RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 EIF4G3O43432 1585 aaKnown RBP20.81■□□□□ 0.92
NUP85-201ENST00000245544 ADAMTS12P58397 1594 aa20.8■□□□□ 0.92
NUP85-201ENST00000245544 FHAD1B1AJZ9 1412 aa20.8■□□□□ 0.92
NUP85-201ENST00000245544 P3H3Q8IVL6 736 aa20.79■□□□□ 0.92
NUP85-201ENST00000245544 APLP2Q06481 763 aa20.77■□□□□ 0.92
NUP85-201ENST00000245544 SNAPC4Q5SXM2 1469 aa20.74■□□□□ 0.91
NUP85-201ENST00000245544 HRCP23327 699 aa20.72■□□□□ 0.91
NUP85-201ENST00000245544 FHOD3Q2V2M9 1422 aa20.72■□□□□ 0.91
NUP85-201ENST00000245544 KANK4Q5T7N3 995 aaPredicted RBP20.7■□□□□ 0.9
NUP85-201ENST00000245544 EFCAB5A4FU69 1503 aa20.69■□□□□ 0.9
NUP85-201ENST00000245544 SAMD9Q5K651 1589 aa20.63■□□□□ 0.89
NUP85-201ENST00000245544 MAGI1Q96QZ7 1491 aaPredicted RBP20.62■□□□□ 0.89
NUP85-201ENST00000245544 PCF11O94913 1555 aaKnown RBP20.61■□□□□ 0.89
NUP85-201ENST00000245544 GRIN2AQ12879 1464 aa20.61■□□□□ 0.89
NUP85-201ENST00000245544 IQGAP2Q13576 1575 aa20.61■□□□□ 0.89
NUP85-201ENST00000245544 SYNJ2O15056 1496 aa20.57■□□□□ 0.88
NUP85-201ENST00000245544 CHMP7Q8WUX9 453 aaPredicted RBP20.57■□□□□ 0.88
NUP85-201ENST00000245544 ATP1B4Q9UN42 357 aaPredicted RBP20.57■□□□□ 0.88
NUP85-201ENST00000245544 FBLN2P98095 1184 aa20.56■□□□□ 0.88
NUP85-201ENST00000245544 TIAM1Q13009 1591 aa20.56■□□□□ 0.88
NUP85-201ENST00000245544 CASKIN1Q8WXD9 1431 aa20.53■□□□□ 0.88
NUP85-201ENST00000245544 KIAA0586Q9BVV6 1533 aa20.53■□□□□ 0.88
NUP85-201ENST00000245544 FMN1Q68DA7 1419 aa20.52■□□□□ 0.88
NUP85-201ENST00000245544 FYCO1Q9BQS8 1478 aa20.52■□□□□ 0.88
NUP85-201ENST00000245544 MAP3K1Q13233 1512 aa20.52■□□□□ 0.87
NUP85-201ENST00000245544 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
NUP85-201ENST00000245544 UGGT2Q9NYU1 1516 aa20.49■□□□□ 0.87
NUP85-201ENST00000245544 CFAP43Q8NDM7 1665 aa20.48■□□□□ 0.87
NUP85-201ENST00000245544 LRRC9Q6ZRR7 1453 aa20.48■□□□□ 0.87
NUP85-201ENST00000245544 HNRNPUL2Q1KMD3 747 aaKnown RBP20.45■□□□□ 0.86
NUP85-201ENST00000245544 DISP1Q96F81 1524 aa20.44■□□□□ 0.86
NUP85-201ENST00000245544 LRRIQ1Q96JM4 1722 aa20.44■□□□□ 0.86
NUP85-201ENST00000245544 NUP160Q12769 1436 aa20.44■□□□□ 0.86
NUP85-201ENST00000245544 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.44■□□□□ 0.86
NUP85-201ENST00000245544 KIAA0556O60303 1618 aa20.4■□□□□ 0.86
NUP85-201ENST00000245544 RRBP1Q9P2E9 1410 aaKnown RBP20.38■□□□□ 0.85
NUP85-201ENST00000245544 PHLDB1Q86UU1 1377 aa20.36■□□□□ 0.85
NUP85-201ENST00000245544 JPH4Q96JJ6 628 aa20.35■□□□□ 0.85
NUP85-201ENST00000245544 CHD1O14646 1710 aa20.34■□□□□ 0.85
NUP85-201ENST00000245544 CCNB3Q8WWL7 1395 aa20.32■□□□□ 0.84
NUP85-201ENST00000245544 CCER1Q8TC90 406 aaPredicted RBP20.3■□□□□ 0.84
NUP85-201ENST00000245544 HECW1Q76N89 1606 aa20.3■□□□□ 0.84
NUP85-201ENST00000245544 ARID3CA6NKF2 412 aa20.3■□□□□ 0.84
NUP85-201ENST00000245544 MTUS2Q5JR59 1369 aa20.29■□□□□ 0.84
NUP85-201ENST00000245544 EPRSP07814 1512 aaKnown RBP20.27■□□□□ 0.84
NUP85-201ENST00000245544 MAGI3Q5TCQ9 1506 aa20.27■□□□□ 0.84
NUP85-201ENST00000245544 CDK13Q14004 1512 aaKnown RBP20.27■□□□□ 0.83
NUP85-201ENST00000245544 ZEB1P37275 1124 aaPredicted RBP20.26■□□□□ 0.83
NUP85-201ENST00000245544 CCDC18Q5T9S5 1454 aa20.25■□□□□ 0.83
NUP85-201ENST00000245544 CARMIL2Q6F5E8 1435 aa20.24■□□□□ 0.83
NUP85-201ENST00000245544 ITGAEP38570 1179 aa20.23■□□□□ 0.83
NUP85-201ENST00000245544 RAPGEF6Q8TEU7 1601 aa20.22■□□□□ 0.83
NUP85-201ENST00000245544 NUP153P49790 1475 aaKnown RBP20.22■□□□□ 0.83
NUP85-201ENST00000245544 PLB1Q6P1J6 1458 aa20.21■□□□□ 0.83
NUP85-201ENST00000245544 EHBP1L1Q8N3D4 1523 aa20.2■□□□□ 0.82
NUP85-201ENST00000245544 PRG4Q92954 1404 aaPredicted RBP20.2■□□□□ 0.82
NUP85-201ENST00000245544 NCOA2Q15596 1464 aa20.19■□□□□ 0.82
NUP85-201ENST00000245544 FAM50AQ14320 339 aaKnown RBP20.19■□□□□ 0.82
NUP85-201ENST00000245544 SUPT6HQ7KZ85 1726 aaKnown RBP20.17■□□□□ 0.82
NUP85-201ENST00000245544 FGD6Q6ZV73 1430 aa20.14■□□□□ 0.81
NUP85-201ENST00000245544 ARHGEF11O15085 1522 aa20.13■□□□□ 0.81
NUP85-201ENST00000245544 SHROOM2Q13796 1616 aa20.12■□□□□ 0.81
NUP85-201ENST00000245544 MYOM3Q5VTT5 1437 aa20.1■□□□□ 0.81
NUP85-201ENST00000245544 ERCC6L2Q5T890 1561 aa20.1■□□□□ 0.81
NUP85-201ENST00000245544 ABCA8O94911 1581 aa20.09■□□□□ 0.81
NUP85-201ENST00000245544 PTPRGP23470 1445 aa20.07■□□□□ 0.8
NUP85-201ENST00000245544 CLASP1Q7Z460 1538 aa20.07■□□□□ 0.8
NUP85-201ENST00000245544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.06■□□□□ 0.8
NUP85-201ENST00000245544 CDK11AQ9UQ88 783 aaPredicted RBP20.02■□□□□ 0.79
NUP85-201ENST00000245544 PTPN23Q9H3S7 1636 aa20.01■□□□□ 0.79
NUP85-201ENST00000245544 ATP10BO94823 1461 aa20.01■□□□□ 0.79
NUP85-201ENST00000245544 PTPRKQ15262 1439 aa20.01■□□□□ 0.79
NUP85-201ENST00000245544 RAB3GAP2Q9H2M9 1393 aa20.01■□□□□ 0.79
NUP85-201ENST00000245544 DHX57Q6P158 1386 aaKnown RBP20■□□□□ 0.79
NUP85-201ENST00000245544 TROQ12816 1431 aaPredicted RBP19.99■□□□□ 0.79
NUP85-201ENST00000245544 SETD5Q9C0A6 1442 aa19.97■□□□□ 0.79
NUP85-201ENST00000245544 KIF14Q15058 1648 aa19.96■□□□□ 0.79
NUP85-201ENST00000245544 TCOF1Q13428 1488 aaKnown RBP19.95■□□□□ 0.78
NUP85-201ENST00000245544 UACAQ9BZF9 1416 aa19.95■□□□□ 0.78
NUP85-201ENST00000245544 MIA2Q96PC5 1412 aa19.93■□□□□ 0.78
NUP85-201ENST00000245544 PLEKHD1A6NEE1 506 aa19.92■□□□□ 0.78
NUP85-201ENST00000245544 ADCY10Q96PN6 1610 aa19.91■□□□□ 0.78
NUP85-201ENST00000245544 ZNF644Q9H582 1327 aaPredicted RBP19.9■□□□□ 0.78
NUP85-201ENST00000245544 GPATCH8Q9UKJ3 1502 aaKnown RBP19.88■□□□□ 0.77
NUP85-201ENST00000245544 CHIC2Q9UKJ5 165 aa19.87■□□□□ 0.77
NUP85-201ENST00000245544 ABCC2Q92887 1545 aa19.86■□□□□ 0.77
NUP85-201ENST00000245544 HFM1A2PYH4 1435 aa19.84■□□□□ 0.77
NUP85-201ENST00000245544 ABCC10Q5T3U5 1492 aa19.84■□□□□ 0.77
NUP85-201ENST00000245544 NAIPQ13075 1403 aa19.83■□□□□ 0.77
NUP85-201ENST00000245544 CFDP1Q9UEE9 299 aaPredicted RBP19.83■□□□□ 0.77
NUP85-201ENST00000245544 CLSPNQ9HAW4 1339 aa19.83■□□□□ 0.76
NUP85-201ENST00000245544 OSCARQ8IYS5 282 aa19.82■□□□□ 0.76
NUP85-201ENST00000245544 ITSN2Q9NZM3 1697 aa19.81■□□□□ 0.76
NUP85-201ENST00000245544 RRP7BPQ9NSQ0 103 aa19.81■□□□□ 0.76
NUP85-201ENST00000245544 CDC42BPAQ5VT25 1732 aa19.81■□□□□ 0.76
NUP85-201ENST00000245544 MAPKBP1O60336 1514 aa19.8■□□□□ 0.76
NUP85-201ENST00000245544 ZNF777Q9ULD5 760 aaPredicted RBP19.79■□□□□ 0.76
NUP85-201ENST00000245544 CAMSAP2Q08AD1 1489 aa19.79■□□□□ 0.76
NUP85-201ENST00000245544 DAPK1P53355 1430 aa19.79■□□□□ 0.76
NUP85-201ENST00000245544 ABCC5O15440 1437 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms