RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Rhox8Q6VSS7 320 aa20.84■□□□□ 0.93
Scn8a-208ENSMUST00000200963 Rpgrip1Q9EPQ2 1331 aa18.93■□□□□ 0.62
Scn8a-208ENSMUST00000200963 Ehmt2Q9Z148 1263 aaKnown RBP18.9■□□□□ 0.62
Scn8a-208ENSMUST00000200963 Cngb1E1AZ71 1325 aa18.58■□□□□ 0.56
Scn8a-208ENSMUST00000200963 Wdr66E9Q743 1299 aa18.53■□□□□ 0.56
Scn8a-208ENSMUST00000200963 Las1lA2BE28 776 aaKnown RBP18.46■□□□□ 0.55
Scn8a-208ENSMUST00000200963 Ube2uB1AUC4 352 aa18.43■□□□□ 0.54
Scn8a-208ENSMUST00000200963 Esf1Q3V1V3 845 aaKnown RBP18.4■□□□□ 0.54
Scn8a-208ENSMUST00000200963 Ccdc136Q3TVA9 1136 aa18.37■□□□□ 0.53
Scn8a-208ENSMUST00000200963 Pelp1Q9DBD5 1123 aaKnown RBP18.31■□□□□ 0.52
Scn8a-208ENSMUST00000200963 Zeb1Q64318 1117 aa18.23■□□□□ 0.51
Scn8a-208ENSMUST00000200963 Gab3Q8BSM5 595 aa18.18■□□□□ 0.5
Scn8a-208ENSMUST00000200963 Npm2Q80W85 207 aa18.09■□□□□ 0.49
Scn8a-208ENSMUST00000200963 Myt1lP97500 1187 aa17.94■□□□□ 0.46
Scn8a-208ENSMUST00000200963 Trim41Q5NCC3 630 aa17.87■□□□□ 0.45
Scn8a-208ENSMUST00000200963 Amer1Q7TS75 1132 aa17.76■□□□□ 0.43
Scn8a-208ENSMUST00000200963 CenpbP27790 599 aa17.59■□□□□ 0.41
Scn8a-208ENSMUST00000200963 Slc24a1Q91WD8 1130 aa17.56■□□□□ 0.4
Scn8a-208ENSMUST00000200963 UbtfP25976 765 aaKnown RBP17.54■□□□□ 0.4
Scn8a-208ENSMUST00000200963 Stra8P70278 393 aa17.45■□□□□ 0.38
Scn8a-208ENSMUST00000200963 NefmP08553 848 aa17.41■□□□□ 0.38
Scn8a-208ENSMUST00000200963 Acin1Q9JIX8 1338 aaKnown RBP17.4■□□□□ 0.38
Scn8a-208ENSMUST00000200963 NischQ80TM9 1593 aa17.29■□□□□ 0.36
Scn8a-208ENSMUST00000200963 Il27Q8K3I6 234 aa17.21■□□□□ 0.35
Scn8a-208ENSMUST00000200963 Ttbk1Q6PCN3 1308 aa17.17■□□□□ 0.34
Scn8a-208ENSMUST00000200963 4930567H17RikQ3V0K5 233 aa17.1■□□□□ 0.33
Scn8a-208ENSMUST00000200963 Cdk11bP24788 784 aaKnown RBP17.08■□□□□ 0.33
Scn8a-208ENSMUST00000200963 Neurod1Q60867 357 aa17.08■□□□□ 0.32
Scn8a-208ENSMUST00000200963 NrdcQ8BHG1 1161 aa17.06■□□□□ 0.32
Scn8a-208ENSMUST00000200963 4933416C03RikQ3V063 378 aa17.05■□□□□ 0.32
Scn8a-208ENSMUST00000200963 Ap3b1Q9Z1T1 1105 aa17.05■□□□□ 0.32
Scn8a-208ENSMUST00000200963 Fam50aQ9WV03 339 aaKnown RBP17.02■□□□□ 0.32
Scn8a-208ENSMUST00000200963 Anp32bQ9EST5 272 aaKnown RBP17.02■□□□□ 0.31
Scn8a-208ENSMUST00000200963 Os9Q8K2C7 672 aa17■□□□□ 0.31
Scn8a-208ENSMUST00000200963 Eif5bQ05D44 1216 aaKnown RBP16.99■□□□□ 0.31
Scn8a-208ENSMUST00000200963 NeflP08551 543 aa16.97■□□□□ 0.31
Scn8a-208ENSMUST00000200963 NclP09405 707 aaKnown RBP16.95■□□□□ 0.3
Scn8a-208ENSMUST00000200963 Ccdc180J3QNE4 1664 aa16.89■□□□□ 0.29
Scn8a-208ENSMUST00000200963 Ppargc1bQ8VHJ7 1014 aa16.88■□□□□ 0.29
Scn8a-208ENSMUST00000200963 Tnnt3Q9QZ47 272 aa16.87■□□□□ 0.29
Scn8a-208ENSMUST00000200963 Nop58Q6DFW4 536 aaKnown RBP16.85■□□□□ 0.29
Scn8a-208ENSMUST00000200963 HrcG5E8J6 738 aa16.81■□□□□ 0.28
Scn8a-208ENSMUST00000200963 Pcgf6Q99NA9 353 aa16.8■□□□□ 0.28
Scn8a-208ENSMUST00000200963 TonslQ6NZL6 1363 aa16.67■□□□□ 0.26
Scn8a-208ENSMUST00000200963 Zcchc6Q5BLK4 1491 aaKnown RBP16.65■□□□□ 0.26
Scn8a-208ENSMUST00000200963 Myt1Q8CFC2 1127 aa16.65■□□□□ 0.26
Scn8a-208ENSMUST00000200963 Zbtb7cQ8VCZ7 619 aa16.62■□□□□ 0.25
Scn8a-208ENSMUST00000200963 Rtl1Q7M732 1744 aa16.59■□□□□ 0.25
Scn8a-208ENSMUST00000200963 Supt5hO55201 1082 aaKnown RBP16.56■□□□□ 0.24
Scn8a-208ENSMUST00000200963 Chic1Q8CBW7 227 aa16.49■□□□□ 0.23
Scn8a-208ENSMUST00000200963 Gm13697A2AK42 830 aa16.48■□□□□ 0.23
Scn8a-208ENSMUST00000200963 Hnrnpul2Q00PI9 745 aaKnown RBP16.47■□□□□ 0.23
Scn8a-208ENSMUST00000200963 Mier1Q5UAK0 511 aa16.45■□□□□ 0.22
Scn8a-208ENSMUST00000200963 Lmod2Q3UHZ5 550 aa16.45■□□□□ 0.22
Scn8a-208ENSMUST00000200963 Abcc9P70170 1546 aa16.44■□□□□ 0.22
Scn8a-208ENSMUST00000200963 Rtl5Q5DTT4 599 aa16.44■□□□□ 0.22
Scn8a-208ENSMUST00000200963 Gm35339A0A140LHH9 1649 aa16.43■□□□□ 0.22
Scn8a-208ENSMUST00000200963 Zbtb4Q5F293 982 aa16.4■□□□□ 0.22
Scn8a-208ENSMUST00000200963 Ifnlr1Q8CGK5 535 aa16.39■□□□□ 0.21
Scn8a-208ENSMUST00000200963 Atp1b4Q99ME6 356 aa16.34■□□□□ 0.21
Scn8a-208ENSMUST00000200963 Erich6D3Z6S9 713 aa16.34■□□□□ 0.21
Scn8a-208ENSMUST00000200963 Nlrp6Q91WS2 869 aa16.34■□□□□ 0.21
Scn8a-208ENSMUST00000200963 Plekhg3Q4VAC9 1341 aa16.33■□□□□ 0.2
Scn8a-208ENSMUST00000200963 Npm1Q61937 292 aaKnown RBP16.32■□□□□ 0.2
Scn8a-208ENSMUST00000200963 Prdm10Q3UTQ7 1184 aa16.3■□□□□ 0.2
Scn8a-208ENSMUST00000200963 DaxxO35613 739 aa16.3■□□□□ 0.2
Scn8a-208ENSMUST00000200963 Polr3glQ8R0C0 218 aa16.29■□□□□ 0.2
Scn8a-208ENSMUST00000200963 Anp32aO35381 247 aa16.25■□□□□ 0.19
Scn8a-208ENSMUST00000200963 ClspnQ80YR7 1315 aa16.22■□□□□ 0.19
Scn8a-208ENSMUST00000200963 Mapk8ip2Q9ERE9 830 aa16.22■□□□□ 0.19
Scn8a-208ENSMUST00000200963 ArxO35085 564 aa16.2■□□□□ 0.18
Scn8a-208ENSMUST00000200963 Gm13695A2AK44 830 aa16.18■□□□□ 0.18
Scn8a-208ENSMUST00000200963 Fkbp15Q6P9Q6 1216 aaKnown RBP16.09■□□□□ 0.17
Scn8a-208ENSMUST00000200963 Csrnp3P59055 597 aa16.07■□□□□ 0.16
Scn8a-208ENSMUST00000200963 Gm38655A0A286YDK6 273 aa16.06■□□□□ 0.16
Scn8a-208ENSMUST00000200963 Eid3Q3V124 375 aa16.06■□□□□ 0.16
Scn8a-208ENSMUST00000200963 DiexfQ8BTT6 772 aaKnown RBP16.05■□□□□ 0.16
Scn8a-208ENSMUST00000200963 Plppr3Q7TPB0 716 aa16.05■□□□□ 0.16
Scn8a-208ENSMUST00000200963 Rangap1P46061 589 aaKnown RBP16.02■□□□□ 0.16
Scn8a-208ENSMUST00000200963 Hdac5Q9Z2V6 1113 aa16.01■□□□□ 0.15
Scn8a-208ENSMUST00000200963 CatipB9EKE5 520 aa15.9■□□□□ 0.14
Scn8a-208ENSMUST00000200963 Clip1Q922J3 1391 aa15.9■□□□□ 0.14
Scn8a-208ENSMUST00000200963 Rad21Q61550 635 aaKnown RBP15.88■□□□□ 0.13
Scn8a-208ENSMUST00000200963 Upf2A2AT37 1269 aaKnown RBP15.87■□□□□ 0.13
Scn8a-208ENSMUST00000200963 Ppp4r2Q0VGB7 417 aa15.85■□□□□ 0.13
Scn8a-208ENSMUST00000200963 Sall2Q9QX96 1004 aa15.83■□□□□ 0.13
Scn8a-208ENSMUST00000200963 Hsp90aa1P07901 733 aaKnown RBP15.82■□□□□ 0.12
Scn8a-208ENSMUST00000200963 Calr4Q3TQS0 420 aa15.81■□□□□ 0.12
Scn8a-208ENSMUST00000200963 Chic2Q9D9G3 165 aa15.79■□□□□ 0.12
Scn8a-208ENSMUST00000200963 Ythdc1E9Q5K9 736 aaKnown RBP15.78■□□□□ 0.12
Scn8a-208ENSMUST00000200963 Ccer2J3QPU5 274 aa15.77■□□□□ 0.12
Scn8a-208ENSMUST00000200963 Anks4bQ8K3X6 423 aa15.75■□□□□ 0.11
Scn8a-208ENSMUST00000200963 DekQ7TNV0 380 aaKnown RBP15.75■□□□□ 0.11
Scn8a-208ENSMUST00000200963 Vsig10D3YX43 558 aa15.74■□□□□ 0.11
Scn8a-208ENSMUST00000200963 Fgd1P52734 960 aa15.72■□□□□ 0.11
Scn8a-208ENSMUST00000200963 Lmod3E9QA62 571 aa15.72■□□□□ 0.11
Scn8a-208ENSMUST00000200963 Safb2Q80YR5 991 aaKnown RBP15.7■□□□□ 0.1
Scn8a-208ENSMUST00000200963 Brd4Q9ESU6 1400 aaKnown RBP15.7■□□□□ 0.1
Scn8a-208ENSMUST00000200963 Trim26Q99PN3 545 aa15.69■□□□□ 0.1
Scn8a-208ENSMUST00000200963 Mrs2Q5NCE8 434 aa15.68■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 103.8 ms