RNA–Protein interactions for RNA: ENSMUST00000108910.9

Scn8a-205, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Scn8a, Length 11,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-205ENSMUST00000108910 DekQ7TNV0 380 aaKnown RBP8.95□□□□□ -0.98
Scn8a-205ENSMUST00000108910 Clstn2Q9ER65 966 aa8.94□□□□□ -0.98
Scn8a-205ENSMUST00000108910 Vsig10D3YX43 558 aa8.93□□□□□ -0.98
Scn8a-205ENSMUST00000108910 Hsp90aa1P07901 733 aaKnown RBP8.92□□□□□ -0.98
Scn8a-205ENSMUST00000108910 Setd5Q5XJV7 1441 aa8.92□□□□□ -0.98
Scn8a-205ENSMUST00000108910 Trim26Q99PN3 545 aa8.92□□□□□ -0.98
Scn8a-205ENSMUST00000108910 Fgd1P52734 960 aa8.91□□□□□ -0.98
Scn8a-205ENSMUST00000108910 Rgl3Q3UYI5 709 aa8.91□□□□□ -0.98
Scn8a-205ENSMUST00000108910 Ythdc1E9Q5K9 736 aaKnown RBP8.9□□□□□ -0.98
Scn8a-205ENSMUST00000108910 P3h3Q8CG70 732 aa8.89□□□□□ -0.99
Scn8a-205ENSMUST00000108910 Safb2Q80YR5 991 aaKnown RBP8.89□□□□□ -0.99
Scn8a-205ENSMUST00000108910 Hsp90ab1P11499 724 aaKnown RBP8.87□□□□□ -0.99
Scn8a-205ENSMUST00000108910 CanxP35564 591 aaKnown RBP8.87□□□□□ -0.99
Scn8a-205ENSMUST00000108910 Trim30dE9PWL0 497 aa8.86□□□□□ -0.99
Scn8a-205ENSMUST00000108910 Lmod3E9QA62 571 aa8.86□□□□□ -0.99
Scn8a-205ENSMUST00000108910 Aebp2Q9Z248 504 aaKnown RBP8.84□□□□□ -0.99
Scn8a-205ENSMUST00000108910 Ofd1Q80Z25 1017 aa8.84□□□□□ -0.99
Scn8a-205ENSMUST00000108910 Arid4bA2CG63 1314 aaKnown RBP8.83□□□□□ -1
Scn8a-205ENSMUST00000108910 Irx6Q9ER75 438 aa8.82□□□□□ -1
Scn8a-205ENSMUST00000108910 Trim44Q9QXA7 346 aa8.82□□□□□ -1
Scn8a-205ENSMUST00000108910 Ccdc9Q8VC31 543 aaKnown RBP8.81□□□□□ -1
Scn8a-205ENSMUST00000108910 Kdm2aP59997 1161 aa8.81□□□□□ -1
Scn8a-205ENSMUST00000108910 Grwd1Q810D6 446 aaKnown RBP8.81□□□□□ -1
Scn8a-205ENSMUST00000108910 Apbb1Q9QXJ1 710 aa8.81□□□□□ -1
Scn8a-205ENSMUST00000108910 Kif15Q6P9L6 1387 aa8.8□□□□□ -1
Scn8a-205ENSMUST00000108910 Golga3P55937 1487 aa8.8□□□□□ -1
Scn8a-205ENSMUST00000108910 Rsf1E9PWW9 1441 aaKnown RBP8.79□□□□□ -1
Scn8a-205ENSMUST00000108910 IqubQ8CDK3 788 aa8.79□□□□□ -1
Scn8a-205ENSMUST00000108910 Fam71e1A1L3C1 212 aa8.79□□□□□ -1
Scn8a-205ENSMUST00000108910 Card11Q8CIS0 1159 aa8.78□□□□□ -1
Scn8a-205ENSMUST00000108910 Eea1Q8BL66 1411 aa8.78□□□□□ -1
Scn8a-205ENSMUST00000108910 Srpk2O54781 681 aaKnown RBP8.78□□□□□ -1
Scn8a-205ENSMUST00000108910 1700123L14RikQ3V2K7 440 aa8.77□□□□□ -1
Scn8a-205ENSMUST00000108910 PtmaP26350 111 aa8.77□□□□□ -1
Scn8a-205ENSMUST00000108910 NacadQ5SWP3 1504 aa8.77□□□□□ -1.01
Scn8a-205ENSMUST00000108910 Exosc9Q9JHI7 438 aaKnown RBP8.76□□□□□ -1.01
Scn8a-205ENSMUST00000108910 Neurod2Q62414 383 aa8.76□□□□□ -1.01
Scn8a-205ENSMUST00000108910 Mroh3A0A1D5RM54 893 aa8.75□□□□□ -1.01
Scn8a-205ENSMUST00000108910 Plcb2A3KGF7 1181 aa8.75□□□□□ -1.01
Scn8a-205ENSMUST00000108910 Ccdc18Q640L5 1455 aa8.75□□□□□ -1.01
Scn8a-205ENSMUST00000108910 Baz1aO88379 1555 aa8.75□□□□□ -1.01
Scn8a-205ENSMUST00000108910 Mapk8ip3Q9ESN9 1337 aa8.75□□□□□ -1.01
Scn8a-205ENSMUST00000108910 Mtus2Q3UHD3 1353 aa8.74□□□□□ -1.01
Scn8a-205ENSMUST00000108910 Arhgap27A2AB59 869 aa8.73□□□□□ -1.01
Scn8a-205ENSMUST00000108910 Cwc22Q8C5N3 908 aaKnown RBP8.73□□□□□ -1.01
Scn8a-205ENSMUST00000108910 Gm20521D3Z5F7 333 aa8.73□□□□□ -1.01
Scn8a-205ENSMUST00000108910 Znf326O88291 580 aa8.72□□□□□ -1.01
Scn8a-205ENSMUST00000108910 Ercc6F8VPZ5 1481 aa8.72□□□□□ -1.01
Scn8a-205ENSMUST00000108910 Htatsf1Q8BGC0 757 aa8.72□□□□□ -1.01
Scn8a-205ENSMUST00000108910 Armcx1Q9CX83 456 aa8.71□□□□□ -1.02
Scn8a-205ENSMUST00000108910 Dbr1Q923B1 550 aa8.71□□□□□ -1.02
Scn8a-205ENSMUST00000108910 Rrp7aQ9D1C9 280 aaKnown RBP8.71□□□□□ -1.02
Scn8a-205ENSMUST00000108910 Gm6268A2A3U9 297 aa8.7□□□□□ -1.02
Scn8a-205ENSMUST00000108910 Ccdc27Q3V036 639 aa8.7□□□□□ -1.02
Scn8a-205ENSMUST00000108910 Stag3O70576 1240 aa8.69□□□□□ -1.02
Scn8a-205ENSMUST00000108910 Ppm1gQ61074 542 aa8.69□□□□□ -1.02
Scn8a-205ENSMUST00000108910 Stk24Q99KH8 431 aa8.68□□□□□ -1.02
Scn8a-205ENSMUST00000108910 NgefQ8CHT1 710 aa8.68□□□□□ -1.02
Scn8a-205ENSMUST00000108910 Mia2Q91ZV0 1396 aa8.68□□□□□ -1.02
Scn8a-205ENSMUST00000108910 B4galnt3Q6L8S8 986 aa8.68□□□□□ -1.02
Scn8a-205ENSMUST00000108910 Map7O88735 730 aa8.68□□□□□ -1.02
Scn8a-205ENSMUST00000108910 1700019A02RikA0A087WPV9 146 aa8.67□□□□□ -1.02
Scn8a-205ENSMUST00000108910 Rtn4Q99P72 1162 aaKnown RBP8.67□□□□□ -1.02
Scn8a-205ENSMUST00000108910 Cnga1P29974 684 aa8.66□□□□□ -1.02
Scn8a-205ENSMUST00000108910 Chmp4bQ9D8B3 224 aaKnown RBP8.66□□□□□ -1.02
Scn8a-205ENSMUST00000108910 NudcO35685 332 aaKnown RBP8.65□□□□□ -1.03
Scn8a-205ENSMUST00000108910 SafbD3YXK2 937 aaKnown RBP8.64□□□□□ -1.03
Scn8a-205ENSMUST00000108910 Hspa5P20029 655 aaKnown RBP8.64□□□□□ -1.03
Scn8a-205ENSMUST00000108910 Iqcf3Q9D498 203 aa8.64□□□□□ -1.03
Scn8a-205ENSMUST00000108910 Spryd3E9Q9B3 442 aa8.64□□□□□ -1.03
Scn8a-205ENSMUST00000108910 Hsp90b1P08113 802 aaKnown RBP8.64□□□□□ -1.03
Scn8a-205ENSMUST00000108910 Clstn1Q9EPL2 979 aa8.63□□□□□ -1.03
Scn8a-205ENSMUST00000108910 Pes1Q9EQ61 584 aaKnown RBP8.63□□□□□ -1.03
Scn8a-205ENSMUST00000108910 PnnO35691 725 aaKnown RBP8.63□□□□□ -1.03
Scn8a-205ENSMUST00000108910 Casc1Q6TDU8 730 aa8.63□□□□□ -1.03
Scn8a-205ENSMUST00000108910 Slc4a3P16283 1227 aa8.62□□□□□ -1.03
Scn8a-205ENSMUST00000108910 Wwc2Q6NXJ0 1187 aa8.61□□□□□ -1.03
Scn8a-205ENSMUST00000108910 Rwdd1Q9CQK7 243 aa8.6□□□□□ -1.03
Scn8a-205ENSMUST00000108910 Fhad1A6PWD2 1420 aa8.6□□□□□ -1.03
Scn8a-205ENSMUST00000108910 Mbd3Q9Z2D8 285 aaKnown RBP8.6□□□□□ -1.03
Scn8a-205ENSMUST00000108910 KnstrnQ9D9Z1 312 aaKnown RBP8.6□□□□□ -1.03
Scn8a-205ENSMUST00000108910 MyclP10166 368 aa8.59□□□□□ -1.03
Scn8a-205ENSMUST00000108910 Zfp777B9EKF4 885 aa8.58□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Pkd2O35245 966 aa8.58□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Rundc1Q0VDN7 615 aa8.58□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Sh3bp5Q9Z131 463 aa8.57□□□□□ -1.04
Scn8a-205ENSMUST00000108910 MccE9PWI3 1003 aa8.57□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Kif27Q7M6Z4 1394 aa8.57□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Map4P27546 1125 aaKnown RBP8.57□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Adam1bQ8R534 806 aa8.57□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Supt16hQ920B9 1047 aa8.56□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Tcerg1Q8CGF7 1100 aaKnown RBP8.56□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Speer4f1Q9D5Q6 258 aa8.56□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Irx3P81067 507 aa8.55□□□□□ -1.04
Scn8a-205ENSMUST00000108910 HnrnpuQ8VEK3 800 aaKnown RBP8.55□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Exoc6Q8R313 802 aa8.55□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Rassf8Q8CJ96 419 aa8.55□□□□□ -1.04
Scn8a-205ENSMUST00000108910 U2surpQ6NV83 1029 aaKnown RBP8.55□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Chmp5Q9D7S9 219 aa8.55□□□□□ -1.04
Scn8a-205ENSMUST00000108910 Tmf1B9EKI3 1091 aa8.54□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms