RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Ccdc18Q640L5 1455 aa16.23■□□□□ 0.19
Col8a1-201ENSMUST00000089332 Kdm5dQ62240 1548 aa16.22■□□□□ 0.19
Col8a1-201ENSMUST00000089332 Mrs2Q5NCE8 434 aa16.2■□□□□ 0.18
Col8a1-201ENSMUST00000089332 P3h3Q8CG70 732 aa16.19■□□□□ 0.18
Col8a1-201ENSMUST00000089332 Rad21Q61550 635 aaKnown RBP16.18■□□□□ 0.18
Col8a1-201ENSMUST00000089332 ArxO35085 564 aa16.15■□□□□ 0.18
Col8a1-201ENSMUST00000089332 Rangap1P46061 589 aaKnown RBP16.15■□□□□ 0.18
Col8a1-201ENSMUST00000089332 Rgl3Q3UYI5 709 aa16.14■□□□□ 0.17
Col8a1-201ENSMUST00000089332 Arhgap27A2AB59 869 aa16.13■□□□□ 0.17
Col8a1-201ENSMUST00000089332 Calr4Q3TQS0 420 aa16.12■□□□□ 0.17
Col8a1-201ENSMUST00000089332 Aplp2Q06335 707 aa16.12■□□□□ 0.17
Col8a1-201ENSMUST00000089332 Eea1Q8BL66 1411 aa16.12■□□□□ 0.17
Col8a1-201ENSMUST00000089332 Aebp2Q9Z248 504 aaKnown RBP16.11■□□□□ 0.17
Col8a1-201ENSMUST00000089332 IqubQ8CDK3 788 aa16.09■□□□□ 0.17
Col8a1-201ENSMUST00000089332 Fgd1P52734 960 aa16.07■□□□□ 0.16
Col8a1-201ENSMUST00000089332 Ppp4r2Q0VGB7 417 aa16.04■□□□□ 0.16
Col8a1-201ENSMUST00000089332 Srpk2O54781 681 aaKnown RBP16.03■□□□□ 0.16
Col8a1-201ENSMUST00000089332 Mroh3A0A1D5RM54 893 aa16.02■□□□□ 0.15
Col8a1-201ENSMUST00000089332 Kdm2aP59997 1161 aa16■□□□□ 0.15
Col8a1-201ENSMUST00000089332 Mtus2Q3UHD3 1353 aa15.99■□□□□ 0.15
Col8a1-201ENSMUST00000089332 Wdr43Q6ZQL4 677 aaKnown RBP15.98■□□□□ 0.15
Col8a1-201ENSMUST00000089332 Rrp7aQ9D1C9 280 aaKnown RBP15.97■□□□□ 0.15
Col8a1-201ENSMUST00000089332 Grwd1Q810D6 446 aaKnown RBP15.96■□□□□ 0.15
Col8a1-201ENSMUST00000089332 Gm20521D3Z5F7 333 aa15.96■□□□□ 0.14
Col8a1-201ENSMUST00000089332 Ccdc88bQ4QRL3 1481 aa15.95■□□□□ 0.14
Col8a1-201ENSMUST00000089332 Exosc9Q9JHI7 438 aaKnown RBP15.95■□□□□ 0.14
Col8a1-201ENSMUST00000089332 Cwc22Q8C5N3 908 aaKnown RBP15.95■□□□□ 0.14
Col8a1-201ENSMUST00000089332 Card11Q8CIS0 1159 aa15.95■□□□□ 0.14
Col8a1-201ENSMUST00000089332 Trim26Q99PN3 545 aa15.93■□□□□ 0.14
Col8a1-201ENSMUST00000089332 Hsp90aa1P07901 733 aaKnown RBP15.93■□□□□ 0.14
Col8a1-201ENSMUST00000089332 Pds5bQ4VA53 1446 aaKnown RBP15.91■□□□□ 0.14
Col8a1-201ENSMUST00000089332 Mia2Q91ZV0 1396 aa15.9■□□□□ 0.14
Col8a1-201ENSMUST00000089332 Zfp777B9EKF4 885 aa15.88■□□□□ 0.13
Col8a1-201ENSMUST00000089332 Ofd1Q80Z25 1017 aa15.87■□□□□ 0.13
Col8a1-201ENSMUST00000089332 Mapk8ip3Q9ESN9 1337 aa15.86■□□□□ 0.13
Col8a1-201ENSMUST00000089332 Stk24Q99KH8 431 aa15.85■□□□□ 0.13
Col8a1-201ENSMUST00000089332 Irx6Q9ER75 438 aa15.85■□□□□ 0.13
Col8a1-201ENSMUST00000089332 MyclP10166 368 aa15.83■□□□□ 0.13
Col8a1-201ENSMUST00000089332 Cep162Q6ZQ06 1403 aa15.83■□□□□ 0.12
Col8a1-201ENSMUST00000089332 Stag3O70576 1240 aa15.82■□□□□ 0.12
Col8a1-201ENSMUST00000089332 Kif27Q7M6Z4 1394 aa15.8■□□□□ 0.12
Col8a1-201ENSMUST00000089332 Fmn1Q05860 1466 aa15.8■□□□□ 0.12
Col8a1-201ENSMUST00000089332 Iqcf3Q9D498 203 aa15.8■□□□□ 0.12
Col8a1-201ENSMUST00000089332 DekQ7TNV0 380 aaKnown RBP15.79■□□□□ 0.12
Col8a1-201ENSMUST00000089332 Trim30dE9PWL0 497 aa15.79■□□□□ 0.12
Col8a1-201ENSMUST00000089332 Hspa5P20029 655 aaKnown RBP15.79■□□□□ 0.12
Col8a1-201ENSMUST00000089332 1700123L14RikQ3V2K7 440 aa15.78■□□□□ 0.12
Col8a1-201ENSMUST00000089332 Sycp2Q9CUU3 1500 aa15.78■□□□□ 0.12
Col8a1-201ENSMUST00000089332 Hsp90ab1P11499 724 aaKnown RBP15.77■□□□□ 0.11
Col8a1-201ENSMUST00000089332 Chmp4bQ9D8B3 224 aaKnown RBP15.76■□□□□ 0.11
Col8a1-201ENSMUST00000089332 NgefQ8CHT1 710 aa15.76■□□□□ 0.11
Col8a1-201ENSMUST00000089332 Ppp1r18Q8BQ30 594 aa15.76■□□□□ 0.11
Col8a1-201ENSMUST00000089332 NudcO35685 332 aaKnown RBP15.73■□□□□ 0.11
Col8a1-201ENSMUST00000089332 Map4P27546 1125 aaKnown RBP15.73■□□□□ 0.11
Col8a1-201ENSMUST00000089332 CanxP35564 591 aaKnown RBP15.73■□□□□ 0.11
Col8a1-201ENSMUST00000089332 Aebp1Q640N1 1128 aa15.72■□□□□ 0.11
Col8a1-201ENSMUST00000089332 Znf326O88291 580 aa15.72■□□□□ 0.11
Col8a1-201ENSMUST00000089332 Neurod2Q62414 383 aa15.72■□□□□ 0.11
Col8a1-201ENSMUST00000089332 AknaQ80VW7 1404 aa15.7■□□□□ 0.1
Col8a1-201ENSMUST00000089332 CftrP26361 1476 aa15.7■□□□□ 0.1
Col8a1-201ENSMUST00000089332 Cecr2E9Q2Z1 1453 aa15.69■□□□□ 0.1
Col8a1-201ENSMUST00000089332 Vsig10D3YX43 558 aa15.68■□□□□ 0.1
Col8a1-201ENSMUST00000089332 Apbb1Q9QXJ1 710 aa15.68■□□□□ 0.1
Col8a1-201ENSMUST00000089332 Gm6268A2A3U9 297 aa15.67■□□□□ 0.1
Col8a1-201ENSMUST00000089332 Arid3cA6PWV5 409 aa15.67■□□□□ 0.1
Col8a1-201ENSMUST00000089332 Lemd3Q9WU40 921 aa15.66■□□□□ 0.1
Col8a1-201ENSMUST00000089332 Crybg2B7ZCC2 1516 aa15.66■□□□□ 0.1
Col8a1-201ENSMUST00000089332 CatipB9EKE5 520 aa15.66■□□□□ 0.1
Col8a1-201ENSMUST00000089332 Pkd2O35245 966 aa15.65■□□□□ 0.1
Col8a1-201ENSMUST00000089332 Fam71e1A1L3C1 212 aa15.64■□□□□ 0.09
Col8a1-201ENSMUST00000089332 Cnga1P29974 684 aa15.63■□□□□ 0.09
Col8a1-201ENSMUST00000089332 Wwc2Q6NXJ0 1187 aa15.63■□□□□ 0.09
Col8a1-201ENSMUST00000089332 Ccdc9Q8VC31 543 aaKnown RBP15.63■□□□□ 0.09
Col8a1-201ENSMUST00000089332 Rpap1Q80TE0 1409 aa15.63■□□□□ 0.09
Col8a1-201ENSMUST00000089332 Fyco1Q8VDC1 1437 aa15.63■□□□□ 0.09
Col8a1-201ENSMUST00000089332 Fhad1A6PWD2 1420 aa15.62■□□□□ 0.09
Col8a1-201ENSMUST00000089332 Map7O88735 730 aa15.62■□□□□ 0.09
Col8a1-201ENSMUST00000089332 1700019A02RikA0A087WPV9 146 aa15.61■□□□□ 0.09
Col8a1-201ENSMUST00000089332 Trim44Q9QXA7 346 aa15.61■□□□□ 0.09
Col8a1-201ENSMUST00000089332 Rtn4Q99P72 1162 aaKnown RBP15.6■□□□□ 0.09
Col8a1-201ENSMUST00000089332 Cabp1Q9JLK7 227 aa15.6■□□□□ 0.09
Col8a1-201ENSMUST00000089332 Cux2P70298 1426 aa15.6■□□□□ 0.09
Col8a1-201ENSMUST00000089332 Gtf2e1Q9D0D5 440 aa15.59■□□□□ 0.09
Col8a1-201ENSMUST00000089332 Sin3aQ60520 1274 aaKnown RBP15.58■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Dhx57Q6P5D3 1388 aaKnown RBP15.58■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Baz1bQ9Z277 1479 aa15.58■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Rundc1Q0VDN7 615 aa15.57■□□□□ 0.08
Col8a1-201ENSMUST00000089332 CntlnA2AM05 1397 aa15.57■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Htatsf1Q8BGC0 757 aa15.57■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Trak1Q6PD31 939 aa15.56■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Ppm1gQ61074 542 aa15.56■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Ifit1bl1D3Z6F0 470 aa15.55■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Smarca2Q6DIC0 1577 aa15.55■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Arid4bA2CG63 1314 aaKnown RBP15.55■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Mbd3Q9Z2D8 285 aaKnown RBP15.55■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Mphosph9A6H5Y1 991 aa15.54■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Pes1Q9EQ61 584 aaKnown RBP15.54■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Rsph4aQ8BYM7 716 aa15.54■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Rapgef2Q8CHG7 1496 aa15.54■□□□□ 0.08
Col8a1-201ENSMUST00000089332 Synj1Q8CHC4 1574 aa15.53■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms