RNA–Protein interactions for RNA: ENSMUST00000089332.4

Col8a1-201, Transcript of Collagen alpha-1(VIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col8a1, Length 5,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1-201ENSMUST00000089332 Rhox8Q6VSS7 320 aa21.68■■□□□ 1.06
Col8a1-201ENSMUST00000089332 Rpgrip1Q9EPQ2 1331 aa19.38■□□□□ 0.69
Col8a1-201ENSMUST00000089332 Esf1Q3V1V3 845 aaKnown RBP19.21■□□□□ 0.67
Col8a1-201ENSMUST00000089332 Ehmt2Q9Z148 1263 aaKnown RBP19.2■□□□□ 0.66
Col8a1-201ENSMUST00000089332 Ccdc136Q3TVA9 1136 aa19.2■□□□□ 0.66
Col8a1-201ENSMUST00000089332 NischQ80TM9 1593 aa19.14■□□□□ 0.65
Col8a1-201ENSMUST00000089332 Cngb1E1AZ71 1325 aa19.08■□□□□ 0.65
Col8a1-201ENSMUST00000089332 Trim41Q5NCC3 630 aa18.92■□□□□ 0.62
Col8a1-201ENSMUST00000089332 Zeb1Q64318 1117 aa18.85■□□□□ 0.61
Col8a1-201ENSMUST00000089332 Ube2uB1AUC4 352 aa18.78■□□□□ 0.6
Col8a1-201ENSMUST00000089332 Las1lA2BE28 776 aaKnown RBP18.77■□□□□ 0.6
Col8a1-201ENSMUST00000089332 Npm2Q80W85 207 aa18.75■□□□□ 0.59
Col8a1-201ENSMUST00000089332 Gab3Q8BSM5 595 aa18.75■□□□□ 0.59
Col8a1-201ENSMUST00000089332 Wdr66E9Q743 1299 aa18.66■□□□□ 0.58
Col8a1-201ENSMUST00000089332 Myt1lP97500 1187 aa18.52■□□□□ 0.56
Col8a1-201ENSMUST00000089332 Pelp1Q9DBD5 1123 aaKnown RBP18.27■□□□□ 0.52
Col8a1-201ENSMUST00000089332 UbtfP25976 765 aaKnown RBP18.02■□□□□ 0.48
Col8a1-201ENSMUST00000089332 NefmP08553 848 aa18.02■□□□□ 0.47
Col8a1-201ENSMUST00000089332 Acin1Q9JIX8 1338 aaKnown RBP18■□□□□ 0.47
Col8a1-201ENSMUST00000089332 Il27Q8K3I6 234 aa17.99■□□□□ 0.47
Col8a1-201ENSMUST00000089332 HrcG5E8J6 738 aa17.91■□□□□ 0.46
Col8a1-201ENSMUST00000089332 Ccdc180J3QNE4 1664 aa17.87■□□□□ 0.45
Col8a1-201ENSMUST00000089332 Abcc9P70170 1546 aa17.87■□□□□ 0.45
Col8a1-201ENSMUST00000089332 Stra8P70278 393 aa17.86■□□□□ 0.45
Col8a1-201ENSMUST00000089332 Zcchc6Q5BLK4 1491 aaKnown RBP17.79■□□□□ 0.44
Col8a1-201ENSMUST00000089332 Gm35339A0A140LHH9 1649 aa17.65■□□□□ 0.42
Col8a1-201ENSMUST00000089332 Slc24a1Q91WD8 1130 aa17.64■□□□□ 0.41
Col8a1-201ENSMUST00000089332 Rtl1Q7M732 1744 aa17.62■□□□□ 0.41
Col8a1-201ENSMUST00000089332 CenpbP27790 599 aa17.62■□□□□ 0.41
Col8a1-201ENSMUST00000089332 Fam50aQ9WV03 339 aaKnown RBP17.58■□□□□ 0.41
Col8a1-201ENSMUST00000089332 Ap3b1Q9Z1T1 1105 aa17.56■□□□□ 0.4
Col8a1-201ENSMUST00000089332 Anp32bQ9EST5 272 aaKnown RBP17.54■□□□□ 0.4
Col8a1-201ENSMUST00000089332 Abcc8B2RUS7 1588 aa17.49■□□□□ 0.39
Col8a1-201ENSMUST00000089332 NrdcQ8BHG1 1161 aa17.43■□□□□ 0.38
Col8a1-201ENSMUST00000089332 Os9Q8K2C7 672 aa17.43■□□□□ 0.38
Col8a1-201ENSMUST00000089332 Neurod1Q60867 357 aa17.42■□□□□ 0.38
Col8a1-201ENSMUST00000089332 NclP09405 707 aaKnown RBP17.41■□□□□ 0.38
Col8a1-201ENSMUST00000089332 Cdk11bP24788 784 aaKnown RBP17.38■□□□□ 0.37
Col8a1-201ENSMUST00000089332 Npm1Q61937 292 aaKnown RBP17.36■□□□□ 0.37
Col8a1-201ENSMUST00000089332 Pcgf6Q99NA9 353 aa17.35■□□□□ 0.37
Col8a1-201ENSMUST00000089332 Amer1Q7TS75 1132 aa17.29■□□□□ 0.36
Col8a1-201ENSMUST00000089332 Ppargc1bQ8VHJ7 1014 aa17.24■□□□□ 0.35
Col8a1-201ENSMUST00000089332 NeflP08551 543 aa17.22■□□□□ 0.35
Col8a1-201ENSMUST00000089332 Tnnt3Q9QZ47 272 aa17.22■□□□□ 0.35
Col8a1-201ENSMUST00000089332 TonslQ6NZL6 1363 aa17.19■□□□□ 0.34
Col8a1-201ENSMUST00000089332 Nop58Q6DFW4 536 aaKnown RBP17.17■□□□□ 0.34
Col8a1-201ENSMUST00000089332 Mier1Q5UAK0 511 aa17.15■□□□□ 0.34
Col8a1-201ENSMUST00000089332 Supt5hO55201 1082 aaKnown RBP17.12■□□□□ 0.33
Col8a1-201ENSMUST00000089332 Lmod2Q3UHZ5 550 aa17.1■□□□□ 0.33
Col8a1-201ENSMUST00000089332 Eif5bQ05D44 1216 aaKnown RBP17.07■□□□□ 0.32
Col8a1-201ENSMUST00000089332 Plekhg3Q4VAC9 1341 aa17.04■□□□□ 0.32
Col8a1-201ENSMUST00000089332 Zbtb7cQ8VCZ7 619 aa17.04■□□□□ 0.32
Col8a1-201ENSMUST00000089332 Hnrnpul2Q00PI9 745 aaKnown RBP17.04■□□□□ 0.32
Col8a1-201ENSMUST00000089332 Gm13697A2AK42 830 aa17.03■□□□□ 0.32
Col8a1-201ENSMUST00000089332 Brd4Q9ESU6 1400 aaKnown RBP16.96■□□□□ 0.31
Col8a1-201ENSMUST00000089332 Ifnlr1Q8CGK5 535 aa16.95■□□□□ 0.3
Col8a1-201ENSMUST00000089332 Chic1Q8CBW7 227 aa16.92■□□□□ 0.3
Col8a1-201ENSMUST00000089332 Myt1Q8CFC2 1127 aa16.9■□□□□ 0.3
Col8a1-201ENSMUST00000089332 4933416C03RikQ3V063 378 aa16.89■□□□□ 0.29
Col8a1-201ENSMUST00000089332 Hdac5Q9Z2V6 1113 aa16.87■□□□□ 0.29
Col8a1-201ENSMUST00000089332 Ttbk1Q6PCN3 1308 aa16.87■□□□□ 0.29
Col8a1-201ENSMUST00000089332 Rb1cc1Q9ESK9 1588 aa16.83■□□□□ 0.28
Col8a1-201ENSMUST00000089332 Erich6D3Z6S9 713 aa16.82■□□□□ 0.28
Col8a1-201ENSMUST00000089332 4930567H17RikQ3V0K5 233 aa16.82■□□□□ 0.28
Col8a1-201ENSMUST00000089332 Atp1b4Q99ME6 356 aa16.8■□□□□ 0.28
Col8a1-201ENSMUST00000089332 Cep164Q5DU05 1446 aa16.79■□□□□ 0.28
Col8a1-201ENSMUST00000089332 Dcaf1Q80TR8 1506 aa16.79■□□□□ 0.28
Col8a1-201ENSMUST00000089332 Fkbp15Q6P9Q6 1216 aaKnown RBP16.78■□□□□ 0.28
Col8a1-201ENSMUST00000089332 Ubl4bQ9CQ84 188 aa16.78■□□□□ 0.28
Col8a1-201ENSMUST00000089332 Clip1Q922J3 1391 aa16.77■□□□□ 0.27
Col8a1-201ENSMUST00000089332 Eid3Q3V124 375 aa16.75■□□□□ 0.27
Col8a1-201ENSMUST00000089332 ClspnQ80YR7 1315 aa16.74■□□□□ 0.27
Col8a1-201ENSMUST00000089332 Gm13695A2AK44 830 aa16.73■□□□□ 0.27
Col8a1-201ENSMUST00000089332 Nlrp6Q91WS2 869 aa16.71■□□□□ 0.27
Col8a1-201ENSMUST00000089332 Zbtb4Q5F293 982 aa16.71■□□□□ 0.26
Col8a1-201ENSMUST00000089332 Ccer2J3QPU5 274 aa16.69■□□□□ 0.26
Col8a1-201ENSMUST00000089332 Mapk8ip2Q9ERE9 830 aa16.64■□□□□ 0.25
Col8a1-201ENSMUST00000089332 Rtl5Q5DTT4 599 aa16.63■□□□□ 0.25
Col8a1-201ENSMUST00000089332 Prdm10Q3UTQ7 1184 aa16.57■□□□□ 0.24
Col8a1-201ENSMUST00000089332 NacadQ5SWP3 1504 aa16.56■□□□□ 0.24
Col8a1-201ENSMUST00000089332 Sall2Q9QX96 1004 aa16.55■□□□□ 0.24
Col8a1-201ENSMUST00000089332 Plppr3Q7TPB0 716 aa16.52■□□□□ 0.24
Col8a1-201ENSMUST00000089332 Clstn2Q9ER65 966 aa16.51■□□□□ 0.23
Col8a1-201ENSMUST00000089332 Polr3glQ8R0C0 218 aa16.5■□□□□ 0.23
Col8a1-201ENSMUST00000089332 Anp32aO35381 247 aa16.45■□□□□ 0.22
Col8a1-201ENSMUST00000089332 Chic2Q9D9G3 165 aa16.43■□□□□ 0.22
Col8a1-201ENSMUST00000089332 Baz1aO88379 1555 aa16.43■□□□□ 0.22
Col8a1-201ENSMUST00000089332 BlmO88700 1416 aa16.43■□□□□ 0.22
Col8a1-201ENSMUST00000089332 DiexfQ8BTT6 772 aaKnown RBP16.39■□□□□ 0.21
Col8a1-201ENSMUST00000089332 Safb2Q80YR5 991 aaKnown RBP16.37■□□□□ 0.21
Col8a1-201ENSMUST00000089332 Rsf1E9PWW9 1441 aaKnown RBP16.35■□□□□ 0.21
Col8a1-201ENSMUST00000089332 Golga3P55937 1487 aa16.35■□□□□ 0.21
Col8a1-201ENSMUST00000089332 Setd5Q5XJV7 1441 aa16.35■□□□□ 0.21
Col8a1-201ENSMUST00000089332 Kif15Q6P9L6 1387 aa16.32■□□□□ 0.2
Col8a1-201ENSMUST00000089332 Upf2A2AT37 1269 aaKnown RBP16.32■□□□□ 0.2
Col8a1-201ENSMUST00000089332 DaxxO35613 739 aa16.29■□□□□ 0.2
Col8a1-201ENSMUST00000089332 Anks4bQ8K3X6 423 aa16.28■□□□□ 0.2
Col8a1-201ENSMUST00000089332 Ercc6F8VPZ5 1481 aa16.28■□□□□ 0.2
Col8a1-201ENSMUST00000089332 Gm38655A0A286YDK6 273 aa16.28■□□□□ 0.2
Col8a1-201ENSMUST00000089332 Csrnp3P59055 597 aa16.24■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 162.2 ms