RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Rhox8Q6VSS7 320 aa27.03■■□□□ 1.92
Ubr3-201ENSMUST00000055758 Cngb1E1AZ71 1325 aa25.57■■□□□ 1.68
Ubr3-201ENSMUST00000055758 Rpgrip1Q9EPQ2 1331 aa25.51■■□□□ 1.67
Ubr3-201ENSMUST00000055758 Pelp1Q9DBD5 1123 aaKnown RBP25.41■■□□□ 1.66
Ubr3-201ENSMUST00000055758 Ehmt2Q9Z148 1263 aaKnown RBP25.34■■□□□ 1.65
Ubr3-201ENSMUST00000055758 Las1lA2BE28 776 aaKnown RBP25.25■■□□□ 1.63
Ubr3-201ENSMUST00000055758 Amer1Q7TS75 1132 aa25.11■■□□□ 1.61
Ubr3-201ENSMUST00000055758 Wdr66E9Q743 1299 aa24.73■■□□□ 1.55
Ubr3-201ENSMUST00000055758 Zeb1Q64318 1117 aa24.48■■□□□ 1.51
Ubr3-201ENSMUST00000055758 4930567H17RikQ3V0K5 233 aa24.3■■□□□ 1.48
Ubr3-201ENSMUST00000055758 Ube2uB1AUC4 352 aa24.14■■□□□ 1.45
Ubr3-201ENSMUST00000055758 CenpbP27790 599 aa23.93■■□□□ 1.42
Ubr3-201ENSMUST00000055758 Ttbk1Q6PCN3 1308 aa23.88■■□□□ 1.41
Ubr3-201ENSMUST00000055758 Ccdc136Q3TVA9 1136 aa23.85■■□□□ 1.41
Ubr3-201ENSMUST00000055758 Gab3Q8BSM5 595 aa23.72■■□□□ 1.39
Ubr3-201ENSMUST00000055758 Esf1Q3V1V3 845 aaKnown RBP23.67■■□□□ 1.38
Ubr3-201ENSMUST00000055758 Slc24a1Q91WD8 1130 aa23.48■■□□□ 1.35
Ubr3-201ENSMUST00000055758 4933416C03RikQ3V063 378 aa23.42■■□□□ 1.34
Ubr3-201ENSMUST00000055758 Npm2Q80W85 207 aa23.4■■□□□ 1.34
Ubr3-201ENSMUST00000055758 Myt1lP97500 1187 aa23.37■■□□□ 1.33
Ubr3-201ENSMUST00000055758 Acin1Q9JIX8 1338 aaKnown RBP23.3■■□□□ 1.32
Ubr3-201ENSMUST00000055758 Stra8P70278 393 aa23.23■■□□□ 1.31
Ubr3-201ENSMUST00000055758 Trim41Q5NCC3 630 aa23.15■■□□□ 1.3
Ubr3-201ENSMUST00000055758 UbtfP25976 765 aaKnown RBP23.11■■□□□ 1.29
Ubr3-201ENSMUST00000055758 NefmP08553 848 aa23.06■■□□□ 1.28
Ubr3-201ENSMUST00000055758 Myt1Q8CFC2 1127 aa22.97■■□□□ 1.27
Ubr3-201ENSMUST00000055758 Cdk11bP24788 784 aaKnown RBP22.97■■□□□ 1.27
Ubr3-201ENSMUST00000055758 Pcgf6Q99NA9 353 aa22.89■■□□□ 1.25
Ubr3-201ENSMUST00000055758 Eif5bQ05D44 1216 aaKnown RBP22.73■■□□□ 1.23
Ubr3-201ENSMUST00000055758 Ppargc1bQ8VHJ7 1014 aa22.68■■□□□ 1.22
Ubr3-201ENSMUST00000055758 Nop58Q6DFW4 536 aaKnown RBP22.65■■□□□ 1.22
Ubr3-201ENSMUST00000055758 NeflP08551 543 aa22.65■■□□□ 1.22
Ubr3-201ENSMUST00000055758 HrcG5E8J6 738 aa22.61■■□□□ 1.21
Ubr3-201ENSMUST00000055758 Tnnt3Q9QZ47 272 aa22.59■■□□□ 1.21
Ubr3-201ENSMUST00000055758 NrdcQ8BHG1 1161 aa22.58■■□□□ 1.21
Ubr3-201ENSMUST00000055758 Neurod1Q60867 357 aa22.47■■□□□ 1.19
Ubr3-201ENSMUST00000055758 DiexfQ8BTT6 772 aaKnown RBP22.46■■□□□ 1.19
Ubr3-201ENSMUST00000055758 Supt5hO55201 1082 aaKnown RBP22.41■■□□□ 1.18
Ubr3-201ENSMUST00000055758 NclP09405 707 aaKnown RBP22.41■■□□□ 1.18
Ubr3-201ENSMUST00000055758 Ccdc180J3QNE4 1664 aa22.4■■□□□ 1.18
Ubr3-201ENSMUST00000055758 Anp32bQ9EST5 272 aaKnown RBP22.35■■□□□ 1.17
Ubr3-201ENSMUST00000055758 Rtl5Q5DTT4 599 aa22.28■■□□□ 1.16
Ubr3-201ENSMUST00000055758 Fam50aQ9WV03 339 aaKnown RBP22.26■■□□□ 1.15
Ubr3-201ENSMUST00000055758 Rtl1Q7M732 1744 aa22.25■■□□□ 1.15
Ubr3-201ENSMUST00000055758 CatipB9EKE5 520 aa22.22■■□□□ 1.15
Ubr3-201ENSMUST00000055758 DaxxO35613 739 aa22.18■■□□□ 1.14
Ubr3-201ENSMUST00000055758 Ap3b1Q9Z1T1 1105 aa22.15■■□□□ 1.14
Ubr3-201ENSMUST00000055758 Os9Q8K2C7 672 aa22.12■■□□□ 1.13
Ubr3-201ENSMUST00000055758 TonslQ6NZL6 1363 aa22.04■■□□□ 1.12
Ubr3-201ENSMUST00000055758 Il27Q8K3I6 234 aa22.04■■□□□ 1.12
Ubr3-201ENSMUST00000055758 Ythdc1E9Q5K9 736 aaKnown RBP21.95■■□□□ 1.1
Ubr3-201ENSMUST00000055758 Gm38655A0A286YDK6 273 aa21.93■■□□□ 1.1
Ubr3-201ENSMUST00000055758 Anp32aO35381 247 aa21.91■■□□□ 1.1
Ubr3-201ENSMUST00000055758 NischQ80TM9 1593 aa21.91■■□□□ 1.1
Ubr3-201ENSMUST00000055758 Lmod3E9QA62 571 aa21.88■■□□□ 1.09
Ubr3-201ENSMUST00000055758 ArxO35085 564 aa21.8■■□□□ 1.08
Ubr3-201ENSMUST00000055758 Mier1Q5UAK0 511 aa21.76■■□□□ 1.07
Ubr3-201ENSMUST00000055758 Csrnp3P59055 597 aa21.69■■□□□ 1.06
Ubr3-201ENSMUST00000055758 Mapk8ip2Q9ERE9 830 aa21.64■■□□□ 1.05
Ubr3-201ENSMUST00000055758 ClspnQ80YR7 1315 aa21.61■■□□□ 1.05
Ubr3-201ENSMUST00000055758 Zbtb7cQ8VCZ7 619 aa21.61■■□□□ 1.05
Ubr3-201ENSMUST00000055758 Chic1Q8CBW7 227 aa21.59■■□□□ 1.05
Ubr3-201ENSMUST00000055758 Zbtb4Q5F293 982 aa21.55■■□□□ 1.04
Ubr3-201ENSMUST00000055758 Polr3glQ8R0C0 218 aa21.54■■□□□ 1.04
Ubr3-201ENSMUST00000055758 Upf2A2AT37 1269 aaKnown RBP21.53■■□□□ 1.04
Ubr3-201ENSMUST00000055758 Prdm10Q3UTQ7 1184 aa21.41■■□□□ 1.02
Ubr3-201ENSMUST00000055758 Nlrp6Q91WS2 869 aa21.4■■□□□ 1.02
Ubr3-201ENSMUST00000055758 Ppp4r2Q0VGB7 417 aa21.37■■□□□ 1.01
Ubr3-201ENSMUST00000055758 Anks4bQ8K3X6 423 aa21.36■■□□□ 1.01
Ubr3-201ENSMUST00000055758 Hnrnpul2Q00PI9 745 aaKnown RBP21.34■■□□□ 1.01
Ubr3-201ENSMUST00000055758 Plekhg3Q4VAC9 1341 aa21.33■■□□□ 1
Ubr3-201ENSMUST00000055758 Hsp90aa1P07901 733 aaKnown RBP21.32■■□□□ 1
Ubr3-201ENSMUST00000055758 Lmod2Q3UHZ5 550 aa21.31■■□□□ 1
Ubr3-201ENSMUST00000055758 Aplp2Q06335 707 aa21.28■■□□□ 1
Ubr3-201ENSMUST00000055758 Rangap1P46061 589 aaKnown RBP21.25■□□□□ 0.99
Ubr3-201ENSMUST00000055758 Calr4Q3TQS0 420 aa21.24■□□□□ 0.99
Ubr3-201ENSMUST00000055758 Sall2Q9QX96 1004 aa21.24■□□□□ 0.99
Ubr3-201ENSMUST00000055758 Vsig10D3YX43 558 aa21.2■□□□□ 0.98
Ubr3-201ENSMUST00000055758 Eid3Q3V124 375 aa21.2■□□□□ 0.98
Ubr3-201ENSMUST00000055758 Zcchc6Q5BLK4 1491 aaKnown RBP21.18■□□□□ 0.98
Ubr3-201ENSMUST00000055758 Erich6D3Z6S9 713 aa21.16■□□□□ 0.98
Ubr3-201ENSMUST00000055758 DekQ7TNV0 380 aaKnown RBP21.16■□□□□ 0.98
Ubr3-201ENSMUST00000055758 Atp1b4Q99ME6 356 aa21.15■□□□□ 0.98
Ubr3-201ENSMUST00000055758 Trim44Q9QXA7 346 aa21.1■□□□□ 0.97
Ubr3-201ENSMUST00000055758 Gm13697A2AK42 830 aa21.1■□□□□ 0.97
Ubr3-201ENSMUST00000055758 Wdr43Q6ZQL4 677 aaKnown RBP21.03■□□□□ 0.96
Ubr3-201ENSMUST00000055758 Rad21Q61550 635 aaKnown RBP21.02■□□□□ 0.96
Ubr3-201ENSMUST00000055758 Ifnlr1Q8CGK5 535 aa20.96■□□□□ 0.95
Ubr3-201ENSMUST00000055758 Fam71e1A1L3C1 212 aa20.94■□□□□ 0.94
Ubr3-201ENSMUST00000055758 Ccdc9Q8VC31 543 aaKnown RBP20.92■□□□□ 0.94
Ubr3-201ENSMUST00000055758 Znf316Q6PGE4 1016 aa20.91■□□□□ 0.94
Ubr3-201ENSMUST00000055758 CanxP35564 591 aaKnown RBP20.83■□□□□ 0.93
Ubr3-201ENSMUST00000055758 Arid4bA2CG63 1314 aaKnown RBP20.82■□□□□ 0.92
Ubr3-201ENSMUST00000055758 1700123L14RikQ3V2K7 440 aa20.81■□□□□ 0.92
Ubr3-201ENSMUST00000055758 Gm35339A0A140LHH9 1649 aa20.81■□□□□ 0.92
Ubr3-201ENSMUST00000055758 Gm13695A2AK44 830 aa20.8■□□□□ 0.92
Ubr3-201ENSMUST00000055758 Hsp90ab1P11499 724 aaKnown RBP20.78■□□□□ 0.92
Ubr3-201ENSMUST00000055758 Mrs2Q5NCE8 434 aa20.76■□□□□ 0.91
Ubr3-201ENSMUST00000055758 PtmaP26350 111 aa20.75■□□□□ 0.91
Ubr3-201ENSMUST00000055758 Trim30dE9PWL0 497 aa20.74■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms