RNA–Protein interactions for RNA: ENST00000308783.9

KDM2A-201, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-201ENST00000308783 P3H3Q8IVL6 736 aa15.7■□□□□ 0.1
KDM2A-201ENST00000308783 ARHGAP35Q9NRY4 1499 aa15.69■□□□□ 0.1
KDM2A-201ENST00000308783 TARBP1Q13395 1621 aaKnown RBP15.69■□□□□ 0.1
KDM2A-201ENST00000308783 AQRO60306 1485 aaKnown RBP eCLIP15.69■□□□□ 0.18e-7■■■■□ 21.3
KDM2A-201ENST00000308783 ERCC6Q03468 1493 aa15.69■□□□□ 0.1
KDM2A-201ENST00000308783 ABCA5Q8WWZ7 1642 aa15.67■□□□□ 0.1
KDM2A-201ENST00000308783 ZNF608Q9ULD9 1512 aaPredicted RBP15.64■□□□□ 0.09
KDM2A-201ENST00000308783 KANK4Q5T7N3 995 aaPredicted RBP15.62■□□□□ 0.09
KDM2A-201ENST00000308783 WDR62O43379 1518 aa15.61■□□□□ 0.09
KDM2A-201ENST00000308783 EIF5BO60841 1220 aaKnown RBP15.61■□□□□ 0.09
KDM2A-201ENST00000308783 ANP32EQ9BTT0 268 aa15.61■□□□□ 0.09
KDM2A-201ENST00000308783 CUL7Q14999 1698 aa15.6■□□□□ 0.09
KDM2A-201ENST00000308783 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.57■□□□□ 0.08
KDM2A-201ENST00000308783 THOC2Q8NI27 1593 aaKnown RBP15.55■□□□□ 0.08
KDM2A-201ENST00000308783 FHOD3Q2V2M9 1422 aa15.55■□□□□ 0.08
KDM2A-201ENST00000308783 ATP1B4Q9UN42 357 aaPredicted RBP15.54■□□□□ 0.08
KDM2A-201ENST00000308783 PBRM1Q86U86 1689 aa15.54■□□□□ 0.08
KDM2A-201ENST00000308783 IFT140Q96RY7 1462 aa15.53■□□□□ 0.08
KDM2A-201ENST00000308783 HNRNPUL2Q1KMD3 747 aaKnown RBP15.52■□□□□ 0.07
KDM2A-201ENST00000308783 CTTNBP2Q8WZ74 1663 aa15.51■□□□□ 0.07
KDM2A-201ENST00000308783 GRIN2BQ13224 1484 aa15.5■□□□□ 0.07
KDM2A-201ENST00000308783 ANO8Q9HCE9 1232 aaPredicted RBP15.5■□□□□ 0.07
KDM2A-201ENST00000308783 FHAD1B1AJZ9 1412 aa15.48■□□□□ 0.07
KDM2A-201ENST00000308783 EIF4G3O43432 1585 aaKnown RBP15.47■□□□□ 0.07
KDM2A-201ENST00000308783 ADAMTS12P58397 1594 aa15.46■□□□□ 0.07
KDM2A-201ENST00000308783 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.06
KDM2A-201ENST00000308783 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
KDM2A-201ENST00000308783 FBLN2P98095 1184 aa15.44■□□□□ 0.06
KDM2A-201ENST00000308783 PCF11O94913 1555 aaKnown RBP15.44■□□□□ 0.06
KDM2A-201ENST00000308783 CCER1Q8TC90 406 aaPredicted RBP15.43■□□□□ 0.06
KDM2A-201ENST00000308783 EFCAB5A4FU69 1503 aa15.4■□□□□ 0.06
KDM2A-201ENST00000308783 TIAM1Q13009 1591 aa15.39■□□□□ 0.05
KDM2A-201ENST00000308783 CHMP7Q8WUX9 453 aaPredicted RBP15.37■□□□□ 0.05
KDM2A-201ENST00000308783 SAMD9Q5K651 1589 aa15.37■□□□□ 0.05
KDM2A-201ENST00000308783 YTHDC1Q96MU7 727 aaKnown RBP15.37■□□□□ 0.05
KDM2A-201ENST00000308783 ARID3CA6NKF2 412 aa15.36■□□□□ 0.05
KDM2A-201ENST00000308783 ITGAEP38570 1179 aa15.35■□□□□ 0.05
KDM2A-201ENST00000308783 IQGAP2Q13576 1575 aa15.35■□□□□ 0.05
KDM2A-201ENST00000308783 GRIN2AQ12879 1464 aa15.35■□□□□ 0.05
KDM2A-201ENST00000308783 LRRC9Q6ZRR7 1453 aa15.35■□□□□ 0.05
KDM2A-201ENST00000308783 CASKIN1Q8WXD9 1431 aa15.34■□□□□ 0.05
KDM2A-201ENST00000308783 CCDC136Q96JN2 1154 aa15.33■□□□□ 0.04
KDM2A-201ENST00000308783 FMN1Q68DA7 1419 aa15.33■□□□□ 0.04
KDM2A-201ENST00000308783 ZEB1P37275 1124 aaPredicted RBP15.33■□□□□ 0.04
KDM2A-201ENST00000308783 DAXXQ9UER7 740 aaPredicted RBP15.32■□□□□ 0.04
KDM2A-201ENST00000308783 FYCO1Q9BQS8 1478 aa15.32■□□□□ 0.04
KDM2A-201ENST00000308783 PHLDB1Q86UU1 1377 aa15.31■□□□□ 0.04
KDM2A-201ENST00000308783 MAGI1Q96QZ7 1491 aaPredicted RBP15.3■□□□□ 0.04
KDM2A-201ENST00000308783 LRRIQ1Q96JM4 1722 aa15.29■□□□□ 0.04
KDM2A-201ENST00000308783 SYNJ2O15056 1496 aa15.29■□□□□ 0.04
KDM2A-201ENST00000308783 MAP3K1Q13233 1512 aa15.29■□□□□ 0.04
KDM2A-201ENST00000308783 RRBP1Q9P2E9 1410 aaKnown RBP15.29■□□□□ 0.04
KDM2A-201ENST00000308783 CEP170Q5SW79 1584 aa15.28■□□□□ 0.04
KDM2A-201ENST00000308783 CCNB3Q8WWL7 1395 aa15.28■□□□□ 0.04
KDM2A-201ENST00000308783 KIAA0586Q9BVV6 1533 aa15.28■□□□□ 0.04
KDM2A-201ENST00000308783 CFAP43Q8NDM7 1665 aa15.28■□□□□ 0.04
KDM2A-201ENST00000308783 DISP1Q96F81 1524 aa15.25■□□□□ 0.03
KDM2A-201ENST00000308783 FAM50AQ14320 339 aaKnown RBP15.24■□□□□ 0.03
KDM2A-201ENST00000308783 UGGT2Q9NYU1 1516 aa15.24■□□□□ 0.03
KDM2A-201ENST00000308783 MTUS2Q5JR59 1369 aa15.22■□□□□ 0.03
KDM2A-201ENST00000308783 JPH4Q96JJ6 628 aa15.21■□□□□ 0.03
KDM2A-201ENST00000308783 KIAA0556O60303 1618 aa15.2■□□□□ 0.02
KDM2A-201ENST00000308783 CDK13Q14004 1512 aaKnown RBP15.2■□□□□ 0.02
KDM2A-201ENST00000308783 MAGI3Q5TCQ9 1506 aa15.19■□□□□ 0.02
KDM2A-201ENST00000308783 NUP160Q12769 1436 aa15.19■□□□□ 0.02
KDM2A-201ENST00000308783 EPRSP07814 1512 aaKnown RBP15.16■□□□□ 0.02
KDM2A-201ENST00000308783 PODXL2Q9NZ53 605 aa15.15■□□□□ 0.02
KDM2A-201ENST00000308783 NCOA2Q15596 1464 aa15.13■□□□□ 0.01
KDM2A-201ENST00000308783 PLB1Q6P1J6 1458 aa15.13■□□□□ 0.01
KDM2A-201ENST00000308783 HECW1Q76N89 1606 aa15.12■□□□□ 0.01
KDM2A-201ENST00000308783 SALL2Q9Y467 1007 aaPredicted RBP15.11■□□□□ 0.01
KDM2A-201ENST00000308783 CHD1O14646 1710 aa15.11■□□□□ 0.01
KDM2A-201ENST00000308783 NUP153P49790 1475 aaKnown RBP15.11■□□□□ 0.01
KDM2A-201ENST00000308783 FGD6Q6ZV73 1430 aa15.1■□□□□ 0.01
KDM2A-201ENST00000308783 CCDC18Q5T9S5 1454 aa15.09■□□□□ 0.01
KDM2A-201ENST00000308783 DHX57Q6P158 1386 aaKnown RBP15.09■□□□□ 0.01
KDM2A-201ENST00000308783 RAB3GAP2Q9H2M9 1393 aa15.08■□□□□ 0
KDM2A-201ENST00000308783 EHBP1L1Q8N3D4 1523 aa15.07■□□□□ 0
KDM2A-201ENST00000308783 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.07■□□□□ 0
KDM2A-201ENST00000308783 CARMIL2Q6F5E8 1435 aa15.07■□□□□ 0
KDM2A-201ENST00000308783 RAPGEF6Q8TEU7 1601 aa15.07■□□□□ 0
KDM2A-201ENST00000308783 PRG4Q92954 1404 aaPredicted RBP15.06■□□□□ 0
KDM2A-201ENST00000308783 UBE2Q2Q8WVN8 375 aa15.06■□□□□ 0
KDM2A-201ENST00000308783 SUPT6HQ7KZ85 1726 aaKnown RBP15.06■□□□□ 0
KDM2A-201ENST00000308783 MYOM3Q5VTT5 1437 aa15.06■□□□□ 0
KDM2A-201ENST00000308783 PTPRKQ15262 1439 aa15.05■□□□□ 0
KDM2A-201ENST00000308783 PKNOX2Q96KN3 472 aa15.03■□□□□ -0
KDM2A-201ENST00000308783 ARHGEF11O15085 1522 aa15.02■□□□□ -0
KDM2A-201ENST00000308783 SETD5Q9C0A6 1442 aa15.01□□□□□ -0.01
KDM2A-201ENST00000308783 ERCC6L2Q5T890 1561 aa15.01□□□□□ -0.01
KDM2A-201ENST00000308783 CHIC2Q9UKJ5 165 aa15.01□□□□□ -0.01
KDM2A-201ENST00000308783 ZNF644Q9H582 1327 aaPredicted RBP15□□□□□ -0.01
KDM2A-201ENST00000308783 DIEXFQ68CQ4 756 aaKnown RBP14.99□□□□□ -0.01
KDM2A-201ENST00000308783 PTPN23Q9H3S7 1636 aa14.98□□□□□ -0.01
KDM2A-201ENST00000308783 PTPRGP23470 1445 aa14.97□□□□□ -0.01
KDM2A-201ENST00000308783 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.97□□□□□ -0.01
KDM2A-201ENST00000308783 RRP7BPQ9NSQ0 103 aa14.96□□□□□ -0.02
KDM2A-201ENST00000308783 CDK11AQ9UQ88 783 aaPredicted RBP14.96□□□□□ -0.02
KDM2A-201ENST00000308783 ABCA8O94911 1581 aa14.95□□□□□ -0.02
KDM2A-201ENST00000308783 ATP10BO94823 1461 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms