□□□ 1.61
ATAD3A-201ENST00000339113 ABCC2Q92887 1545 aa25.12■■□□□ 1.61
ATAD3A-201ENST00000339113 ABCC5O15440 1437 aa25.11■■□□□ 1.61
ATAD3A-201ENST00000339113 DAPK1P53355 1430 aa25.11■■□□□ 1.61
ATAD3A-201ENST00000339113 ZNF777Q9ULD5 760 aaPredicted RBP25.11■■□□□ 1.61
ATAD3A-201ENST00000339113 CAMSAP2Q08AD1 1489 aa25.09■■□□□ 1.61
ATAD3A-201ENST00000339113 ITSN2Q9NZM3 1697 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 200.9 ms