RNA–Protein interactions for RNA: ENST00000339113.8

ATAD3A-201, Transcript of ATPase family, AAA domain containing 3A, humanhuman

TSL 2

Gene ATAD3A, Length 2,330 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATAD3A-201ENST00000339113 NISCHQ9Y2I1 1504 aa38.1■■■■□ 3.69
ATAD3A-201ENST00000339113 CCDC180Q9P1Z9 1646 aa32.92■■■□□ 2.86
ATAD3A-201ENST00000339113 ZCCHC6Q5VYS8 1495 aaKnown RBP32.04■■■□□ 2.72
ATAD3A-201ENST00000339113 DCAF8L2P0C7V8 631 aa31.63■■■□□ 2.65
ATAD3A-201ENST00000339113 SHROOM4Q9ULL8 1493 aa31.52■■■□□ 2.64
ATAD3A-201ENST00000339113 DCAF1Q9Y4B6 1507 aa31.37■■■□□ 2.61
ATAD3A-201ENST00000339113 ABCC9O60706 1549 aa31.17■■■□□ 2.58
ATAD3A-201ENST00000339113 MYO15BQ96JP2 1530 aa30.87■■■□□ 2.53
ATAD3A-201ENST00000339113 NACADO15069 1562 aa30.66■■■□□ 2.5
ATAD3A-201ENST00000339113 SCRIBQ14160 1630 aa30.52■■■□□ 2.48
ATAD3A-201ENST00000339113 SUPT5HO00267 1087 aaKnown RBP30.46■■■□□ 2.47
ATAD3A-201ENST00000339113 RB1CC1Q8TDY2 1594 aa30.34■■■□□ 2.45
ATAD3A-201ENST00000339113 UNC13AQ9UPW8 1703 aa29.8■■■□□ 2.36
ATAD3A-201ENST00000339113 RSF1Q96T23 1441 aaPredicted RBP29.74■■■□□ 2.35
ATAD3A-201ENST00000339113 CECR2Q9BXF3 1484 aa29.72■■■□□ 2.35
ATAD3A-201ENST00000339113 PABPN1Q86U42 306 aaKnown RBP eCLIP29.56■■■□□ 2.322e-6■■■■□ 20.4
ATAD3A-201ENST00000339113 BICRAQ9NZM4 1560 aa29.54■■■□□ 2.32
ATAD3A-201ENST00000339113 MROH2BQ7Z745 1585 aa29.53■■■□□ 2.32
ATAD3A-201ENST00000339113 BAZ1AQ9NRL2 1556 aaPredicted RBP29.34■■■□□ 2.29
ATAD3A-201ENST00000339113 WIZO95785 1651 aa29.28■■■□□ 2.28
ATAD3A-201ENST00000339113 CHIC1Q5VXU3 224 aa29.25■■■□□ 2.27
ATAD3A-201ENST00000339113 SMARCA4P51532 1647 aa29.2■■■□□ 2.27
ATAD3A-201ENST00000339113 TOP2AP11388 1531 aaKnown RBP28.88■■■□□ 2.21
ATAD3A-201ENST00000339113 PEG3Q9GZU2 1588 aa28.78■■■□□ 2.2
ATAD3A-201ENST00000339113 ATAD2BQ9ULI0 1458 aa28.71■■■□□ 2.19
ATAD3A-201ENST00000339113 CCDC88BA6NC98 1476 aa28.71■■■□□ 2.19
ATAD3A-201ENST00000339113 SMARCA2P51531 1590 aa28.67■■■□□ 2.18
ATAD3A-201ENST00000339113 EIF4G1Q04637 1599 aaKnown RBP28.59■■■□□ 2.17
ATAD3A-201ENST00000339113 BAZ1BQ9UIG0 1483 aaKnown RBP28.54■■■□□ 2.16
ATAD3A-201ENST00000339113 TRIM41Q8WV44 630 aa28.52■■■□□ 2.16
ATAD3A-201ENST00000339113 NCAPD3P42695 1498 aa28.38■■■□□ 2.13
ATAD3A-201ENST00000339113 HMGXB3Q12766 1538 aa28.28■■■□□ 2.12
ATAD3A-201ENST00000339113 LOC105371045A0A1W2PR82 267 aa28.25■■■□□ 2.11
ATAD3A-201ENST00000339113 ABCC8Q09428 1581 aa28.23■■■□□ 2.11
ATAD3A-201ENST00000339113 FAM9AQ8IZU1 332 aaPredicted RBP28.14■■■□□ 2.1
ATAD3A-201ENST00000339113 CC2D2AQ9P2K1 1620 aa28.12■■■□□ 2.09
ATAD3A-201ENST00000339113 WRNQ14191 1432 aaPredicted RBP eCLIP27.94■■■□□ 2.06
ATAD3A-201ENST00000339113 CFTRP13569 1480 aa27.84■■■□□ 2.05
ATAD3A-201ENST00000339113 SYNJ1O43426 1573 aa27.83■■■□□ 2.05
ATAD3A-201ENST00000339113 EHMT2Q96KQ7 1210 aa27.83■■■□□ 2.05
ATAD3A-201ENST00000339113 SOGA1O94964 1423 aa27.8■■■□□ 2.04
ATAD3A-201ENST00000339113 CADPSQ9ULU8 1353 aa27.71■■■□□ 2.03
ATAD3A-201ENST00000339113 RUSC2Q8N2Y8 1516 aa27.71■■■□□ 2.03
ATAD3A-201ENST00000339113 DNAJC5BQ9UF47 199 aa27.63■■■□□ 2.01
ATAD3A-201ENST00000339113 TOP2BQ02880 1626 aa27.62■■■□□ 2.01
ATAD3A-201ENST00000339113 CSRNP3Q8WYN3 585 aa27.57■■■□□ 2
ATAD3A-201ENST00000339113 EEA1Q15075 1411 aa27.57■■■□□ 2
ATAD3A-201ENST00000339113 CUX1P39880 1505 aa27.56■■■□□ 2
ATAD3A-201ENST00000339113 BIVM-ERCC5R4GMW8 1640 aa27.55■■■□□ 2
ATAD3A-201ENST00000339113 PRDM2Q13029 1718 aa27.54■■■□□ 2
ATAD3A-201ENST00000339113 NESP48681 1621 aa27.48■■□□□ 1.99
ATAD3A-201ENST00000339113 FANCD2Q9BXW9 1451 aa27.4■■□□□ 1.98
ATAD3A-201ENST00000339113 LAMC3Q9Y6N6 1575 aa27.3■■□□□ 1.96
ATAD3A-201ENST00000339113 UBTFP17480 764 aaKnown RBP27.28■■□□□ 1.96
ATAD3A-201ENST00000339113 TNIKQ9UKE5 1360 aa27.28■■□□□ 1.96
ATAD3A-201ENST00000339113 GOLGA3Q08378 1498 aa27.28■■□□□ 1.96
ATAD3A-201ENST00000339113 CEP164Q9UPV0 1460 aa27.25■■□□□ 1.95
ATAD3A-201ENST00000339113 KIF21BO75037 1637 aa27.22■■□□□ 1.95
ATAD3A-201ENST00000339113 FGD5Q6ZNL6 1462 aa27.21■■□□□ 1.95
ATAD3A-201ENST00000339113 PCGF6Q9BYE7 350 aa27.19■■□□□ 1.94
ATAD3A-201ENST00000339113 CEP162Q5TB80 1403 aa27.19■■□□□ 1.94
ATAD3A-201ENST00000339113 KIF27Q86VH2 1401 aa27.18■■□□□ 1.94
ATAD3A-201ENST00000339113 RAPGEF2Q9Y4G8 1499 aa27.17■■□□□ 1.94
ATAD3A-201ENST00000339113 HRCP23327 699 aa27.15■■□□□ 1.94
ATAD3A-201ENST00000339113 PDS5BQ9NTI5 1447 aa27.13■■□□□ 1.93
ATAD3A-201ENST00000339113 TOPBP1Q92547 1522 aa27.13■■□□□ 1.93
ATAD3A-201ENST00000339113 DNMBPQ6XZF7 1577 aa27.13■■□□□ 1.93
ATAD3A-201ENST00000339113 CUX2O14529 1486 aa27.1■■□□□ 1.93
ATAD3A-201ENST00000339113 PRXQ9BXM0 1461 aa27.1■■□□□ 1.93
ATAD3A-201ENST00000339113 URB2Q14146 1524 aaKnown RBP27.07■■□□□ 1.92
ATAD3A-201ENST00000339113 POLA1P09884 1462 aaPredicted RBP27.04■■□□□ 1.92
ATAD3A-201ENST00000339113 RAD54L2Q9Y4B4 1467 aa27.03■■□□□ 1.92
ATAD3A-201ENST00000339113 KIF21AQ7Z4S6 1674 aa27.02■■□□□ 1.92
ATAD3A-201ENST00000339113 TRIM26Q12899 539 aaPredicted RBP27.01■■□□□ 1.91
ATAD3A-201ENST00000339113 IGF1RP08069 1367 aa27■■□□□ 1.91
ATAD3A-201ENST00000339113 ERICH3Q5RHP9 1530 aa26.98■■□□□ 1.91
ATAD3A-201ENST00000339113 PPARGC1BQ86YN6 1023 aaKnown RBP26.96■■□□□ 1.91
ATAD3A-201ENST00000339113 ABCA10Q8WWZ4 1543 aa26.92■■□□□ 1.9
ATAD3A-201ENST00000339113 CLIP1P30622 1438 aa26.91■■□□□ 1.9
ATAD3A-201ENST00000339113 RANGAP1P46060 587 aaPredicted RBP26.89■■□□□ 1.9
ATAD3A-201ENST00000339113 CARMIL1Q5VZK9 1371 aa26.84■■□□□ 1.89
ATAD3A-201ENST00000339113 MRC2Q9UBG0 1479 aa26.77■■□□□ 1.88
ATAD3A-201ENST00000339113 TDRD9Q8NDG6 1382 aaKnown RBP26.77■■□□□ 1.88
ATAD3A-201ENST00000339113 WDR97A6NE52 1622 aa26.76■■□□□ 1.87
ATAD3A-201ENST00000339113 TARBP1Q13395 1621 aaKnown RBP26.68■■□□□ 1.86
ATAD3A-201ENST00000339113 VPS8Q8N3P4 1428 aa26.68■■□□□ 1.86
ATAD3A-201ENST00000339113 TTBK1Q5TCY1 1321 aaPredicted RBP26.67■■□□□ 1.86
ATAD3A-201ENST00000339113 ABCA5Q8WWZ7 1642 aa26.66■■□□□ 1.86
ATAD3A-201ENST00000339113 GAPVD1Q14C86 1478 aa26.65■■□□□ 1.86
ATAD3A-201ENST00000339113 ARAP1Q96P48 1450 aa26.62■■□□□ 1.85
ATAD3A-201ENST00000339113 ERCC6Q03468 1493 aa26.61■■□□□ 1.85
ATAD3A-201ENST00000339113 WDR62O43379 1518 aa26.6■■□□□ 1.85
ATAD3A-201ENST00000339113 CUL7Q14999 1698 aa26.58■■□□□ 1.85
ATAD3A-201ENST00000339113 ARHGAP35Q9NRY4 1499 aa26.57■■□□□ 1.84
ATAD3A-201ENST00000339113 AQRO60306 1485 aaKnown RBP eCLIP26.54■■□□□ 1.845e-7■■■■□ 22.6
ATAD3A-201ENST00000339113 IFT140Q96RY7 1462 aa26.47■■□□□ 1.83
ATAD3A-201ENST00000339113 THOC2Q8NI27 1593 aaKnown RBP26.47■■□□□ 1.83
ATAD3A-201ENST00000339113 ZNF608Q9ULD9 1512 aaPredicted RBP26.46■■□□□ 1.83
ATAD3A-201ENST00000339113 APLP2Q06481 763 aa26.44■■□□□ 1.82
ATAD3A-201ENST00000339113 PBRM1Q86U86 1689 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms