RNA–Protein interactions for RNA: ENSMUST00000130871.1

Gm28043-201, Transcript of E3 ubiquitin-protein ligase RNF8, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Gm28043, Length 6,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043-201ENSMUST00000130871 Rhox8Q6VSS7 320 aa22.69■■□□□ 1.22
Gm28043-201ENSMUST00000130871 Rpgrip1Q9EPQ2 1331 aa20.79■□□□□ 0.92
Gm28043-201ENSMUST00000130871 Ehmt2Q9Z148 1263 aaKnown RBP20.4■□□□□ 0.86
Gm28043-201ENSMUST00000130871 Cngb1E1AZ71 1325 aa20.13■□□□□ 0.81
Gm28043-201ENSMUST00000130871 Las1lA2BE28 776 aaKnown RBP20.05■□□□□ 0.8
Gm28043-201ENSMUST00000130871 Ccdc136Q3TVA9 1136 aa20.04■□□□□ 0.8
Gm28043-201ENSMUST00000130871 Wdr66E9Q743 1299 aa19.95■□□□□ 0.78
Gm28043-201ENSMUST00000130871 Esf1Q3V1V3 845 aaKnown RBP19.94■□□□□ 0.78
Gm28043-201ENSMUST00000130871 Ube2uB1AUC4 352 aa19.77■□□□□ 0.76
Gm28043-201ENSMUST00000130871 Zeb1Q64318 1117 aa19.72■□□□□ 0.75
Gm28043-201ENSMUST00000130871 Gab3Q8BSM5 595 aa19.72■□□□□ 0.75
Gm28043-201ENSMUST00000130871 Pelp1Q9DBD5 1123 aaKnown RBP19.69■□□□□ 0.74
Gm28043-201ENSMUST00000130871 Trim41Q5NCC3 630 aa19.64■□□□□ 0.73
Gm28043-201ENSMUST00000130871 Npm2Q80W85 207 aa19.55■□□□□ 0.72
Gm28043-201ENSMUST00000130871 Myt1lP97500 1187 aa19.42■□□□□ 0.7
Gm28043-201ENSMUST00000130871 Acin1Q9JIX8 1338 aaKnown RBP19.13■□□□□ 0.65
Gm28043-201ENSMUST00000130871 NefmP08553 848 aa19.12■□□□□ 0.65
Gm28043-201ENSMUST00000130871 CenpbP27790 599 aa19.11■□□□□ 0.65
Gm28043-201ENSMUST00000130871 NischQ80TM9 1593 aa19.11■□□□□ 0.65
Gm28043-201ENSMUST00000130871 UbtfP25976 765 aaKnown RBP19.05■□□□□ 0.64
Gm28043-201ENSMUST00000130871 Stra8P70278 393 aa18.99■□□□□ 0.63
Gm28043-201ENSMUST00000130871 Amer1Q7TS75 1132 aa18.93■□□□□ 0.62
Gm28043-201ENSMUST00000130871 Slc24a1Q91WD8 1130 aa18.87■□□□□ 0.61
Gm28043-201ENSMUST00000130871 HrcG5E8J6 738 aa18.71■□□□□ 0.59
Gm28043-201ENSMUST00000130871 Cdk11bP24788 784 aaKnown RBP18.66■□□□□ 0.58
Gm28043-201ENSMUST00000130871 Il27Q8K3I6 234 aa18.65■□□□□ 0.58
Gm28043-201ENSMUST00000130871 Pcgf6Q99NA9 353 aa18.51■□□□□ 0.55
Gm28043-201ENSMUST00000130871 NrdcQ8BHG1 1161 aa18.49■□□□□ 0.55
Gm28043-201ENSMUST00000130871 Anp32bQ9EST5 272 aaKnown RBP18.48■□□□□ 0.55
Gm28043-201ENSMUST00000130871 Fam50aQ9WV03 339 aaKnown RBP18.47■□□□□ 0.55
Gm28043-201ENSMUST00000130871 Ccdc180J3QNE4 1664 aa18.47■□□□□ 0.55
Gm28043-201ENSMUST00000130871 Nop58Q6DFW4 536 aaKnown RBP18.43■□□□□ 0.54
Gm28043-201ENSMUST00000130871 NclP09405 707 aaKnown RBP18.42■□□□□ 0.54
Gm28043-201ENSMUST00000130871 Tnnt3Q9QZ47 272 aa18.42■□□□□ 0.54
Gm28043-201ENSMUST00000130871 Neurod1Q60867 357 aa18.41■□□□□ 0.54
Gm28043-201ENSMUST00000130871 Ap3b1Q9Z1T1 1105 aa18.37■□□□□ 0.53
Gm28043-201ENSMUST00000130871 Ttbk1Q6PCN3 1308 aa18.36■□□□□ 0.53
Gm28043-201ENSMUST00000130871 NeflP08551 543 aa18.32■□□□□ 0.52
Gm28043-201ENSMUST00000130871 4933416C03RikQ3V063 378 aa18.3■□□□□ 0.52
Gm28043-201ENSMUST00000130871 Myt1Q8CFC2 1127 aa18.3■□□□□ 0.52
Gm28043-201ENSMUST00000130871 4930567H17RikQ3V0K5 233 aa18.3■□□□□ 0.52
Gm28043-201ENSMUST00000130871 Ppargc1bQ8VHJ7 1014 aa18.28■□□□□ 0.52
Gm28043-201ENSMUST00000130871 Eif5bQ05D44 1216 aaKnown RBP18.27■□□□□ 0.52
Gm28043-201ENSMUST00000130871 Os9Q8K2C7 672 aa18.24■□□□□ 0.51
Gm28043-201ENSMUST00000130871 Zcchc6Q5BLK4 1491 aaKnown RBP18.21■□□□□ 0.51
Gm28043-201ENSMUST00000130871 TonslQ6NZL6 1363 aa18.19■□□□□ 0.5
Gm28043-201ENSMUST00000130871 Supt5hO55201 1082 aaKnown RBP18.16■□□□□ 0.5
Gm28043-201ENSMUST00000130871 Rtl1Q7M732 1744 aa18.07■□□□□ 0.48
Gm28043-201ENSMUST00000130871 Mier1Q5UAK0 511 aa18.03■□□□□ 0.48
Gm28043-201ENSMUST00000130871 Abcc9P70170 1546 aa17.95■□□□□ 0.46
Gm28043-201ENSMUST00000130871 Rtl5Q5DTT4 599 aa17.93■□□□□ 0.46
Gm28043-201ENSMUST00000130871 Lmod2Q3UHZ5 550 aa17.88■□□□□ 0.45
Gm28043-201ENSMUST00000130871 Zbtb7cQ8VCZ7 619 aa17.85■□□□□ 0.45
Gm28043-201ENSMUST00000130871 Npm1Q61937 292 aaKnown RBP17.83■□□□□ 0.44
Gm28043-201ENSMUST00000130871 Plekhg3Q4VAC9 1341 aa17.82■□□□□ 0.44
Gm28043-201ENSMUST00000130871 ClspnQ80YR7 1315 aa17.82■□□□□ 0.44
Gm28043-201ENSMUST00000130871 Gm35339A0A140LHH9 1649 aa17.79■□□□□ 0.44
Gm28043-201ENSMUST00000130871 Hnrnpul2Q00PI9 745 aaKnown RBP17.79■□□□□ 0.44
Gm28043-201ENSMUST00000130871 Anp32aO35381 247 aa17.71■□□□□ 0.43
Gm28043-201ENSMUST00000130871 Gm13697A2AK42 830 aa17.64■□□□□ 0.41
Gm28043-201ENSMUST00000130871 DaxxO35613 739 aa17.64■□□□□ 0.41
Gm28043-201ENSMUST00000130871 Zbtb4Q5F293 982 aa17.64■□□□□ 0.41
Gm28043-201ENSMUST00000130871 Eid3Q3V124 375 aa17.6■□□□□ 0.41
Gm28043-201ENSMUST00000130871 Mapk8ip2Q9ERE9 830 aa17.59■□□□□ 0.41
Gm28043-201ENSMUST00000130871 Chic1Q8CBW7 227 aa17.59■□□□□ 0.41
Gm28043-201ENSMUST00000130871 Nlrp6Q91WS2 869 aa17.58■□□□□ 0.4
Gm28043-201ENSMUST00000130871 Erich6D3Z6S9 713 aa17.56■□□□□ 0.4
Gm28043-201ENSMUST00000130871 Ifnlr1Q8CGK5 535 aa17.55■□□□□ 0.4
Gm28043-201ENSMUST00000130871 Atp1b4Q99ME6 356 aa17.52■□□□□ 0.39
Gm28043-201ENSMUST00000130871 Prdm10Q3UTQ7 1184 aa17.49■□□□□ 0.39
Gm28043-201ENSMUST00000130871 Polr3glQ8R0C0 218 aa17.49■□□□□ 0.39
Gm28043-201ENSMUST00000130871 Sall2Q9QX96 1004 aa17.47■□□□□ 0.39
Gm28043-201ENSMUST00000130871 Hdac5Q9Z2V6 1113 aa17.47■□□□□ 0.39
Gm28043-201ENSMUST00000130871 Clip1Q922J3 1391 aa17.46■□□□□ 0.39
Gm28043-201ENSMUST00000130871 Ccer2J3QPU5 274 aa17.42■□□□□ 0.38
Gm28043-201ENSMUST00000130871 Anks4bQ8K3X6 423 aa17.41■□□□□ 0.38
Gm28043-201ENSMUST00000130871 DiexfQ8BTT6 772 aaKnown RBP17.4■□□□□ 0.38
Gm28043-201ENSMUST00000130871 Gm38655A0A286YDK6 273 aa17.39■□□□□ 0.37
Gm28043-201ENSMUST00000130871 Fkbp15Q6P9Q6 1216 aaKnown RBP17.39■□□□□ 0.37
Gm28043-201ENSMUST00000130871 Gm13695A2AK44 830 aa17.36■□□□□ 0.37
Gm28043-201ENSMUST00000130871 ArxO35085 564 aa17.36■□□□□ 0.37
Gm28043-201ENSMUST00000130871 Csrnp3P59055 597 aa17.35■□□□□ 0.37
Gm28043-201ENSMUST00000130871 Brd4Q9ESU6 1400 aaKnown RBP17.33■□□□□ 0.37
Gm28043-201ENSMUST00000130871 Cep164Q5DU05 1446 aa17.29■□□□□ 0.36
Gm28043-201ENSMUST00000130871 Calr4Q3TQS0 420 aa17.28■□□□□ 0.36
Gm28043-201ENSMUST00000130871 Aplp2Q06335 707 aa17.27■□□□□ 0.36
Gm28043-201ENSMUST00000130871 Upf2A2AT37 1269 aaKnown RBP17.27■□□□□ 0.35
Gm28043-201ENSMUST00000130871 Ppp4r2Q0VGB7 417 aa17.25■□□□□ 0.35
Gm28043-201ENSMUST00000130871 Dcaf1Q80TR8 1506 aa17.24■□□□□ 0.35
Gm28043-201ENSMUST00000130871 Abcc8B2RUS7 1588 aa17.21■□□□□ 0.35
Gm28043-201ENSMUST00000130871 Mrs2Q5NCE8 434 aa17.2■□□□□ 0.34
Gm28043-201ENSMUST00000130871 Chic2Q9D9G3 165 aa17.19■□□□□ 0.34
Gm28043-201ENSMUST00000130871 Rad21Q61550 635 aaKnown RBP17.18■□□□□ 0.34
Gm28043-201ENSMUST00000130871 Rangap1P46061 589 aaKnown RBP17.16■□□□□ 0.34
Gm28043-201ENSMUST00000130871 Wdr43Q6ZQL4 677 aaKnown RBP17.14■□□□□ 0.33
Gm28043-201ENSMUST00000130871 Ubl4bQ9CQ84 188 aa17.11■□□□□ 0.33
Gm28043-201ENSMUST00000130871 Clstn2Q9ER65 966 aa17.11■□□□□ 0.33
Gm28043-201ENSMUST00000130871 BlmO88700 1416 aa17.1■□□□□ 0.33
Gm28043-201ENSMUST00000130871 Plppr3Q7TPB0 716 aa17.07■□□□□ 0.32
Gm28043-201ENSMUST00000130871 CatipB9EKE5 520 aa16.95■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 151.5 ms