RNA–Protein interactions for RNA: ENST00000333877.8

NELFA-201, Transcript of negative elongation factor complex member A, humanhuman

TSL 2

Gene NELFA, Length 2,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-201ENST00000333877 ZNF608Q9ULD9 1512 aaPredicted RBP28.52■■■□□ 2.16
NELFA-201ENST00000333877 GRIN2BQ13224 1484 aa28.49■■■□□ 2.15
NELFA-201ENST00000333877 FHAD1B1AJZ9 1412 aa28.47■■■□□ 2.15
NELFA-201ENST00000333877 ADAMTS12P58397 1594 aa28.45■■■□□ 2.14
NELFA-201ENST00000333877 EFCAB5A4FU69 1503 aa28.44■■■□□ 2.14
NELFA-201ENST00000333877 P3H3Q8IVL6 736 aa28.43■■■□□ 2.14
NELFA-201ENST00000333877 EIF4G3O43432 1585 aaKnown RBP28.39■■■□□ 2.14
NELFA-201ENST00000333877 KANK4Q5T7N3 995 aaPredicted RBP28.38■■■□□ 2.13
NELFA-201ENST00000333877 FHOD3Q2V2M9 1422 aa28.38■■■□□ 2.13
NELFA-201ENST00000333877 SNAPC4Q5SXM2 1469 aa28.3■■■□□ 2.12
NELFA-201ENST00000333877 SAMD9Q5K651 1589 aa28.3■■■□□ 2.12
NELFA-201ENST00000333877 PCF11O94913 1555 aaKnown RBP28.29■■■□□ 2.12
NELFA-201ENST00000333877 MAP3K1Q13233 1512 aa28.28■■■□□ 2.12
NELFA-201ENST00000333877 TIAM1Q13009 1591 aa28.27■■■□□ 2.12
NELFA-201ENST00000333877 ZEB1P37275 1124 aaPredicted RBP28.27■■■□□ 2.12
NELFA-201ENST00000333877 IQGAP2Q13576 1575 aa28.22■■■□□ 2.11
NELFA-201ENST00000333877 FMN1Q68DA7 1419 aa28.22■■■□□ 2.11
NELFA-201ENST00000333877 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.21■■■□□ 2.11
NELFA-201ENST00000333877 FYCO1Q9BQS8 1478 aa28.21■■■□□ 2.11
NELFA-201ENST00000333877 CASKIN1Q8WXD9 1431 aa28.2■■■□□ 2.11
NELFA-201ENST00000333877 ATP1B4Q9UN42 357 aaPredicted RBP28.2■■■□□ 2.1
NELFA-201ENST00000333877 MAGI1Q96QZ7 1491 aaPredicted RBP28.19■■■□□ 2.1
NELFA-201ENST00000333877 CFAP43Q8NDM7 1665 aa28.17■■■□□ 2.1
NELFA-201ENST00000333877 HNRNPUL2Q1KMD3 747 aaKnown RBP28.17■■■□□ 2.1
NELFA-201ENST00000333877 GRIN2AQ12879 1464 aa28.16■■■□□ 2.1
NELFA-201ENST00000333877 LRRC9Q6ZRR7 1453 aa28.14■■■□□ 2.1
NELFA-201ENST00000333877 CCER1Q8TC90 406 aaPredicted RBP28.13■■■□□ 2.09
NELFA-201ENST00000333877 SYNJ2O15056 1496 aa28.11■■■□□ 2.09
NELFA-201ENST00000333877 KIAA0586Q9BVV6 1533 aa28.09■■■□□ 2.09
NELFA-201ENST00000333877 RRBP1Q9P2E9 1410 aaKnown RBP28.09■■■□□ 2.09
NELFA-201ENST00000333877 CHMP7Q8WUX9 453 aaPredicted RBP28.08■■■□□ 2.09
NELFA-201ENST00000333877 UGGT2Q9NYU1 1516 aa28.07■■■□□ 2.08
NELFA-201ENST00000333877 FBLN2P98095 1184 aa28.03■■■□□ 2.08
NELFA-201ENST00000333877 CCNB3Q8WWL7 1395 aa28■■■□□ 2.07
NELFA-201ENST00000333877 CEP170Q5SW79 1584 aa27.99■■■□□ 2.07
NELFA-201ENST00000333877 LRRIQ1Q96JM4 1722 aa27.98■■■□□ 2.07
NELFA-201ENST00000333877 PHLDB1Q86UU1 1377 aa27.94■■■□□ 2.06
NELFA-201ENST00000333877 DISP1Q96F81 1524 aa27.94■■■□□ 2.06
NELFA-201ENST00000333877 KIAA0556O60303 1618 aa27.93■■■□□ 2.06
NELFA-201ENST00000333877 NUP160Q12769 1436 aa27.91■■■□□ 2.06
NELFA-201ENST00000333877 HECW1Q76N89 1606 aa27.88■■■□□ 2.05
NELFA-201ENST00000333877 MTUS2Q5JR59 1369 aa27.88■■■□□ 2.05
NELFA-201ENST00000333877 CCDC18Q5T9S5 1454 aa27.85■■■□□ 2.05
NELFA-201ENST00000333877 ITGAEP38570 1179 aa27.8■■■□□ 2.04
NELFA-201ENST00000333877 EPRSP07814 1512 aaKnown RBP27.79■■■□□ 2.04
NELFA-201ENST00000333877 JPH4Q96JJ6 628 aa27.79■■■□□ 2.04
NELFA-201ENST00000333877 EHBP1L1Q8N3D4 1523 aa27.78■■■□□ 2.04
NELFA-201ENST00000333877 FAM50AQ14320 339 aaKnown RBP27.76■■■□□ 2.03
NELFA-201ENST00000333877 MAGI3Q5TCQ9 1506 aa27.74■■■□□ 2.03
NELFA-201ENST00000333877 SUPT6HQ7KZ85 1726 aaKnown RBP27.74■■■□□ 2.03
NELFA-201ENST00000333877 CARMIL2Q6F5E8 1435 aa27.74■■■□□ 2.03
NELFA-201ENST00000333877 CDK13Q14004 1512 aaKnown RBP27.73■■■□□ 2.03
NELFA-201ENST00000333877 NCOA2Q15596 1464 aa27.73■■■□□ 2.03
NELFA-201ENST00000333877 CHD1O14646 1710 aa27.73■■■□□ 2.03
NELFA-201ENST00000333877 RAPGEF6Q8TEU7 1601 aa27.71■■■□□ 2.03
NELFA-201ENST00000333877 ARID3CA6NKF2 412 aa27.7■■■□□ 2.02
NELFA-201ENST00000333877 FGD6Q6ZV73 1430 aa27.69■■■□□ 2.02
NELFA-201ENST00000333877 NUP153P49790 1475 aaKnown RBP27.67■■■□□ 2.02
NELFA-201ENST00000333877 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.67■■■□□ 2.024e-7■■■■■ 33.5
NELFA-201ENST00000333877 MYOM3Q5VTT5 1437 aa27.64■■■□□ 2.02
NELFA-201ENST00000333877 ARHGEF11O15085 1522 aa27.64■■■□□ 2.02
NELFA-201ENST00000333877 PLB1Q6P1J6 1458 aa27.61■■■□□ 2.01
NELFA-201ENST00000333877 DHX57Q6P158 1386 aaKnown RBP27.59■■■□□ 2.01
NELFA-201ENST00000333877 PRG4Q92954 1404 aaPredicted RBP27.56■■■□□ 2
NELFA-201ENST00000333877 RAB3GAP2Q9H2M9 1393 aa27.55■■■□□ 2
NELFA-201ENST00000333877 SETD5Q9C0A6 1442 aa27.54■■■□□ 2
NELFA-201ENST00000333877 CDK11AQ9UQ88 783 aaPredicted RBP27.52■■■□□ 2
NELFA-201ENST00000333877 PTPN23Q9H3S7 1636 aa27.52■■■□□ 2
NELFA-201ENST00000333877 CLSPNQ9HAW4 1339 aa27.49■■□□□ 1.99
NELFA-201ENST00000333877 ABCA8O94911 1581 aa27.49■■□□□ 1.99
NELFA-201ENST00000333877 SHROOM2Q13796 1616 aa27.48■■□□□ 1.99
NELFA-201ENST00000333877 TCOF1Q13428 1488 aaKnown RBP27.44■■□□□ 1.98
NELFA-201ENST00000333877 PTPRGP23470 1445 aa27.44■■□□□ 1.98
NELFA-201ENST00000333877 PTPRKQ15262 1439 aa27.43■■□□□ 1.98
NELFA-201ENST00000333877 MIA2Q96PC5 1412 aa27.43■■□□□ 1.98
NELFA-201ENST00000333877 TROQ12816 1431 aaPredicted RBP27.42■■□□□ 1.98
NELFA-201ENST00000333877 ATP10BO94823 1461 aa27.36■■□□□ 1.97
NELFA-201ENST00000333877 CLASP1Q7Z460 1538 aa27.35■■□□□ 1.97
NELFA-201ENST00000333877 ERCC6L2Q5T890 1561 aa27.33■■□□□ 1.97
NELFA-201ENST00000333877 ADCY10Q96PN6 1610 aa27.33■■□□□ 1.97
NELFA-201ENST00000333877 HFM1A2PYH4 1435 aa27.32■■□□□ 1.96
NELFA-201ENST00000333877 KIF14Q15058 1648 aa27.31■■□□□ 1.96
NELFA-201ENST00000333877 PLEKHD1A6NEE1 506 aa27.3■■□□□ 1.96
NELFA-201ENST00000333877 MAPKBP1O60336 1514 aa27.27■■□□□ 1.96
NELFA-201ENST00000333877 UACAQ9BZF9 1416 aa27.27■■□□□ 1.96
NELFA-201ENST00000333877 NAIPQ13075 1403 aa27.26■■□□□ 1.95
NELFA-201ENST00000333877 ITSN2Q9NZM3 1697 aa27.24■■□□□ 1.95
NELFA-201ENST00000333877 CHIC2Q9UKJ5 165 aa27.24■■□□□ 1.95
NELFA-201ENST00000333877 GPATCH8Q9UKJ3 1502 aaKnown RBP27.22■■□□□ 1.95
NELFA-201ENST00000333877 ZNF644Q9H582 1327 aaPredicted RBP27.22■■□□□ 1.95
NELFA-201ENST00000333877 CFDP1Q9UEE9 299 aaPredicted RBP27.2■■□□□ 1.95
NELFA-201ENST00000333877 RRP7BPQ9NSQ0 103 aa27.19■■□□□ 1.94
NELFA-201ENST00000333877 DAPK1P53355 1430 aa27.18■■□□□ 1.94
NELFA-201ENST00000333877 DNMT1P26358 1616 aaKnown RBP27.17■■□□□ 1.94
NELFA-201ENST00000333877 GCC2Q8IWJ2 1684 aa27.17■■□□□ 1.94
NELFA-201ENST00000333877 AKNAQ7Z591 1439 aa27.16■■□□□ 1.94
NELFA-201ENST00000333877 ABCC2Q92887 1545 aa27.16■■□□□ 1.94
NELFA-201ENST00000333877 ABCC10Q5T3U5 1492 aa27.16■■□□□ 1.94
NELFA-201ENST00000333877 CAMSAP2Q08AD1 1489 aa27.15■■□□□ 1.94
NELFA-201ENST00000333877 ABCC5O15440 1437 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms