RNA–Protein interactions for RNA: ENST00000264389.6

COPS4-201, Transcript of COP9 signalosome subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS4, Length 1,744 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-201ENST00000264389 AQRO60306 1485 aaKnown RBP eCLIP13.18□□□□□ -0.3
COPS4-201ENST00000264389 FHAD1B1AJZ9 1412 aa13.13□□□□□ -0.31
COPS4-201ENST00000264389 SNAPC4Q5SXM2 1469 aa13.12□□□□□ -0.31
COPS4-201ENST00000264389 MAGI1Q96QZ7 1491 aaPredicted RBP13.1□□□□□ -0.31
COPS4-201ENST00000264389 RANGAP1P46060 587 aaPredicted RBP13.1□□□□□ -0.31
COPS4-201ENST00000264389 VPS8Q8N3P4 1428 aa13.09□□□□□ -0.31
COPS4-201ENST00000264389 ARAP1Q96P48 1450 aa13.09□□□□□ -0.31
COPS4-201ENST00000264389 EFCAB5A4FU69 1503 aa13.08□□□□□ -0.32
COPS4-201ENST00000264389 ARHGAP35Q9NRY4 1499 aa13.08□□□□□ -0.32
COPS4-201ENST00000264389 IQGAP2Q13576 1575 aa13.06□□□□□ -0.32
COPS4-201ENST00000264389 SAMD9Q5K651 1589 aa13.04□□□□□ -0.32
COPS4-201ENST00000264389 SYNJ2O15056 1496 aa13.04□□□□□ -0.32
COPS4-201ENST00000264389 GRIN2AQ12879 1464 aa13.04□□□□□ -0.32
COPS4-201ENST00000264389 CHD1O14646 1710 aa13.02□□□□□ -0.32
COPS4-201ENST00000264389 CEP170Q5SW79 1584 aa12.99□□□□□ -0.33
COPS4-201ENST00000264389 PCF11O94913 1555 aaKnown RBP12.98□□□□□ -0.33
COPS4-201ENST00000264389 PIAS4Q8N2W9 510 aaPredicted RBP12.96□□□□□ -0.33
COPS4-201ENST00000264389 CFAP43Q8NDM7 1665 aa12.96□□□□□ -0.34
COPS4-201ENST00000264389 FHOD3Q2V2M9 1422 aa12.96□□□□□ -0.34
COPS4-201ENST00000264389 KIAA0586Q9BVV6 1533 aa12.95□□□□□ -0.34
COPS4-201ENST00000264389 UGGT2Q9NYU1 1516 aa12.95□□□□□ -0.34
COPS4-201ENST00000264389 TRIM26Q12899 539 aaPredicted RBP12.93□□□□□ -0.34
COPS4-201ENST00000264389 CHMP7Q8WUX9 453 aaPredicted RBP12.93□□□□□ -0.34
COPS4-201ENST00000264389 KIAA0556O60303 1618 aa12.93□□□□□ -0.34
COPS4-201ENST00000264389 NUP160Q12769 1436 aa12.93□□□□□ -0.34
COPS4-201ENST00000264389 PPARGC1BQ86YN6 1023 aaKnown RBP12.93□□□□□ -0.34
COPS4-201ENST00000264389 APLP2Q06481 763 aa12.92□□□□□ -0.34
COPS4-201ENST00000264389 PCGF6Q9BYE7 350 aa12.92□□□□□ -0.34
COPS4-201ENST00000264389 FYCO1Q9BQS8 1478 aa12.91□□□□□ -0.34
COPS4-201ENST00000264389 FMN1Q68DA7 1419 aa12.91□□□□□ -0.34
COPS4-201ENST00000264389 TIAM1Q13009 1591 aa12.91□□□□□ -0.34
COPS4-201ENST00000264389 FBLN2P98095 1184 aa12.91□□□□□ -0.34
COPS4-201ENST00000264389 LRRIQ1Q96JM4 1722 aa12.89□□□□□ -0.35
COPS4-201ENST00000264389 P3H3Q8IVL6 736 aa12.89□□□□□ -0.35
COPS4-201ENST00000264389 TTBK1Q5TCY1 1321 aaPredicted RBP12.87□□□□□ -0.35
COPS4-201ENST00000264389 MAP3K1Q13233 1512 aa12.87□□□□□ -0.35
COPS4-201ENST00000264389 HECW1Q76N89 1606 aa12.87□□□□□ -0.35
COPS4-201ENST00000264389 CASKIN1Q8WXD9 1431 aa12.86□□□□□ -0.35
COPS4-201ENST00000264389 DISP1Q96F81 1524 aa12.86□□□□□ -0.35
COPS4-201ENST00000264389 SHROOM2Q13796 1616 aa12.83□□□□□ -0.36
COPS4-201ENST00000264389 RAPGEF6Q8TEU7 1601 aa12.81□□□□□ -0.36
COPS4-201ENST00000264389 CARMIL2Q6F5E8 1435 aa12.8□□□□□ -0.36
COPS4-201ENST00000264389 CLASP1Q7Z460 1538 aa12.79□□□□□ -0.36
COPS4-201ENST00000264389 CCDC18Q5T9S5 1454 aa12.78□□□□□ -0.36
COPS4-201ENST00000264389 LRRC9Q6ZRR7 1453 aa12.78□□□□□ -0.36
COPS4-201ENST00000264389 ATP1B4Q9UN42 357 aaPredicted RBP12.77□□□□□ -0.36
COPS4-201ENST00000264389 KANK4Q5T7N3 995 aaPredicted RBP12.76□□□□□ -0.37
COPS4-201ENST00000264389 EHBP1L1Q8N3D4 1523 aa12.75□□□□□ -0.37
COPS4-201ENST00000264389 SUPT6HQ7KZ85 1726 aaKnown RBP12.75□□□□□ -0.37
COPS4-201ENST00000264389 JPH4Q96JJ6 628 aa12.74□□□□□ -0.37
COPS4-201ENST00000264389 PRG4Q92954 1404 aaPredicted RBP12.73□□□□□ -0.37
COPS4-201ENST00000264389 EPRSP07814 1512 aaKnown RBP12.73□□□□□ -0.37
COPS4-201ENST00000264389 CDK13Q14004 1512 aaKnown RBP12.72□□□□□ -0.37
COPS4-201ENST00000264389 ABCA8O94911 1581 aa12.7□□□□□ -0.38
COPS4-201ENST00000264389 NUP153P49790 1475 aaKnown RBP12.7□□□□□ -0.38
COPS4-201ENST00000264389 PLB1Q6P1J6 1458 aa12.69□□□□□ -0.38
COPS4-201ENST00000264389 MAGI3Q5TCQ9 1506 aa12.69□□□□□ -0.38
COPS4-201ENST00000264389 MTUS2Q5JR59 1369 aa12.69□□□□□ -0.38
COPS4-201ENST00000264389 ERCC6L2Q5T890 1561 aa12.68□□□□□ -0.38
COPS4-201ENST00000264389 RRBP1Q9P2E9 1410 aaKnown RBP12.68□□□□□ -0.38
COPS4-201ENST00000264389 PHLDB1Q86UU1 1377 aa12.64□□□□□ -0.39
COPS4-201ENST00000264389 NCOA2Q15596 1464 aa12.64□□□□□ -0.39
COPS4-201ENST00000264389 ADCY10Q96PN6 1610 aa12.64□□□□□ -0.39
COPS4-201ENST00000264389 CCNB3Q8WWL7 1395 aa12.63□□□□□ -0.39
COPS4-201ENST00000264389 PTPRGP23470 1445 aa12.63□□□□□ -0.39
COPS4-201ENST00000264389 ARHGEF11O15085 1522 aa12.63□□□□□ -0.39
COPS4-201ENST00000264389 ITSN2Q9NZM3 1697 aa12.61□□□□□ -0.39
COPS4-201ENST00000264389 ABCC2Q92887 1545 aa12.61□□□□□ -0.39
COPS4-201ENST00000264389 ARID3CA6NKF2 412 aa12.6□□□□□ -0.39
COPS4-201ENST00000264389 MYOM3Q5VTT5 1437 aa12.59□□□□□ -0.39
COPS4-201ENST00000264389 UACAQ9BZF9 1416 aa12.59□□□□□ -0.39
COPS4-201ENST00000264389 KIF14Q15058 1648 aa12.58□□□□□ -0.39
COPS4-201ENST00000264389 PTPN23Q9H3S7 1636 aa12.58□□□□□ -0.39
COPS4-201ENST00000264389 FGD6Q6ZV73 1430 aa12.58□□□□□ -0.4
COPS4-201ENST00000264389 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.57□□□□□ -0.4
COPS4-201ENST00000264389 HNRNPUL2Q1KMD3 747 aaKnown RBP12.57□□□□□ -0.4
COPS4-201ENST00000264389 TROQ12816 1431 aaPredicted RBP12.57□□□□□ -0.4
COPS4-201ENST00000264389 ZCCHC11Q5TAX3 1644 aaKnown RBP12.57□□□□□ -0.4
COPS4-201ENST00000264389 CDK11AQ9UQ88 783 aaPredicted RBP12.57□□□□□ -0.4
COPS4-201ENST00000264389 ATP10BO94823 1461 aa12.55□□□□□ -0.4
COPS4-201ENST00000264389 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
COPS4-201ENST00000264389 CDC42BPAQ5VT25 1732 aa12.54□□□□□ -0.4
COPS4-201ENST00000264389 UHRF1BP1LA0JNW5 1464 aa12.54□□□□□ -0.4
COPS4-201ENST00000264389 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.53□□□□□ -0.4
COPS4-201ENST00000264389 HRCP23327 699 aa12.53□□□□□ -0.4
COPS4-201ENST00000264389 FAM50AQ14320 339 aaKnown RBP12.51□□□□□ -0.41
COPS4-201ENST00000264389 TCOF1Q13428 1488 aaKnown RBP12.51□□□□□ -0.41
COPS4-201ENST00000264389 MIA2Q96PC5 1412 aa12.5□□□□□ -0.41
COPS4-201ENST00000264389 KDM5BQ9UGL1 1544 aa12.49□□□□□ -0.41
COPS4-201ENST00000264389 MYO5CQ9NQX4 1742 aa12.49□□□□□ -0.41
COPS4-201ENST00000264389 PREX2Q70Z35 1606 aa12.48□□□□□ -0.41
COPS4-201ENST00000264389 ITGAEP38570 1179 aa12.48□□□□□ -0.41
COPS4-201ENST00000264389 PLEKHD1A6NEE1 506 aa12.47□□□□□ -0.41
COPS4-201ENST00000264389 MSH5O43196 834 aa12.47□□□□□ -0.41
COPS4-201ENST00000264389 CROCC2H7BZ55 1655 aa12.47□□□□□ -0.41
COPS4-201ENST00000264389 ABCC10Q5T3U5 1492 aa12.47□□□□□ -0.41
COPS4-201ENST00000264389 TTC37Q6PGP7 1564 aa12.46□□□□□ -0.41
COPS4-201ENST00000264389 DNMT1P26358 1616 aaKnown RBP12.46□□□□□ -0.41
COPS4-201ENST00000264389 GCC2Q8IWJ2 1684 aa12.46□□□□□ -0.41
COPS4-201ENST00000264389 CDC42BPBQ9Y5S2 1711 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms