RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 ZNF608Q9ULD9 1512 aaPredicted RBP32.92■■■□□ 2.86
GFRA3-201ENST00000274721 GRIN2BQ13224 1484 aa32.92■■■□□ 2.86
GFRA3-201ENST00000274721 FHAD1B1AJZ9 1412 aa32.89■■■□□ 2.86
GFRA3-201ENST00000274721 EFCAB5A4FU69 1503 aa32.84■■■□□ 2.85
GFRA3-201ENST00000274721 ADAMTS12P58397 1594 aa32.83■■■□□ 2.85
GFRA3-201ENST00000274721 EIF4G3O43432 1585 aaKnown RBP32.75■■■□□ 2.83
GFRA3-201ENST00000274721 KANK4Q5T7N3 995 aaPredicted RBP32.72■■■□□ 2.83
GFRA3-201ENST00000274721 MAP3K1Q13233 1512 aa32.7■■■□□ 2.82
GFRA3-201ENST00000274721 FHOD3Q2V2M9 1422 aa32.69■■■□□ 2.82
GFRA3-201ENST00000274721 P3H3Q8IVL6 736 aa32.69■■■□□ 2.82
GFRA3-201ENST00000274721 SAMD9Q5K651 1589 aa32.67■■■□□ 2.82
GFRA3-201ENST00000274721 SNAPC4Q5SXM2 1469 aa32.64■■■□□ 2.82
GFRA3-201ENST00000274721 MAGI1Q96QZ7 1491 aaPredicted RBP32.59■■■□□ 2.81
GFRA3-201ENST00000274721 TIAM1Q13009 1591 aa32.59■■■□□ 2.81
GFRA3-201ENST00000274721 PCF11O94913 1555 aaKnown RBP32.58■■■□□ 2.81
GFRA3-201ENST00000274721 FMN1Q68DA7 1419 aa32.57■■■□□ 2.8
GFRA3-201ENST00000274721 CASKIN1Q8WXD9 1431 aa32.57■■■□□ 2.8
GFRA3-201ENST00000274721 IQGAP2Q13576 1575 aa32.56■■■□□ 2.8
GFRA3-201ENST00000274721 FYCO1Q9BQS8 1478 aa32.55■■■□□ 2.8
GFRA3-201ENST00000274721 ZEB1P37275 1124 aaPredicted RBP32.53■■■□□ 2.8
GFRA3-201ENST00000274721 GRIN2AQ12879 1464 aa32.53■■■□□ 2.8
GFRA3-201ENST00000274721 SYNJ2O15056 1496 aa32.48■■■□□ 2.79
GFRA3-201ENST00000274721 KIAA0586Q9BVV6 1533 aa32.48■■■□□ 2.79
GFRA3-201ENST00000274721 LRRC9Q6ZRR7 1453 aa32.47■■■□□ 2.79
GFRA3-201ENST00000274721 CFAP43Q8NDM7 1665 aa32.46■■■□□ 2.79
GFRA3-201ENST00000274721 UGGT2Q9NYU1 1516 aa32.44■■■□□ 2.78
GFRA3-201ENST00000274721 RRBP1Q9P2E9 1410 aaKnown RBP32.43■■■□□ 2.78
GFRA3-201ENST00000274721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.39■■■□□ 2.78
GFRA3-201ENST00000274721 CHMP7Q8WUX9 453 aaPredicted RBP32.39■■■□□ 2.78
GFRA3-201ENST00000274721 ATP1B4Q9UN42 357 aaPredicted RBP32.36■■■□□ 2.77
GFRA3-201ENST00000274721 HNRNPUL2Q1KMD3 747 aaKnown RBP32.35■■■□□ 2.77
GFRA3-201ENST00000274721 CEP170Q5SW79 1584 aa32.3■■■□□ 2.76
GFRA3-201ENST00000274721 NUP160Q12769 1436 aa32.3■■■□□ 2.76
GFRA3-201ENST00000274721 CCER1Q8TC90 406 aaPredicted RBP32.29■■■□□ 2.76
GFRA3-201ENST00000274721 CCNB3Q8WWL7 1395 aa32.28■■■□□ 2.76
GFRA3-201ENST00000274721 DISP1Q96F81 1524 aa32.27■■■□□ 2.76
GFRA3-201ENST00000274721 FBLN2P98095 1184 aa32.25■■■□□ 2.75
GFRA3-201ENST00000274721 LRRIQ1Q96JM4 1722 aa32.24■■■□□ 2.75
GFRA3-201ENST00000274721 KIAA0556O60303 1618 aa32.23■■■□□ 2.75
GFRA3-201ENST00000274721 PHLDB1Q86UU1 1377 aa32.22■■■□□ 2.75
GFRA3-201ENST00000274721 HECW1Q76N89 1606 aa32.14■■■□□ 2.74
GFRA3-201ENST00000274721 CCDC18Q5T9S5 1454 aa32.14■■■□□ 2.74
GFRA3-201ENST00000274721 MTUS2Q5JR59 1369 aa32.11■■■□□ 2.73
GFRA3-201ENST00000274721 JPH4Q96JJ6 628 aa32.1■■■□□ 2.73
GFRA3-201ENST00000274721 EPRSP07814 1512 aaKnown RBP32.07■■■□□ 2.73
GFRA3-201ENST00000274721 EHBP1L1Q8N3D4 1523 aa32.03■■■□□ 2.72
GFRA3-201ENST00000274721 CARMIL2Q6F5E8 1435 aa32.02■■■□□ 2.72
GFRA3-201ENST00000274721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.01■■■□□ 2.71
GFRA3-201ENST00000274721 MAGI3Q5TCQ9 1506 aa32.01■■■□□ 2.71
GFRA3-201ENST00000274721 NCOA2Q15596 1464 aa31.98■■■□□ 2.71
GFRA3-201ENST00000274721 RAPGEF6Q8TEU7 1601 aa31.95■■■□□ 2.71
GFRA3-201ENST00000274721 CHD1O14646 1710 aa31.95■■■□□ 2.71
GFRA3-201ENST00000274721 SUPT6HQ7KZ85 1726 aaKnown RBP31.95■■■□□ 2.71
GFRA3-201ENST00000274721 ARHGEF11O15085 1522 aa31.95■■■□□ 2.7
GFRA3-201ENST00000274721 CDK13Q14004 1512 aaKnown RBP31.94■■■□□ 2.7
GFRA3-201ENST00000274721 NUP153P49790 1475 aaKnown RBP31.94■■■□□ 2.7
GFRA3-201ENST00000274721 FGD6Q6ZV73 1430 aa31.94■■■□□ 2.7
GFRA3-201ENST00000274721 FAM50AQ14320 339 aaKnown RBP31.9■■■□□ 2.7
GFRA3-201ENST00000274721 ITGAEP38570 1179 aa31.89■■■□□ 2.7
GFRA3-201ENST00000274721 MYOM3Q5VTT5 1437 aa31.89■■■□□ 2.69
GFRA3-201ENST00000274721 PLB1Q6P1J6 1458 aa31.84■■■□□ 2.69
GFRA3-201ENST00000274721 PRG4Q92954 1404 aaPredicted RBP31.81■■■□□ 2.68
GFRA3-201ENST00000274721 ARID3CA6NKF2 412 aa31.8■■■□□ 2.68
GFRA3-201ENST00000274721 DHX57Q6P158 1386 aaKnown RBP31.8■■■□□ 2.68
GFRA3-201ENST00000274721 SHROOM2Q13796 1616 aa31.77■■■□□ 2.68
GFRA3-201ENST00000274721 CLSPNQ9HAW4 1339 aa31.76■■■□□ 2.67
GFRA3-201ENST00000274721 ABCA8O94911 1581 aa31.75■■■□□ 2.67
GFRA3-201ENST00000274721 CDK11AQ9UQ88 783 aaPredicted RBP31.75■■■□□ 2.67
GFRA3-201ENST00000274721 SETD5Q9C0A6 1442 aa31.74■■■□□ 2.67
GFRA3-201ENST00000274721 RAB3GAP2Q9H2M9 1393 aa31.73■■■□□ 2.67
GFRA3-201ENST00000274721 PTPN23Q9H3S7 1636 aa31.7■■■□□ 2.66
GFRA3-201ENST00000274721 TCOF1Q13428 1488 aaKnown RBP31.69■■■□□ 2.66
GFRA3-201ENST00000274721 MIA2Q96PC5 1412 aa31.69■■■□□ 2.66
GFRA3-201ENST00000274721 PTPRGP23470 1445 aa31.68■■■□□ 2.66
GFRA3-201ENST00000274721 TROQ12816 1431 aaPredicted RBP31.65■■■□□ 2.66
GFRA3-201ENST00000274721 PTPRKQ15262 1439 aa31.64■■■□□ 2.66
GFRA3-201ENST00000274721 CLASP1Q7Z460 1538 aa31.63■■■□□ 2.65
GFRA3-201ENST00000274721 ATP10BO94823 1461 aa31.6■■■□□ 2.65
GFRA3-201ENST00000274721 ADCY10Q96PN6 1610 aa31.54■■■□□ 2.64
GFRA3-201ENST00000274721 HFM1A2PYH4 1435 aa31.54■■■□□ 2.64
GFRA3-201ENST00000274721 ERCC6L2Q5T890 1561 aa31.53■■■□□ 2.64
GFRA3-201ENST00000274721 UACAQ9BZF9 1416 aa31.5■■■□□ 2.63
GFRA3-201ENST00000274721 PLEKHD1A6NEE1 506 aa31.5■■■□□ 2.63
GFRA3-201ENST00000274721 KIF14Q15058 1648 aa31.46■■■□□ 2.63
GFRA3-201ENST00000274721 NAIPQ13075 1403 aa31.45■■■□□ 2.63
GFRA3-201ENST00000274721 GPATCH8Q9UKJ3 1502 aaKnown RBP31.44■■■□□ 2.62
GFRA3-201ENST00000274721 MAPKBP1O60336 1514 aa31.43■■■□□ 2.62
GFRA3-201ENST00000274721 AKNAQ7Z591 1439 aa31.4■■■□□ 2.62
GFRA3-201ENST00000274721 ITSN2Q9NZM3 1697 aa31.39■■■□□ 2.62
GFRA3-201ENST00000274721 ABCC10Q5T3U5 1492 aa31.38■■■□□ 2.61
GFRA3-201ENST00000274721 ABCC2Q92887 1545 aa31.37■■■□□ 2.61
GFRA3-201ENST00000274721 ZNF644Q9H582 1327 aaPredicted RBP31.37■■■□□ 2.61
GFRA3-201ENST00000274721 CFDP1Q9UEE9 299 aaPredicted RBP31.36■■■□□ 2.61
GFRA3-201ENST00000274721 DAPK1P53355 1430 aa31.34■■■□□ 2.61
GFRA3-201ENST00000274721 DNMT1P26358 1616 aaKnown RBP31.34■■■□□ 2.61
GFRA3-201ENST00000274721 ABCC5O15440 1437 aa31.33■■■□□ 2.61
GFRA3-201ENST00000274721 CHIC2Q9UKJ5 165 aa31.32■■■□□ 2.6
GFRA3-201ENST00000274721 CAMSAP2Q08AD1 1489 aa31.29■■■□□ 2.6
GFRA3-201ENST00000274721 ROCK1Q13464 1354 aa31.29■■■□□ 2.6
GFRA3-201ENST00000274721 GCC2Q8IWJ2 1684 aa31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms