RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 MAP3K1Q13233 1512 aa45.2■■■■■ 4.83
PABPN1-201ENST00000216727 KANK4Q5T7N3 995 aaPredicted RBP45.17■■■■■ 4.82
PABPN1-201ENST00000216727 ERCC6Q03468 1493 aa45.16■■■■■ 4.82
PABPN1-201ENST00000216727 AQRO60306 1485 aaKnown RBP eCLIP45.14■■■■■ 4.826e-8■■■■□ 24.8
PABPN1-201ENST00000216727 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP45.13■■■■■ 4.82
PABPN1-201ENST00000216727 GRIN2BQ13224 1484 aa45.1■■■■■ 4.81
PABPN1-201ENST00000216727 TIAM1Q13009 1591 aa45.06■■■■■ 4.8
PABPN1-201ENST00000216727 THOC2Q8NI27 1593 aaKnown RBP45.06■■■■■ 4.8
PABPN1-201ENST00000216727 CCER1Q8TC90 406 aaPredicted RBP45.06■■■■■ 4.8
PABPN1-201ENST00000216727 ADAMTS12P58397 1594 aa45.05■■■■■ 4.8
PABPN1-201ENST00000216727 FHOD3Q2V2M9 1422 aa45.02■■■■■ 4.8
PABPN1-201ENST00000216727 SAMD9Q5K651 1589 aa44.99■■■■■ 4.79
PABPN1-201ENST00000216727 ZNF608Q9ULD9 1512 aaPredicted RBP44.98■■■■■ 4.79
PABPN1-201ENST00000216727 PCF11O94913 1555 aaKnown RBP44.98■■■■■ 4.79
PABPN1-201ENST00000216727 P3H3Q8IVL6 736 aa44.97■■■■■ 4.79
PABPN1-201ENST00000216727 FYCO1Q9BQS8 1478 aa44.93■■■■■ 4.78
PABPN1-201ENST00000216727 RRBP1Q9P2E9 1410 aaKnown RBP44.92■■■■■ 4.78
PABPN1-201ENST00000216727 CASKIN1Q8WXD9 1431 aa44.9■■■■■ 4.78
PABPN1-201ENST00000216727 FMN1Q68DA7 1419 aa44.9■■■■■ 4.78
PABPN1-201ENST00000216727 CFAP43Q8NDM7 1665 aa44.89■■■■■ 4.78
PABPN1-201ENST00000216727 HNRNPUL2Q1KMD3 747 aaKnown RBP44.89■■■■■ 4.78
PABPN1-201ENST00000216727 LRRC9Q6ZRR7 1453 aa44.86■■■■■ 4.77
PABPN1-201ENST00000216727 EIF4G3O43432 1585 aaKnown RBP44.82■■■■■ 4.77
PABPN1-201ENST00000216727 SNAPC4Q5SXM2 1469 aa44.75■■■■■ 4.75
PABPN1-201ENST00000216727 IQGAP2Q13576 1575 aa44.75■■■■■ 4.75
PABPN1-201ENST00000216727 CCNB3Q8WWL7 1395 aa44.7■■■■■ 4.75
PABPN1-201ENST00000216727 MAGI1Q96QZ7 1491 aaPredicted RBP44.62■■■■■ 4.73
PABPN1-201ENST00000216727 ATP1B4Q9UN42 357 aaPredicted RBP44.6■■■■■ 4.73
PABPN1-201ENST00000216727 GRIN2AQ12879 1464 aa44.57■■■■■ 4.73
PABPN1-201ENST00000216727 UGGT2Q9NYU1 1516 aa44.56■■■■■ 4.72
PABPN1-201ENST00000216727 KIAA0586Q9BVV6 1533 aa44.54■■■■■ 4.72
PABPN1-201ENST00000216727 PHLDB1Q86UU1 1377 aa44.51■■■■■ 4.72
PABPN1-201ENST00000216727 SYNJ2O15056 1496 aa44.45■■■■■ 4.71
PABPN1-201ENST00000216727 LRRIQ1Q96JM4 1722 aa44.43■■■■■ 4.7
PABPN1-201ENST00000216727 CCDC18Q5T9S5 1454 aa44.32■■■■■ 4.69
PABPN1-201ENST00000216727 HECW1Q76N89 1606 aa44.31■■■■■ 4.68
PABPN1-201ENST00000216727 CHMP7Q8WUX9 453 aaPredicted RBP44.31■■■■■ 4.68
PABPN1-201ENST00000216727 MTUS2Q5JR59 1369 aa44.3■■■■■ 4.68
PABPN1-201ENST00000216727 DISP1Q96F81 1524 aa44.28■■■■■ 4.68
PABPN1-201ENST00000216727 KIAA0556O60303 1618 aa44.28■■■■■ 4.68
PABPN1-201ENST00000216727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP44.27■■■■■ 4.681e-10■□□□□ 11
PABPN1-201ENST00000216727 CEP170Q5SW79 1584 aa44.25■■■■■ 4.67
PABPN1-201ENST00000216727 EHBP1L1Q8N3D4 1523 aa44.23■■■■■ 4.67
PABPN1-201ENST00000216727 CLSPNQ9HAW4 1339 aa44.21■■■■■ 4.67
PABPN1-201ENST00000216727 NUP160Q12769 1436 aa44.21■■■■■ 4.67
PABPN1-201ENST00000216727 DHX57Q6P158 1386 aaKnown RBP44.17■■■■■ 4.66
PABPN1-201ENST00000216727 EPRSP07814 1512 aaKnown RBP44.15■■■■■ 4.66
PABPN1-201ENST00000216727 SUPT6HQ7KZ85 1726 aaKnown RBP44.14■■■■■ 4.66
PABPN1-201ENST00000216727 ITGAEP38570 1179 aa44.13■■■■■ 4.66
PABPN1-201ENST00000216727 FGD6Q6ZV73 1430 aa44.12■■■■■ 4.65
PABPN1-201ENST00000216727 NCOA2Q15596 1464 aa44.12■■■■■ 4.65
PABPN1-201ENST00000216727 FAM50AQ14320 339 aaKnown RBP44.11■■■■■ 4.65
PABPN1-201ENST00000216727 MAGI3Q5TCQ9 1506 aa44.07■■■■■ 4.65
PABPN1-201ENST00000216727 FBLN2P98095 1184 aa44.07■■■■■ 4.65
PABPN1-201ENST00000216727 ARHGEF11O15085 1522 aa44.07■■■■■ 4.64
PABPN1-201ENST00000216727 MYOM3Q5VTT5 1437 aa44.02■■■■■ 4.64
PABPN1-201ENST00000216727 SETD5Q9C0A6 1442 aa43.99■■■■■ 4.63
PABPN1-201ENST00000216727 RAB3GAP2Q9H2M9 1393 aa43.99■■■■■ 4.63
PABPN1-201ENST00000216727 CDK13Q14004 1512 aaKnown RBP43.96■■■■■ 4.63
PABPN1-201ENST00000216727 RAPGEF6Q8TEU7 1601 aa43.95■■■■■ 4.63
PABPN1-201ENST00000216727 CARMIL2Q6F5E8 1435 aa43.93■■■■■ 4.62
PABPN1-201ENST00000216727 JPH4Q96JJ6 628 aa43.92■■■■■ 4.62
PABPN1-201ENST00000216727 NUP153P49790 1475 aaKnown RBP43.9■■■■■ 4.62
PABPN1-201ENST00000216727 PTPN23Q9H3S7 1636 aa43.79■■■■■ 4.6
PABPN1-201ENST00000216727 TCOF1Q13428 1488 aaKnown RBP43.76■■■■■ 4.6
PABPN1-201ENST00000216727 MIA2Q96PC5 1412 aa43.72■■■■■ 4.59
PABPN1-201ENST00000216727 PLB1Q6P1J6 1458 aa43.69■■■■■ 4.59
PABPN1-201ENST00000216727 CDK11AQ9UQ88 783 aaPredicted RBP43.69■■■■■ 4.58
PABPN1-201ENST00000216727 ARID3CA6NKF2 412 aa43.68■■■■■ 4.58
PABPN1-201ENST00000216727 CHD1O14646 1710 aa43.67■■■■■ 4.58
PABPN1-201ENST00000216727 PTPRKQ15262 1439 aa43.67■■■■■ 4.58
PABPN1-201ENST00000216727 HFM1A2PYH4 1435 aa43.64■■■■■ 4.58
PABPN1-201ENST00000216727 MAPKBP1O60336 1514 aa43.63■■■■■ 4.57
PABPN1-201ENST00000216727 ZNF316A6NFI3 1004 aaPredicted RBP43.61■■■■■ 4.57
PABPN1-201ENST00000216727 ABCA8O94911 1581 aa43.58■■■■■ 4.57
PABPN1-201ENST00000216727 TROQ12816 1431 aaPredicted RBP43.55■■■■■ 4.56
PABPN1-201ENST00000216727 PRG4Q92954 1404 aaPredicted RBP43.54■■■■■ 4.56
PABPN1-201ENST00000216727 NAIPQ13075 1403 aa43.48■■■■■ 4.55
PABPN1-201ENST00000216727 SHROOM2Q13796 1616 aa43.47■■■■■ 4.55
PABPN1-201ENST00000216727 ADCY10Q96PN6 1610 aa43.45■■■■■ 4.55
PABPN1-201ENST00000216727 AKNAQ7Z591 1439 aa43.43■■■■■ 4.54
PABPN1-201ENST00000216727 DIEXFQ68CQ4 756 aaKnown RBP43.43■■■■■ 4.54
PABPN1-201ENST00000216727 PTPRGP23470 1445 aa43.38■■■■■ 4.54
PABPN1-201ENST00000216727 UACAQ9BZF9 1416 aa43.35■■■■■ 4.53
PABPN1-201ENST00000216727 ATP10BO94823 1461 aa43.34■■■■■ 4.53
PABPN1-201ENST00000216727 GCC2Q8IWJ2 1684 aa43.33■■■■■ 4.53
PABPN1-201ENST00000216727 ITSN2Q9NZM3 1697 aa43.31■■■■■ 4.52
PABPN1-201ENST00000216727 KIF14Q15058 1648 aa43.29■■■■■ 4.52
PABPN1-201ENST00000216727 DNMT1P26358 1616 aaKnown RBP43.27■■■■■ 4.52
PABPN1-201ENST00000216727 GPATCH8Q9UKJ3 1502 aaKnown RBP43.26■■■■■ 4.51
PABPN1-201ENST00000216727 PLEKHD1A6NEE1 506 aa43.25■■■■■ 4.51
PABPN1-201ENST00000216727 DAPK1P53355 1430 aa43.24■■■■■ 4.51
PABPN1-201ENST00000216727 TIMELESSQ9UNS1 1208 aa43.21■■■■■ 4.51
PABPN1-201ENST00000216727 ROCK1Q13464 1354 aa43.2■■■■■ 4.51
PABPN1-201ENST00000216727 CHIC2Q9UKJ5 165 aa43.19■■■■■ 4.5
PABPN1-201ENST00000216727 CLASP1Q7Z460 1538 aa43.19■■■■■ 4.5
PABPN1-201ENST00000216727 ABCC5O15440 1437 aa43.19■■■■■ 4.5
PABPN1-201ENST00000216727 RRP7BPQ9NSQ0 103 aa43.17■■■■■ 4.5
PABPN1-201ENST00000216727 CFDP1Q9UEE9 299 aaPredicted RBP43.15■■■■■ 4.5
PABPN1-201ENST00000216727 ZNF644Q9H582 1327 aaPredicted RBP43.14■■■■■ 4.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms