RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Fgd1P52734 960 aa16.95■□□□□ 0.3
Gm28043-201ENSMUST00000130871 Setd5Q5XJV7 1441 aa16.95■□□□□ 0.3
Gm28043-201ENSMUST00000130871 DekQ7TNV0 380 aaKnown RBP16.94■□□□□ 0.3
Gm28043-201ENSMUST00000130871 Hsp90aa1P07901 733 aaKnown RBP16.92■□□□□ 0.3
Gm28043-201ENSMUST00000130871 Rgl3Q3UYI5 709 aa16.92■□□□□ 0.3
Gm28043-201ENSMUST00000130871 Ccdc9Q8VC31 543 aaKnown RBP16.92■□□□□ 0.3
Gm28043-201ENSMUST00000130871 Trim26Q99PN3 545 aa16.89■□□□□ 0.29
Gm28043-201ENSMUST00000130871 CanxP35564 591 aaKnown RBP16.88■□□□□ 0.29
Gm28043-201ENSMUST00000130871 Trim30dE9PWL0 497 aa16.87■□□□□ 0.29
Gm28043-201ENSMUST00000130871 Vsig10D3YX43 558 aa16.87■□□□□ 0.29
Gm28043-201ENSMUST00000130871 Ofd1Q80Z25 1017 aa16.85■□□□□ 0.29
Gm28043-201ENSMUST00000130871 Ythdc1E9Q5K9 736 aaKnown RBP16.85■□□□□ 0.29
Gm28043-201ENSMUST00000130871 Hsp90ab1P11499 724 aaKnown RBP16.84■□□□□ 0.29
Gm28043-201ENSMUST00000130871 Safb2Q80YR5 991 aaKnown RBP16.84■□□□□ 0.29
Gm28043-201ENSMUST00000130871 Aebp2Q9Z248 504 aaKnown RBP16.84■□□□□ 0.29
Gm28043-201ENSMUST00000130871 Trim44Q9QXA7 346 aa16.83■□□□□ 0.28
Gm28043-201ENSMUST00000130871 P3h3Q8CG70 732 aa16.83■□□□□ 0.28
Gm28043-201ENSMUST00000130871 Rb1cc1Q9ESK9 1588 aa16.82■□□□□ 0.28
Gm28043-201ENSMUST00000130871 Lmod3E9QA62 571 aa16.81■□□□□ 0.28
Gm28043-201ENSMUST00000130871 Grwd1Q810D6 446 aaKnown RBP16.76■□□□□ 0.27
Gm28043-201ENSMUST00000130871 Kdm2aP59997 1161 aa16.76■□□□□ 0.27
Gm28043-201ENSMUST00000130871 1700123L14RikQ3V2K7 440 aa16.74■□□□□ 0.27
Gm28043-201ENSMUST00000130871 IqubQ8CDK3 788 aa16.73■□□□□ 0.27
Gm28043-201ENSMUST00000130871 Fam71e1A1L3C1 212 aa16.72■□□□□ 0.27
Gm28043-201ENSMUST00000130871 Card11Q8CIS0 1159 aa16.71■□□□□ 0.27
Gm28043-201ENSMUST00000130871 Mroh3A0A1D5RM54 893 aa16.71■□□□□ 0.27
Gm28043-201ENSMUST00000130871 Cwc22Q8C5N3 908 aaKnown RBP16.71■□□□□ 0.27
Gm28043-201ENSMUST00000130871 Irx6Q9ER75 438 aa16.69■□□□□ 0.26
Gm28043-201ENSMUST00000130871 Srpk2O54781 681 aaKnown RBP16.69■□□□□ 0.26
Gm28043-201ENSMUST00000130871 Apbb1Q9QXJ1 710 aa16.69■□□□□ 0.26
Gm28043-201ENSMUST00000130871 Eea1Q8BL66 1411 aa16.68■□□□□ 0.26
Gm28043-201ENSMUST00000130871 Arid4bA2CG63 1314 aaKnown RBP16.68■□□□□ 0.26
Gm28043-201ENSMUST00000130871 Htatsf1Q8BGC0 757 aa16.68■□□□□ 0.26
Gm28043-201ENSMUST00000130871 Kif15Q6P9L6 1387 aa16.66■□□□□ 0.26
Gm28043-201ENSMUST00000130871 Exosc9Q9JHI7 438 aaKnown RBP16.66■□□□□ 0.26
Gm28043-201ENSMUST00000130871 PtmaP26350 111 aa16.65■□□□□ 0.26
Gm28043-201ENSMUST00000130871 Gm20521D3Z5F7 333 aa16.65■□□□□ 0.26
Gm28043-201ENSMUST00000130871 Neurod2Q62414 383 aa16.64■□□□□ 0.26
Gm28043-201ENSMUST00000130871 Rsf1E9PWW9 1441 aaKnown RBP16.64■□□□□ 0.25
Gm28043-201ENSMUST00000130871 Golga3P55937 1487 aa16.64■□□□□ 0.25
Gm28043-201ENSMUST00000130871 Plcb2A3KGF7 1181 aa16.64■□□□□ 0.25
Gm28043-201ENSMUST00000130871 Mapk8ip3Q9ESN9 1337 aa16.63■□□□□ 0.25
Gm28043-201ENSMUST00000130871 Ppm1gQ61074 542 aa16.63■□□□□ 0.25
Gm28043-201ENSMUST00000130871 Ccdc27Q3V036 639 aa16.62■□□□□ 0.25
Gm28043-201ENSMUST00000130871 Arhgap27A2AB59 869 aa16.58■□□□□ 0.25
Gm28043-201ENSMUST00000130871 Rrp7aQ9D1C9 280 aaKnown RBP16.57■□□□□ 0.24
Gm28043-201ENSMUST00000130871 Chmp4bQ9D8B3 224 aaKnown RBP16.57■□□□□ 0.24
Gm28043-201ENSMUST00000130871 Znf326O88291 580 aa16.55■□□□□ 0.24
Gm28043-201ENSMUST00000130871 Gm6268A2A3U9 297 aa16.54■□□□□ 0.24
Gm28043-201ENSMUST00000130871 Mtus2Q3UHD3 1353 aa16.54■□□□□ 0.24
Gm28043-201ENSMUST00000130871 Map7O88735 730 aa16.53■□□□□ 0.24
Gm28043-201ENSMUST00000130871 Dbr1Q923B1 550 aa16.53■□□□□ 0.24
Gm28043-201ENSMUST00000130871 Ccdc18Q640L5 1455 aa16.52■□□□□ 0.23
Gm28043-201ENSMUST00000130871 NudcO35685 332 aaKnown RBP16.51■□□□□ 0.23
Gm28043-201ENSMUST00000130871 Iqcf3Q9D498 203 aa16.51■□□□□ 0.23
Gm28043-201ENSMUST00000130871 Mia2Q91ZV0 1396 aa16.5■□□□□ 0.23
Gm28043-201ENSMUST00000130871 NacadQ5SWP3 1504 aa16.49■□□□□ 0.23
Gm28043-201ENSMUST00000130871 Zfp777B9EKF4 885 aa16.49■□□□□ 0.23
Gm28043-201ENSMUST00000130871 Stag3O70576 1240 aa16.49■□□□□ 0.23
Gm28043-201ENSMUST00000130871 Stk24Q99KH8 431 aa16.49■□□□□ 0.23
Gm28043-201ENSMUST00000130871 Wwc2Q6NXJ0 1187 aa16.47■□□□□ 0.23
Gm28043-201ENSMUST00000130871 B4galnt3Q6L8S8 986 aa16.46■□□□□ 0.23
Gm28043-201ENSMUST00000130871 Armcx1Q9CX83 456 aa16.46■□□□□ 0.23
Gm28043-201ENSMUST00000130871 1700019A02RikA0A087WPV9 146 aa16.46■□□□□ 0.23
Gm28043-201ENSMUST00000130871 Casc1Q6TDU8 730 aa16.45■□□□□ 0.22
Gm28043-201ENSMUST00000130871 PnnO35691 725 aaKnown RBP16.45■□□□□ 0.22
Gm28043-201ENSMUST00000130871 Hspa5P20029 655 aaKnown RBP16.45■□□□□ 0.22
Gm28043-201ENSMUST00000130871 NgefQ8CHT1 710 aa16.44■□□□□ 0.22
Gm28043-201ENSMUST00000130871 Rwdd1Q9CQK7 243 aa16.44■□□□□ 0.22
Gm28043-201ENSMUST00000130871 Rtn4Q99P72 1162 aaKnown RBP16.44■□□□□ 0.22
Gm28043-201ENSMUST00000130871 Pes1Q9EQ61 584 aaKnown RBP16.44■□□□□ 0.22
Gm28043-201ENSMUST00000130871 Mbd3Q9Z2D8 285 aaKnown RBP16.43■□□□□ 0.22
Gm28043-201ENSMUST00000130871 SafbD3YXK2 937 aaKnown RBP16.42■□□□□ 0.22
Gm28043-201ENSMUST00000130871 Hsp90b1P08113 802 aaKnown RBP16.41■□□□□ 0.22
Gm28043-201ENSMUST00000130871 KnstrnQ9D9Z1 312 aaKnown RBP16.41■□□□□ 0.22
Gm28043-201ENSMUST00000130871 Spryd3E9Q9B3 442 aa16.4■□□□□ 0.22
Gm28043-201ENSMUST00000130871 Cnga1P29974 684 aa16.4■□□□□ 0.22
Gm28043-201ENSMUST00000130871 Baz1aO88379 1555 aa16.4■□□□□ 0.22
Gm28043-201ENSMUST00000130871 Tcerg1Q8CGF7 1100 aaKnown RBP16.38■□□□□ 0.21
Gm28043-201ENSMUST00000130871 Slc4a3P16283 1227 aa16.38■□□□□ 0.21
Gm28043-201ENSMUST00000130871 Chmp5Q9D7S9 219 aa16.36■□□□□ 0.21
Gm28043-201ENSMUST00000130871 Ercc6F8VPZ5 1481 aa16.35■□□□□ 0.21
Gm28043-201ENSMUST00000130871 Pkd2O35245 966 aa16.35■□□□□ 0.21
Gm28043-201ENSMUST00000130871 Map4P27546 1125 aaKnown RBP16.34■□□□□ 0.21
Gm28043-201ENSMUST00000130871 Adam1bQ8R534 806 aa16.34■□□□□ 0.21
Gm28043-201ENSMUST00000130871 HnrnpuQ8VEK3 800 aaKnown RBP16.33■□□□□ 0.21
Gm28043-201ENSMUST00000130871 Rundc1Q0VDN7 615 aa16.33■□□□□ 0.2
Gm28043-201ENSMUST00000130871 MccE9PWI3 1003 aa16.33■□□□□ 0.2
Gm28043-201ENSMUST00000130871 Supt16hQ920B9 1047 aa16.32■□□□□ 0.2
Gm28043-201ENSMUST00000130871 Irx3P81067 507 aa16.32■□□□□ 0.2
Gm28043-201ENSMUST00000130871 Speer4f1Q9D5Q6 258 aa16.31■□□□□ 0.2
Gm28043-201ENSMUST00000130871 Clstn1Q9EPL2 979 aa16.3■□□□□ 0.2
Gm28043-201ENSMUST00000130871 Fhad1A6PWD2 1420 aa16.29■□□□□ 0.2
Gm28043-201ENSMUST00000130871 MyclP10166 368 aa16.29■□□□□ 0.2
Gm28043-201ENSMUST00000130871 Zscan21Q07231 555 aa16.28■□□□□ 0.2
Gm28043-201ENSMUST00000130871 Exoc6Q8R313 802 aa16.28■□□□□ 0.2
Gm28043-201ENSMUST00000130871 Kif27Q7M6Z4 1394 aa16.27■□□□□ 0.2
Gm28043-201ENSMUST00000130871 Sh3bp5Q9Z131 463 aa16.27■□□□□ 0.2
Gm28043-201ENSMUST00000130871 AU015836B2RUM3 263 aa16.27■□□□□ 0.19
Gm28043-201ENSMUST00000130871 Dnai1Q8C0M8 701 aa16.26■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms