RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 P3h3Q8CG70 732 aa15.66■□□□□ 0.1
Scn8a-208ENSMUST00000200963 Wdr43Q6ZQL4 677 aaKnown RBP15.66■□□□□ 0.1
Scn8a-208ENSMUST00000200963 Ubl4bQ9CQ84 188 aa15.66■□□□□ 0.1
Scn8a-208ENSMUST00000200963 Aplp2Q06335 707 aa15.64■□□□□ 0.09
Scn8a-208ENSMUST00000200963 Clstn2Q9ER65 966 aa15.61■□□□□ 0.09
Scn8a-208ENSMUST00000200963 Cep164Q5DU05 1446 aa15.6■□□□□ 0.09
Scn8a-208ENSMUST00000200963 Irx6Q9ER75 438 aa15.6■□□□□ 0.09
Scn8a-208ENSMUST00000200963 BlmO88700 1416 aa15.59■□□□□ 0.09
Scn8a-208ENSMUST00000200963 Hsp90ab1P11499 724 aaKnown RBP15.55■□□□□ 0.08
Scn8a-208ENSMUST00000200963 Dcaf1Q80TR8 1506 aa15.53■□□□□ 0.08
Scn8a-208ENSMUST00000200963 Trim44Q9QXA7 346 aa15.53■□□□□ 0.08
Scn8a-208ENSMUST00000200963 Rgl3Q3UYI5 709 aa15.52■□□□□ 0.07
Scn8a-208ENSMUST00000200963 Arid4bA2CG63 1314 aaKnown RBP15.52■□□□□ 0.07
Scn8a-208ENSMUST00000200963 Trim30dE9PWL0 497 aa15.51■□□□□ 0.07
Scn8a-208ENSMUST00000200963 CanxP35564 591 aaKnown RBP15.5■□□□□ 0.07
Scn8a-208ENSMUST00000200963 Znf326O88291 580 aa15.48■□□□□ 0.07
Scn8a-208ENSMUST00000200963 PtmaP26350 111 aa15.46■□□□□ 0.07
Scn8a-208ENSMUST00000200963 Abcc8B2RUS7 1588 aa15.44■□□□□ 0.06
Scn8a-208ENSMUST00000200963 IqubQ8CDK3 788 aa15.43■□□□□ 0.06
Scn8a-208ENSMUST00000200963 Kdm2aP59997 1161 aa15.42■□□□□ 0.06
Scn8a-208ENSMUST00000200963 Apbb1Q9QXJ1 710 aa15.41■□□□□ 0.06
Scn8a-208ENSMUST00000200963 Ofd1Q80Z25 1017 aa15.41■□□□□ 0.06
Scn8a-208ENSMUST00000200963 Setd5Q5XJV7 1441 aa15.4■□□□□ 0.06
Scn8a-208ENSMUST00000200963 Grwd1Q810D6 446 aaKnown RBP15.37■□□□□ 0.05
Scn8a-208ENSMUST00000200963 Plcb2A3KGF7 1181 aa15.37■□□□□ 0.05
Scn8a-208ENSMUST00000200963 Srpk2O54781 681 aaKnown RBP15.37■□□□□ 0.05
Scn8a-208ENSMUST00000200963 Ccdc9Q8VC31 543 aaKnown RBP15.37■□□□□ 0.05
Scn8a-208ENSMUST00000200963 Exosc9Q9JHI7 438 aaKnown RBP15.35■□□□□ 0.05
Scn8a-208ENSMUST00000200963 Neurod2Q62414 383 aa15.35■□□□□ 0.05
Scn8a-208ENSMUST00000200963 Rtn4Q99P72 1162 aaKnown RBP15.35■□□□□ 0.05
Scn8a-208ENSMUST00000200963 Rb1cc1Q9ESK9 1588 aa15.33■□□□□ 0.04
Scn8a-208ENSMUST00000200963 Mapk8ip3Q9ESN9 1337 aa15.32■□□□□ 0.04
Scn8a-208ENSMUST00000200963 Gm20521D3Z5F7 333 aa15.31■□□□□ 0.04
Scn8a-208ENSMUST00000200963 Clstn1Q9EPL2 979 aa15.31■□□□□ 0.04
Scn8a-208ENSMUST00000200963 Card11Q8CIS0 1159 aa15.31■□□□□ 0.04
Scn8a-208ENSMUST00000200963 NgefQ8CHT1 710 aa15.31■□□□□ 0.04
Scn8a-208ENSMUST00000200963 Mroh3A0A1D5RM54 893 aa15.3■□□□□ 0.04
Scn8a-208ENSMUST00000200963 Gm6268A2A3U9 297 aa15.28■□□□□ 0.04
Scn8a-208ENSMUST00000200963 Fam71e1A1L3C1 212 aa15.28■□□□□ 0.04
Scn8a-208ENSMUST00000200963 Armcx1Q9CX83 456 aa15.27■□□□□ 0.03
Scn8a-208ENSMUST00000200963 PnnO35691 725 aaKnown RBP15.26■□□□□ 0.03
Scn8a-208ENSMUST00000200963 Htatsf1Q8BGC0 757 aa15.26■□□□□ 0.03
Scn8a-208ENSMUST00000200963 Dbr1Q923B1 550 aa15.26■□□□□ 0.03
Scn8a-208ENSMUST00000200963 Arhgap27A2AB59 869 aa15.25■□□□□ 0.03
Scn8a-208ENSMUST00000200963 Aebp2Q9Z248 504 aaKnown RBP15.25■□□□□ 0.03
Scn8a-208ENSMUST00000200963 Stag3O70576 1240 aa15.23■□□□□ 0.03
Scn8a-208ENSMUST00000200963 Pes1Q9EQ61 584 aaKnown RBP15.23■□□□□ 0.03
Scn8a-208ENSMUST00000200963 1700019A02RikA0A087WPV9 146 aa15.22■□□□□ 0.03
Scn8a-208ENSMUST00000200963 Stk24Q99KH8 431 aa15.22■□□□□ 0.03
Scn8a-208ENSMUST00000200963 Rrp7aQ9D1C9 280 aaKnown RBP15.2■□□□□ 0.02
Scn8a-208ENSMUST00000200963 Map7O88735 730 aa15.2■□□□□ 0.02
Scn8a-208ENSMUST00000200963 MyclP10166 368 aa15.2■□□□□ 0.02
Scn8a-208ENSMUST00000200963 Cwc22Q8C5N3 908 aaKnown RBP15.19■□□□□ 0.02
Scn8a-208ENSMUST00000200963 Ppm1gQ61074 542 aa15.18■□□□□ 0.02
Scn8a-208ENSMUST00000200963 Iqcf3Q9D498 203 aa15.18■□□□□ 0.02
Scn8a-208ENSMUST00000200963 Kif15Q6P9L6 1387 aa15.18■□□□□ 0.02
Scn8a-208ENSMUST00000200963 Casc1Q6TDU8 730 aa15.18■□□□□ 0.02
Scn8a-208ENSMUST00000200963 Chmp4bQ9D8B3 224 aaKnown RBP15.17■□□□□ 0.02
Scn8a-208ENSMUST00000200963 Spryd3E9Q9B3 442 aa15.17■□□□□ 0.02
Scn8a-208ENSMUST00000200963 Hsp90b1P08113 802 aaKnown RBP15.17■□□□□ 0.02
Scn8a-208ENSMUST00000200963 Cnga1P29974 684 aa15.16■□□□□ 0.02
Scn8a-208ENSMUST00000200963 Ccdc27Q3V036 639 aa15.16■□□□□ 0.02
Scn8a-208ENSMUST00000200963 B4galnt3Q6L8S8 986 aa15.16■□□□□ 0.02
Scn8a-208ENSMUST00000200963 NudcO35685 332 aaKnown RBP15.15■□□□□ 0.02
Scn8a-208ENSMUST00000200963 Mtus2Q3UHD3 1353 aa15.13■□□□□ 0.01
Scn8a-208ENSMUST00000200963 Rsf1E9PWW9 1441 aaKnown RBP15.12■□□□□ 0.01
Scn8a-208ENSMUST00000200963 1700123L14RikQ3V2K7 440 aa15.12■□□□□ 0.01
Scn8a-208ENSMUST00000200963 Sh3bp5Q9Z131 463 aa15.12■□□□□ 0.01
Scn8a-208ENSMUST00000200963 Eea1Q8BL66 1411 aa15.12■□□□□ 0.01
Scn8a-208ENSMUST00000200963 Ccdc18Q640L5 1455 aa15.08■□□□□ 0.01
Scn8a-208ENSMUST00000200963 Adam1bQ8R534 806 aa15.08■□□□□ 0
Scn8a-208ENSMUST00000200963 MccE9PWI3 1003 aa15.07■□□□□ 0
Scn8a-208ENSMUST00000200963 KnstrnQ9D9Z1 312 aaKnown RBP15.06■□□□□ 0
Scn8a-208ENSMUST00000200963 Zfp777B9EKF4 885 aa15.05■□□□□ 0
Scn8a-208ENSMUST00000200963 Ercc6F8VPZ5 1481 aa15.03■□□□□ -0
Scn8a-208ENSMUST00000200963 Golga3P55937 1487 aa15.02■□□□□ -0
Scn8a-208ENSMUST00000200963 Rassf8Q8CJ96 419 aa15.02□□□□□ -0.01
Scn8a-208ENSMUST00000200963 Slc4a3P16283 1227 aa15.02□□□□□ -0.01
Scn8a-208ENSMUST00000200963 Anapc15P60007 132 aa15.02□□□□□ -0.01
Scn8a-208ENSMUST00000200963 Rwdd1Q9CQK7 243 aa15.02□□□□□ -0.01
Scn8a-208ENSMUST00000200963 Wwc2Q6NXJ0 1187 aa15□□□□□ -0.01
Scn8a-208ENSMUST00000200963 Erich6bQ9D4S6 220 aa15□□□□□ -0.01
Scn8a-208ENSMUST00000200963 U2surpQ6NV83 1029 aaKnown RBP15□□□□□ -0.01
Scn8a-208ENSMUST00000200963 Pcmtd1P59913 357 aa14.99□□□□□ -0.01
Scn8a-208ENSMUST00000200963 Ecm2Q5FW85 670 aa14.99□□□□□ -0.01
Scn8a-208ENSMUST00000200963 Znf316Q6PGE4 1016 aa14.99□□□□□ -0.01
Scn8a-208ENSMUST00000200963 Rtf1A2AQ19 715 aaKnown RBP14.99□□□□□ -0.01
Scn8a-208ENSMUST00000200963 HnrnpuQ8VEK3 800 aaKnown RBP14.99□□□□□ -0.01
Scn8a-208ENSMUST00000200963 Plin1Q8CGN5 517 aa14.98□□□□□ -0.01
Scn8a-208ENSMUST00000200963 Mbd3Q9Z2D8 285 aaKnown RBP14.98□□□□□ -0.01
Scn8a-208ENSMUST00000200963 Mia2Q91ZV0 1396 aa14.97□□□□□ -0.01
Scn8a-208ENSMUST00000200963 SafbD3YXK2 937 aaKnown RBP14.97□□□□□ -0.01
Scn8a-208ENSMUST00000200963 Eif4g2Q62448 906 aaKnown RBP14.96□□□□□ -0.02
Scn8a-208ENSMUST00000200963 Speer4f1Q9D5Q6 258 aa14.95□□□□□ -0.02
Scn8a-208ENSMUST00000200963 Dnttip2Q8R2M2 758 aaKnown RBP14.94□□□□□ -0.02
Scn8a-208ENSMUST00000200963 Hspa5P20029 655 aaKnown RBP14.94□□□□□ -0.02
Scn8a-208ENSMUST00000200963 Fhad1A6PWD2 1420 aa14.94□□□□□ -0.02
Scn8a-208ENSMUST00000200963 Stk26Q99JT2 416 aa14.93□□□□□ -0.02
Scn8a-208ENSMUST00000200963 Gm973E9Q295 1059 aa14.93□□□□□ -0.02
Scn8a-208ENSMUST00000200963 Ppp1r18Q8BQ30 594 aa14.92□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 56.3 ms