RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Trim26Q99PN3 545 aa20.73■□□□□ 0.91
Ubr3-201ENSMUST00000055758 Bcl11aQ9QYE3 773 aa20.71■□□□□ 0.91
Ubr3-201ENSMUST00000055758 Znf326O88291 580 aa20.67■□□□□ 0.9
Ubr3-201ENSMUST00000055758 Npm1Q61937 292 aaKnown RBP20.67■□□□□ 0.9
Ubr3-201ENSMUST00000055758 Tnnt2P50752 301 aa20.66■□□□□ 0.9
Ubr3-201ENSMUST00000055758 P3h3Q8CG70 732 aa20.66■□□□□ 0.9
Ubr3-201ENSMUST00000055758 Fgd1P52734 960 aa20.64■□□□□ 0.9
Ubr3-201ENSMUST00000055758 Plcb2A3KGF7 1181 aa20.62■□□□□ 0.89
Ubr3-201ENSMUST00000055758 Ccdc27Q3V036 639 aa20.62■□□□□ 0.89
Ubr3-201ENSMUST00000055758 Clip1Q922J3 1391 aa20.59■□□□□ 0.89
Ubr3-201ENSMUST00000055758 BccipQ9CWI3 316 aa20.58■□□□□ 0.89
Ubr3-201ENSMUST00000055758 Fkbp15Q6P9Q6 1216 aaKnown RBP20.58■□□□□ 0.89
Ubr3-201ENSMUST00000055758 Hdac5Q9Z2V6 1113 aa20.56■□□□□ 0.88
Ubr3-201ENSMUST00000055758 Spryd3E9Q9B3 442 aa20.56■□□□□ 0.88
Ubr3-201ENSMUST00000055758 Abcc9P70170 1546 aa20.55■□□□□ 0.88
Ubr3-201ENSMUST00000055758 Adam1bQ8R534 806 aa20.54■□□□□ 0.88
Ubr3-201ENSMUST00000055758 Plppr3Q7TPB0 716 aa20.52■□□□□ 0.87
Ubr3-201ENSMUST00000055758 Dcaf1Q80TR8 1506 aa20.51■□□□□ 0.87
Ubr3-201ENSMUST00000055758 Htatsf1Q8BGC0 757 aa20.5■□□□□ 0.87
Ubr3-201ENSMUST00000055758 Chic2Q9D9G3 165 aa20.49■□□□□ 0.87
Ubr3-201ENSMUST00000055758 Mak16Q8BGS0 296 aaKnown RBP20.47■□□□□ 0.87
Ubr3-201ENSMUST00000055758 Podxl2Q8CAE9 603 aa20.45■□□□□ 0.86
Ubr3-201ENSMUST00000055758 Apbb1Q9QXJ1 710 aa20.45■□□□□ 0.86
Ubr3-201ENSMUST00000055758 Ccer2J3QPU5 274 aa20.44■□□□□ 0.86
Ubr3-201ENSMUST00000055758 PnnO35691 725 aaKnown RBP20.43■□□□□ 0.86
Ubr3-201ENSMUST00000055758 Irx6Q9ER75 438 aa20.43■□□□□ 0.86
Ubr3-201ENSMUST00000055758 Irx3P81067 507 aa20.42■□□□□ 0.86
Ubr3-201ENSMUST00000055758 Ofd1Q80Z25 1017 aa20.42■□□□□ 0.86
Ubr3-201ENSMUST00000055758 Dbr1Q923B1 550 aa20.38■□□□□ 0.85
Ubr3-201ENSMUST00000055758 Aebp2Q9Z248 504 aaKnown RBP20.37■□□□□ 0.85
Ubr3-201ENSMUST00000055758 SetQ9EQU5 289 aaKnown RBP20.33■□□□□ 0.84
Ubr3-201ENSMUST00000055758 SafbD3YXK2 937 aaKnown RBP20.32■□□□□ 0.84
Ubr3-201ENSMUST00000055758 Clstn1Q9EPL2 979 aa20.31■□□□□ 0.84
Ubr3-201ENSMUST00000055758 Ppm1gQ61074 542 aa20.29■□□□□ 0.84
Ubr3-201ENSMUST00000055758 Erich6bQ9D4S6 220 aa20.29■□□□□ 0.84
Ubr3-201ENSMUST00000055758 Armcx1Q9CX83 456 aa20.29■□□□□ 0.84
Ubr3-201ENSMUST00000055758 Taok2Q6ZQ29 1240 aa20.28■□□□□ 0.84
Ubr3-201ENSMUST00000055758 B4galnt3Q6L8S8 986 aa20.27■□□□□ 0.84
Ubr3-201ENSMUST00000055758 Dnttip2Q8R2M2 758 aaKnown RBP20.27■□□□□ 0.84
Ubr3-201ENSMUST00000055758 Casc1Q6TDU8 730 aa20.27■□□□□ 0.84
Ubr3-201ENSMUST00000055758 Prm3Q62100 101 aa20.26■□□□□ 0.83
Ubr3-201ENSMUST00000055758 Slc4a1apE9PX68 744 aa20.25■□□□□ 0.83
Ubr3-201ENSMUST00000055758 AU015836B2RUM3 263 aa20.25■□□□□ 0.83
Ubr3-201ENSMUST00000055758 Slc4a3P16283 1227 aa20.25■□□□□ 0.83
Ubr3-201ENSMUST00000055758 Neurod2Q62414 383 aa20.25■□□□□ 0.83
Ubr3-201ENSMUST00000055758 Rgl3Q3UYI5 709 aa20.23■□□□□ 0.83
Ubr3-201ENSMUST00000055758 BlmO88700 1416 aa20.2■□□□□ 0.82
Ubr3-201ENSMUST00000055758 Cep164Q5DU05 1446 aa20.19■□□□□ 0.82
Ubr3-201ENSMUST00000055758 Calcoco2A2A6M5 331 aa20.18■□□□□ 0.82
Ubr3-201ENSMUST00000055758 Noc3lQ8VI84 807 aaKnown RBP20.12■□□□□ 0.81
Ubr3-201ENSMUST00000055758 Rtn4Q99P72 1162 aaKnown RBP20.12■□□□□ 0.81
Ubr3-201ENSMUST00000055758 Map7O88735 730 aa20.1■□□□□ 0.81
Ubr3-201ENSMUST00000055758 Pcmtd1P59913 357 aa20.1■□□□□ 0.81
Ubr3-201ENSMUST00000055758 MsnP26041 577 aaKnown RBP20.09■□□□□ 0.81
Ubr3-201ENSMUST00000055758 Pes1Q9EQ61 584 aaKnown RBP20.09■□□□□ 0.81
Ubr3-201ENSMUST00000055758 Grwd1Q810D6 446 aaKnown RBP20.08■□□□□ 0.8
Ubr3-201ENSMUST00000055758 Gm6268A2A3U9 297 aa20.08■□□□□ 0.8
Ubr3-201ENSMUST00000055758 Kdm2aP59997 1161 aa20.06■□□□□ 0.8
Ubr3-201ENSMUST00000055758 Clstn2Q9ER65 966 aa20.01■□□□□ 0.79
Ubr3-201ENSMUST00000055758 1700019A02RikA0A087WPV9 146 aa19.99■□□□□ 0.79
Ubr3-201ENSMUST00000055758 Hsp90b1P08113 802 aaKnown RBP19.99■□□□□ 0.79
Ubr3-201ENSMUST00000055758 Mapk8ip3Q9ESN9 1337 aa19.97■□□□□ 0.79
Ubr3-201ENSMUST00000055758 Wwc2Q6NXJ0 1187 aa19.96■□□□□ 0.79
Ubr3-201ENSMUST00000055758 Card11Q8CIS0 1159 aa19.96■□□□□ 0.79
Ubr3-201ENSMUST00000055758 Ftsj3Q9DBE9 838 aaKnown RBP19.95■□□□□ 0.78
Ubr3-201ENSMUST00000055758 Exosc9Q9JHI7 438 aaKnown RBP19.94■□□□□ 0.78
Ubr3-201ENSMUST00000055758 Map7d2A2AG50 781 aa19.94■□□□□ 0.78
Ubr3-201ENSMUST00000055758 Safb2Q80YR5 991 aaKnown RBP19.94■□□□□ 0.78
Ubr3-201ENSMUST00000055758 Supt16hQ920B9 1047 aa19.94■□□□□ 0.78
Ubr3-201ENSMUST00000055758 Dnai1Q8C0M8 701 aa19.93■□□□□ 0.78
Ubr3-201ENSMUST00000055758 Sh3bp5Q9Z131 463 aa19.93■□□□□ 0.78
Ubr3-201ENSMUST00000055758 Brd4Q9ESU6 1400 aaKnown RBP19.92■□□□□ 0.78
Ubr3-201ENSMUST00000055758 Gm973E9Q295 1059 aa19.91■□□□□ 0.78
Ubr3-201ENSMUST00000055758 KnstrnQ9D9Z1 312 aaKnown RBP19.91■□□□□ 0.78
Ubr3-201ENSMUST00000055758 Gpatch11Q3UFS4 262 aa19.9■□□□□ 0.78
Ubr3-201ENSMUST00000055758 IqubQ8CDK3 788 aa19.9■□□□□ 0.78
Ubr3-201ENSMUST00000055758 Tcerg1Q8CGF7 1100 aaKnown RBP19.89■□□□□ 0.77
Ubr3-201ENSMUST00000055758 MccE9PWI3 1003 aa19.89■□□□□ 0.77
Ubr3-201ENSMUST00000055758 Rrp12Q6P5B0 1295 aaKnown RBP19.89■□□□□ 0.77
Ubr3-201ENSMUST00000055758 Kiaa0754Q69ZZ9 979 aa19.89■□□□□ 0.77
Ubr3-201ENSMUST00000055758 Ipo9Q91YE6 1041 aa19.87■□□□□ 0.77
Ubr3-201ENSMUST00000055758 Anapc15P60007 132 aa19.86■□□□□ 0.77
Ubr3-201ENSMUST00000055758 Rwdd1Q9CQK7 243 aa19.86■□□□□ 0.77
Ubr3-201ENSMUST00000055758 Chmp4bQ9D8B3 224 aaKnown RBP19.86■□□□□ 0.77
Ubr3-201ENSMUST00000055758 Chmp5Q9D7S9 219 aa19.84■□□□□ 0.77
Ubr3-201ENSMUST00000055758 Cald1E9QA15 768 aaKnown RBP19.83■□□□□ 0.77
Ubr3-201ENSMUST00000055758 Srpk2O54781 681 aaKnown RBP19.83■□□□□ 0.77
Ubr3-201ENSMUST00000055758 Mroh3A0A1D5RM54 893 aa19.83■□□□□ 0.76
Ubr3-201ENSMUST00000055758 Setd5Q5XJV7 1441 aa19.82■□□□□ 0.76
Ubr3-201ENSMUST00000055758 Gm20521D3Z5F7 333 aa19.82■□□□□ 0.76
Ubr3-201ENSMUST00000055758 NgefQ8CHT1 710 aa19.81■□□□□ 0.76
Ubr3-201ENSMUST00000055758 Cwc22Q8C5N3 908 aaKnown RBP19.8■□□□□ 0.76
Ubr3-201ENSMUST00000055758 Rassf8Q8CJ96 419 aa19.8■□□□□ 0.76
Ubr3-201ENSMUST00000055758 Gtf3c3Q3TMP1 882 aa19.8■□□□□ 0.76
Ubr3-201ENSMUST00000055758 CgnP59242 1191 aa19.8■□□□□ 0.76
Ubr3-201ENSMUST00000055758 RdxP26043 583 aaKnown RBP19.79■□□□□ 0.76
Ubr3-201ENSMUST00000055758 Mbd3Q9Z2D8 285 aaKnown RBP19.78■□□□□ 0.76
Ubr3-201ENSMUST00000055758 SlkO54988 1233 aa19.77■□□□□ 0.76
Ubr3-201ENSMUST00000055758 EspnQ9ET47 871 aa19.77■□□□□ 0.76
Ubr3-201ENSMUST00000055758 Ecm2Q5FW85 670 aa19.76■□□□□ 0.75
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms