RNA–Protein interactions for RNA: ENST00000304101.8

KCNS3-201, Transcript of potassium voltage-gated channel modifier subfamily S member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNS3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3-201ENST00000304101 VPS8Q8N3P4 1428 aa31.46■■■□□ 2.63
KCNS3-201ENST00000304101 ADAMTS12P58397 1594 aa31.45■■■□□ 2.62
KCNS3-201ENST00000304101 FHAD1B1AJZ9 1412 aa31.44■■■□□ 2.62
KCNS3-201ENST00000304101 FBLN2P98095 1184 aa31.38■■■□□ 2.61
KCNS3-201ENST00000304101 P3H3Q8IVL6 736 aa31.33■■■□□ 2.61
KCNS3-201ENST00000304101 ARHGAP35Q9NRY4 1499 aa31.3■■■□□ 2.6
KCNS3-201ENST00000304101 ARAP1Q96P48 1450 aa31.3■■■□□ 2.6
KCNS3-201ENST00000304101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP31.29■■■□□ 2.6
KCNS3-201ENST00000304101 CHMP7Q8WUX9 453 aaPredicted RBP31.29■■■□□ 2.6
KCNS3-201ENST00000304101 CTTNBP2Q8WZ74 1663 aa31.27■■■□□ 2.6
KCNS3-201ENST00000304101 MAGI1Q96QZ7 1491 aaPredicted RBP31.26■■■□□ 2.6
KCNS3-201ENST00000304101 CCER1Q8TC90 406 aaPredicted RBP31.25■■■□□ 2.59
KCNS3-201ENST00000304101 APLP2Q06481 763 aa31.23■■■□□ 2.59
KCNS3-201ENST00000304101 GRIN2AQ12879 1464 aa31.22■■■□□ 2.59
KCNS3-201ENST00000304101 SYNJ2O15056 1496 aa31.2■■■□□ 2.59
KCNS3-201ENST00000304101 FHOD3Q2V2M9 1422 aa31.13■■■□□ 2.57
KCNS3-201ENST00000304101 CEP170Q5SW79 1584 aa31.07■■■□□ 2.56
KCNS3-201ENST00000304101 IQGAP2Q13576 1575 aa31.07■■■□□ 2.56
KCNS3-201ENST00000304101 KIAA0586Q9BVV6 1533 aa30.99■■■□□ 2.55
KCNS3-201ENST00000304101 EFCAB5A4FU69 1503 aa30.98■■■□□ 2.55
KCNS3-201ENST00000304101 ATP1B4Q9UN42 357 aaPredicted RBP30.98■■■□□ 2.55
KCNS3-201ENST00000304101 CHD1O14646 1710 aa30.96■■■□□ 2.55
KCNS3-201ENST00000304101 SAMD9Q5K651 1589 aa30.96■■■□□ 2.55
KCNS3-201ENST00000304101 NUP160Q12769 1436 aa30.95■■■□□ 2.54
KCNS3-201ENST00000304101 HNRNPUL2Q1KMD3 747 aaKnown RBP30.88■■■□□ 2.53
KCNS3-201ENST00000304101 PCF11O94913 1555 aaKnown RBP30.86■■■□□ 2.53
KCNS3-201ENST00000304101 KANK4Q5T7N3 995 aaPredicted RBP30.86■■■□□ 2.53
KCNS3-201ENST00000304101 UGGT2Q9NYU1 1516 aa30.86■■■□□ 2.53
KCNS3-201ENST00000304101 JPH4Q96JJ6 628 aa30.84■■■□□ 2.53
KCNS3-201ENST00000304101 DISP1Q96F81 1524 aa30.83■■■□□ 2.53
KCNS3-201ENST00000304101 FMN1Q68DA7 1419 aa30.77■■■□□ 2.52
KCNS3-201ENST00000304101 KIAA0556O60303 1618 aa30.76■■■□□ 2.52
KCNS3-201ENST00000304101 ARID3CA6NKF2 412 aa30.74■■■□□ 2.51
KCNS3-201ENST00000304101 CASKIN1Q8WXD9 1431 aa30.72■■■□□ 2.51
KCNS3-201ENST00000304101 FYCO1Q9BQS8 1478 aa30.68■■■□□ 2.5
KCNS3-201ENST00000304101 MAP3K1Q13233 1512 aa30.66■■■□□ 2.5
KCNS3-201ENST00000304101 RRBP1Q9P2E9 1410 aaKnown RBP30.66■■■□□ 2.5
KCNS3-201ENST00000304101 TIAM1Q13009 1591 aa30.65■■■□□ 2.5
KCNS3-201ENST00000304101 PRG4Q92954 1404 aaPredicted RBP30.65■■■□□ 2.5
KCNS3-201ENST00000304101 CARMIL2Q6F5E8 1435 aa30.62■■■□□ 2.49
KCNS3-201ENST00000304101 LRRIQ1Q96JM4 1722 aa30.58■■■□□ 2.49
KCNS3-201ENST00000304101 ERCC6L2Q5T890 1561 aa30.56■■■□□ 2.48
KCNS3-201ENST00000304101 LRRC9Q6ZRR7 1453 aa30.54■■■□□ 2.48
KCNS3-201ENST00000304101 CLASP1Q7Z460 1538 aa30.54■■■□□ 2.48
KCNS3-201ENST00000304101 CFAP43Q8NDM7 1665 aa30.53■■■□□ 2.48
KCNS3-201ENST00000304101 PLB1Q6P1J6 1458 aa30.53■■■□□ 2.48
KCNS3-201ENST00000304101 CCNB3Q8WWL7 1395 aa30.53■■■□□ 2.48
KCNS3-201ENST00000304101 CDK13Q14004 1512 aaKnown RBP30.49■■■□□ 2.47
KCNS3-201ENST00000304101 SHROOM2Q13796 1616 aa30.48■■■□□ 2.47
KCNS3-201ENST00000304101 HECW1Q76N89 1606 aa30.47■■■□□ 2.47
KCNS3-201ENST00000304101 EPRSP07814 1512 aaKnown RBP30.44■■■□□ 2.46
KCNS3-201ENST00000304101 RAPGEF6Q8TEU7 1601 aa30.44■■■□□ 2.46
KCNS3-201ENST00000304101 NUP153P49790 1475 aaKnown RBP30.43■■■□□ 2.46
KCNS3-201ENST00000304101 OSCARQ8IYS5 282 aa30.42■■■□□ 2.46
KCNS3-201ENST00000304101 PTPRGP23470 1445 aa30.42■■■□□ 2.46
KCNS3-201ENST00000304101 MTUS2Q5JR59 1369 aa30.41■■■□□ 2.46
KCNS3-201ENST00000304101 MAGI3Q5TCQ9 1506 aa30.39■■■□□ 2.46
KCNS3-201ENST00000304101 CLSPNQ9HAW4 1339 aa30.38■■■□□ 2.45
KCNS3-201ENST00000304101 PHLDB1Q86UU1 1377 aa30.37■■■□□ 2.45
KCNS3-201ENST00000304101 CCDC18Q5T9S5 1454 aa30.36■■■□□ 2.45
KCNS3-201ENST00000304101 DHX57Q6P158 1386 aaKnown RBP30.35■■■□□ 2.45
KCNS3-201ENST00000304101 DIEXFQ68CQ4 756 aaKnown RBP30.34■■■□□ 2.45
KCNS3-201ENST00000304101 ZNF316A6NFI3 1004 aaPredicted RBP30.31■■■□□ 2.44
KCNS3-201ENST00000304101 ABCA8O94911 1581 aa30.3■■■□□ 2.44
KCNS3-201ENST00000304101 ITGAEP38570 1179 aa30.24■■■□□ 2.43
KCNS3-201ENST00000304101 EHBP1L1Q8N3D4 1523 aa30.23■■■□□ 2.43
KCNS3-201ENST00000304101 NCOA2Q15596 1464 aa30.22■■■□□ 2.43
KCNS3-201ENST00000304101 UACAQ9BZF9 1416 aa30.2■■■□□ 2.43
KCNS3-201ENST00000304101 ATP10BO94823 1461 aa30.19■■■□□ 2.42
KCNS3-201ENST00000304101 FAM50AQ14320 339 aaKnown RBP30.18■■■□□ 2.42
KCNS3-201ENST00000304101 SUPT6HQ7KZ85 1726 aaKnown RBP30.15■■■□□ 2.42
KCNS3-201ENST00000304101 CDK11AQ9UQ88 783 aaPredicted RBP30.13■■■□□ 2.41
KCNS3-201ENST00000304101 RAB3GAP2Q9H2M9 1393 aa30.12■■■□□ 2.41
KCNS3-201ENST00000304101 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.07■■■□□ 2.4
KCNS3-201ENST00000304101 ABCC2Q92887 1545 aa30.07■■■□□ 2.4
KCNS3-201ENST00000304101 SETD5Q9C0A6 1442 aa30.07■■■□□ 2.4
KCNS3-201ENST00000304101 TROQ12816 1431 aaPredicted RBP30.06■■■□□ 2.4
KCNS3-201ENST00000304101 FGD6Q6ZV73 1430 aa30.06■■■□□ 2.4
KCNS3-201ENST00000304101 PLEKHD1A6NEE1 506 aa30.06■■■□□ 2.4
KCNS3-201ENST00000304101 ARHGEF11O15085 1522 aa30.05■■■□□ 2.4
KCNS3-201ENST00000304101 MYOM3Q5VTT5 1437 aa30.05■■■□□ 2.4
KCNS3-201ENST00000304101 KIF14Q15058 1648 aa30.03■■■□□ 2.4
KCNS3-201ENST00000304101 ADCY10Q96PN6 1610 aa29.95■■■□□ 2.38
KCNS3-201ENST00000304101 MAPKBP1O60336 1514 aa29.93■■■□□ 2.38
KCNS3-201ENST00000304101 KCNH8Q96L42 1107 aa29.92■■■□□ 2.38
KCNS3-201ENST00000304101 ZCCHC11Q5TAX3 1644 aaKnown RBP29.92■■■□□ 2.38
KCNS3-201ENST00000304101 UHRF1BP1LA0JNW5 1464 aa29.92■■■□□ 2.38
KCNS3-201ENST00000304101 ZNF644Q9H582 1327 aaPredicted RBP29.91■■■□□ 2.38
KCNS3-201ENST00000304101 PTPN23Q9H3S7 1636 aa29.9■■■□□ 2.38
KCNS3-201ENST00000304101 KDM5BQ9UGL1 1544 aa29.87■■■□□ 2.37
KCNS3-201ENST00000304101 ZNF777Q9ULD5 760 aaPredicted RBP29.87■■■□□ 2.37
KCNS3-201ENST00000304101 GPATCH8Q9UKJ3 1502 aaKnown RBP29.83■■■□□ 2.37
KCNS3-201ENST00000304101 PTPRKQ15262 1439 aa29.83■■■□□ 2.37
KCNS3-201ENST00000304101 CFDP1Q9UEE9 299 aaPredicted RBP29.83■■■□□ 2.37
KCNS3-201ENST00000304101 CYB5RLQ6IPT4 315 aa29.82■■■□□ 2.36
KCNS3-201ENST00000304101 ABCC10Q5T3U5 1492 aa29.81■■■□□ 2.36
KCNS3-201ENST00000304101 MIA2Q96PC5 1412 aa29.79■■■□□ 2.36
KCNS3-201ENST00000304101 CHIC2Q9UKJ5 165 aa29.78■■■□□ 2.36
KCNS3-201ENST00000304101 TCOF1Q13428 1488 aaKnown RBP29.77■■■□□ 2.36
KCNS3-201ENST00000304101 RIMBP3CA6NJZ7 1639 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms