RNA–Protein interactions for RNA: ENST00000304101.8

KCNS3-201, Transcript of potassium voltage-gated channel modifier subfamily S member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCNS3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNS3-201ENST00000304101 NISCHQ9Y2I1 1504 aa45.28■■■■■ 4.84
KCNS3-201ENST00000304101 CCDC180Q9P1Z9 1646 aa39.36■■■■□ 3.89
KCNS3-201ENST00000304101 ZCCHC6Q5VYS8 1495 aaKnown RBP37.98■■■■□ 3.67
KCNS3-201ENST00000304101 DCAF8L2P0C7V8 631 aa37.88■■■■□ 3.65
KCNS3-201ENST00000304101 ABCC9O60706 1549 aa37.79■■■■□ 3.64
KCNS3-201ENST00000304101 SHROOM4Q9ULL8 1493 aa37.26■■■■□ 3.56
KCNS3-201ENST00000304101 DCAF1Q9Y4B6 1507 aa37.22■■■■□ 3.55
KCNS3-201ENST00000304101 MYO15BQ96JP2 1530 aa36.78■■■■□ 3.48
KCNS3-201ENST00000304101 NACADO15069 1562 aa36.75■■■■□ 3.47
KCNS3-201ENST00000304101 RB1CC1Q8TDY2 1594 aa36.54■■■■□ 3.44
KCNS3-201ENST00000304101 SCRIBQ14160 1630 aa36.53■■■■□ 3.44
KCNS3-201ENST00000304101 UNC13AQ9UPW8 1703 aa35.88■■■■□ 3.33
KCNS3-201ENST00000304101 SUPT5HO00267 1087 aaKnown RBP35.8■■■■□ 3.32
KCNS3-201ENST00000304101 PABPN1Q86U42 306 aaKnown RBP eCLIP35.73■■■■□ 3.31
KCNS3-201ENST00000304101 BICRAQ9NZM4 1560 aa35.54■■■■□ 3.28
KCNS3-201ENST00000304101 CECR2Q9BXF3 1484 aa35.39■■■■□ 3.26
KCNS3-201ENST00000304101 RSF1Q96T23 1441 aaPredicted RBP35.15■■■■□ 3.22
KCNS3-201ENST00000304101 MROH2BQ7Z745 1585 aa35.1■■■■□ 3.21
KCNS3-201ENST00000304101 BAZ1AQ9NRL2 1556 aaPredicted RBP34.92■■■■□ 3.18
KCNS3-201ENST00000304101 SMARCA4P51532 1647 aa34.84■■■■□ 3.17
KCNS3-201ENST00000304101 WIZO95785 1651 aa34.81■■■■□ 3.16
KCNS3-201ENST00000304101 CHIC1Q5VXU3 224 aa34.69■■■■□ 3.14
KCNS3-201ENST00000304101 EIF4G1Q04637 1599 aaKnown RBP34.48■■■■□ 3.11
KCNS3-201ENST00000304101 ATAD2BQ9ULI0 1458 aa34.34■■■■□ 3.09
KCNS3-201ENST00000304101 TOP2AP11388 1531 aaKnown RBP34.29■■■■□ 3.08
KCNS3-201ENST00000304101 PEG3Q9GZU2 1588 aa34.28■■■■□ 3.08
KCNS3-201ENST00000304101 SMARCA2P51531 1590 aa34.2■■■■□ 3.07
KCNS3-201ENST00000304101 BAZ1BQ9UIG0 1483 aaKnown RBP34.16■■■■□ 3.06
KCNS3-201ENST00000304101 CCDC88BA6NC98 1476 aa34.06■■■■□ 3.04
KCNS3-201ENST00000304101 CC2D2AQ9P2K1 1620 aa34.06■■■■□ 3.04
KCNS3-201ENST00000304101 NCAPD3P42695 1498 aa33.98■■■■□ 3.03
KCNS3-201ENST00000304101 HMGXB3Q12766 1538 aa33.87■■■■□ 3.01
KCNS3-201ENST00000304101 DNAJC5BQ9UF47 199 aa33.61■■■□□ 2.97
KCNS3-201ENST00000304101 TRIM41Q8WV44 630 aa33.53■■■□□ 2.96
KCNS3-201ENST00000304101 LOC105371045A0A1W2PR82 267 aa33.48■■■□□ 2.95
KCNS3-201ENST00000304101 ABCC8Q09428 1581 aa33.41■■■□□ 2.94
KCNS3-201ENST00000304101 CFTRP13569 1480 aa33.23■■■□□ 2.91
KCNS3-201ENST00000304101 CADPSQ9ULU8 1353 aa33.19■■■□□ 2.9
KCNS3-201ENST00000304101 NESP48681 1621 aa33.15■■■□□ 2.9
KCNS3-201ENST00000304101 WRNQ14191 1432 aaPredicted RBP eCLIP33.08■■■□□ 2.89
KCNS3-201ENST00000304101 FAM9AQ8IZU1 332 aaPredicted RBP33.07■■■□□ 2.88
KCNS3-201ENST00000304101 SYNJ1O43426 1573 aa32.99■■■□□ 2.87
KCNS3-201ENST00000304101 PCGF6Q9BYE7 350 aa32.99■■■□□ 2.87
KCNS3-201ENST00000304101 PRDM2Q13029 1718 aa32.89■■■□□ 2.86
KCNS3-201ENST00000304101 FANCD2Q9BXW9 1451 aa32.86■■■□□ 2.85
KCNS3-201ENST00000304101 LAMC3Q9Y6N6 1575 aa32.82■■■□□ 2.85
KCNS3-201ENST00000304101 EHMT2Q96KQ7 1210 aa32.81■■■□□ 2.84
KCNS3-201ENST00000304101 CUX1P39880 1505 aa32.8■■■□□ 2.84
KCNS3-201ENST00000304101 SOGA1O94964 1423 aa32.76■■■□□ 2.83
KCNS3-201ENST00000304101 HRCP23327 699 aa32.74■■■□□ 2.83
KCNS3-201ENST00000304101 TOP2BQ02880 1626 aa32.74■■■□□ 2.83
KCNS3-201ENST00000304101 RUSC2Q8N2Y8 1516 aa32.69■■■□□ 2.82
KCNS3-201ENST00000304101 BIVM-ERCC5R4GMW8 1640 aa32.66■■■□□ 2.82
KCNS3-201ENST00000304101 TRIM26Q12899 539 aaPredicted RBP32.64■■■□□ 2.82
KCNS3-201ENST00000304101 PDS5BQ9NTI5 1447 aa32.64■■■□□ 2.82
KCNS3-201ENST00000304101 CEP164Q9UPV0 1460 aa32.63■■■□□ 2.81
KCNS3-201ENST00000304101 KIF21AQ7Z4S6 1674 aa32.6■■■□□ 2.81
KCNS3-201ENST00000304101 URB2Q14146 1524 aaKnown RBP32.49■■■□□ 2.79
KCNS3-201ENST00000304101 FGD5Q6ZNL6 1462 aa32.48■■■□□ 2.79
KCNS3-201ENST00000304101 TOPBP1Q92547 1522 aa32.47■■■□□ 2.79
KCNS3-201ENST00000304101 DNMBPQ6XZF7 1577 aa32.44■■■□□ 2.78
KCNS3-201ENST00000304101 EEA1Q15075 1411 aa32.41■■■□□ 2.78
KCNS3-201ENST00000304101 CSRNP3Q8WYN3 585 aa32.39■■■□□ 2.78
KCNS3-201ENST00000304101 ERCC6Q03468 1493 aa32.34■■■□□ 2.77
KCNS3-201ENST00000304101 RAD54L2Q9Y4B4 1467 aa32.34■■■□□ 2.77
KCNS3-201ENST00000304101 POLA1P09884 1462 aaPredicted RBP32.33■■■□□ 2.77
KCNS3-201ENST00000304101 CUX2O14529 1486 aa32.26■■■□□ 2.76
KCNS3-201ENST00000304101 MRC2Q9UBG0 1479 aa32.26■■■□□ 2.75
KCNS3-201ENST00000304101 KIF27Q86VH2 1401 aa32.2■■■□□ 2.75
KCNS3-201ENST00000304101 TNIKQ9UKE5 1360 aa32.14■■■□□ 2.74
KCNS3-201ENST00000304101 CEP162Q5TB80 1403 aa32.09■■■□□ 2.73
KCNS3-201ENST00000304101 UBTFP17480 764 aaKnown RBP32.09■■■□□ 2.73
KCNS3-201ENST00000304101 ABCA10Q8WWZ4 1543 aa32.07■■■□□ 2.72
KCNS3-201ENST00000304101 GOLGA3Q08378 1498 aa32.06■■■□□ 2.72
KCNS3-201ENST00000304101 TDRD9Q8NDG6 1382 aaKnown RBP32.06■■■□□ 2.72
KCNS3-201ENST00000304101 WDR62O43379 1518 aa32.06■■■□□ 2.72
KCNS3-201ENST00000304101 RAPGEF2Q9Y4G8 1499 aa32.04■■■□□ 2.72
KCNS3-201ENST00000304101 THOC2Q8NI27 1593 aaKnown RBP32.04■■■□□ 2.72
KCNS3-201ENST00000304101 IGF1RP08069 1367 aa32■■■□□ 2.71
KCNS3-201ENST00000304101 KIF21BO75037 1637 aa31.97■■■□□ 2.71
KCNS3-201ENST00000304101 TARBP1Q13395 1621 aaKnown RBP31.96■■■□□ 2.71
KCNS3-201ENST00000304101 WDR97A6NE52 1622 aa31.95■■■□□ 2.71
KCNS3-201ENST00000304101 PRXQ9BXM0 1461 aa31.94■■■□□ 2.7
KCNS3-201ENST00000304101 PPARGC1BQ86YN6 1023 aaKnown RBP31.93■■■□□ 2.7
KCNS3-201ENST00000304101 RANGAP1P46060 587 aaPredicted RBP31.89■■■□□ 2.7
KCNS3-201ENST00000304101 AQRO60306 1485 aaKnown RBP eCLIP31.86■■■□□ 2.69
KCNS3-201ENST00000304101 ZNF608Q9ULD9 1512 aaPredicted RBP31.85■■■□□ 2.69
KCNS3-201ENST00000304101 GAPVD1Q14C86 1478 aa31.84■■■□□ 2.69
KCNS3-201ENST00000304101 CARMIL1Q5VZK9 1371 aa31.84■■■□□ 2.69
KCNS3-201ENST00000304101 ABCA5Q8WWZ7 1642 aa31.82■■■□□ 2.68
KCNS3-201ENST00000304101 IFT140Q96RY7 1462 aa31.8■■■□□ 2.68
KCNS3-201ENST00000304101 ZEB1P37275 1124 aaPredicted RBP31.79■■■□□ 2.68
KCNS3-201ENST00000304101 ERICH3Q5RHP9 1530 aa31.76■■■□□ 2.68
KCNS3-201ENST00000304101 CLIP1P30622 1438 aa31.62■■■□□ 2.65
KCNS3-201ENST00000304101 PBRM1Q86U86 1689 aa31.62■■■□□ 2.65
KCNS3-201ENST00000304101 EIF4G3O43432 1585 aaKnown RBP31.61■■■□□ 2.65
KCNS3-201ENST00000304101 CUL7Q14999 1698 aa31.6■■■□□ 2.65
KCNS3-201ENST00000304101 GRIN2BQ13224 1484 aa31.57■■■□□ 2.64
KCNS3-201ENST00000304101 SNAPC4Q5SXM2 1469 aa31.49■■■□□ 2.63
KCNS3-201ENST00000304101 TTBK1Q5TCY1 1321 aaPredicted RBP31.48■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms