RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Rtn4Q99P72 1162 aaKnown RBP19.05■□□□□ 0.64
Col4a1-201ENSMUST00000033898 Znf326O88291 580 aa19.04■□□□□ 0.64
Col4a1-201ENSMUST00000033898 Ubl4bQ9CQ84 188 aa19.04■□□□□ 0.64
Col4a1-201ENSMUST00000033898 Clstn1Q9EPL2 979 aa19.03■□□□□ 0.64
Col4a1-201ENSMUST00000033898 Wdr43Q6ZQL4 677 aaKnown RBP19■□□□□ 0.63
Col4a1-201ENSMUST00000033898 Apbb1Q9QXJ1 710 aa18.98■□□□□ 0.63
Col4a1-201ENSMUST00000033898 Hsp90ab1P11499 724 aaKnown RBP18.98■□□□□ 0.63
Col4a1-201ENSMUST00000033898 Anks4bQ8K3X6 423 aa18.97■□□□□ 0.63
Col4a1-201ENSMUST00000033898 Trim30dE9PWL0 497 aa18.96■□□□□ 0.63
Col4a1-201ENSMUST00000033898 Rgl3Q3UYI5 709 aa18.95■□□□□ 0.62
Col4a1-201ENSMUST00000033898 Trim44Q9QXA7 346 aa18.94■□□□□ 0.62
Col4a1-201ENSMUST00000033898 NgefQ8CHT1 710 aa18.92■□□□□ 0.62
Col4a1-201ENSMUST00000033898 Kdm2aP59997 1161 aa18.91■□□□□ 0.62
Col4a1-201ENSMUST00000033898 PtmaP26350 111 aa18.91■□□□□ 0.62
Col4a1-201ENSMUST00000033898 CanxP35564 591 aaKnown RBP18.9■□□□□ 0.62
Col4a1-201ENSMUST00000033898 BlmO88700 1416 aa18.89■□□□□ 0.61
Col4a1-201ENSMUST00000033898 Ccer2J3QPU5 274 aa18.86■□□□□ 0.61
Col4a1-201ENSMUST00000033898 Neurod2Q62414 383 aa18.85■□□□□ 0.61
Col4a1-201ENSMUST00000033898 Grwd1Q810D6 446 aaKnown RBP18.83■□□□□ 0.6
Col4a1-201ENSMUST00000033898 Armcx1Q9CX83 456 aa18.82■□□□□ 0.6
Col4a1-201ENSMUST00000033898 Plcb2A3KGF7 1181 aa18.81■□□□□ 0.6
Col4a1-201ENSMUST00000033898 Aplp2Q06335 707 aa18.81■□□□□ 0.6
Col4a1-201ENSMUST00000033898 MyclP10166 368 aa18.8■□□□□ 0.6
Col4a1-201ENSMUST00000033898 Clstn2Q9ER65 966 aa18.79■□□□□ 0.6
Col4a1-201ENSMUST00000033898 1700019A02RikA0A087WPV9 146 aa18.76■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Ecm2Q5FW85 670 aa18.76■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Dbr1Q923B1 550 aa18.76■□□□□ 0.59
Col4a1-201ENSMUST00000033898 IqubQ8CDK3 788 aa18.75■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Exosc9Q9JHI7 438 aaKnown RBP18.75■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Gm6268A2A3U9 297 aa18.75■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Ofd1Q80Z25 1017 aa18.74■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Spryd3E9Q9B3 442 aa18.72■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Brd4Q9ESU6 1400 aaKnown RBP18.72■□□□□ 0.59
Col4a1-201ENSMUST00000033898 Srpk2O54781 681 aaKnown RBP18.7■□□□□ 0.58
Col4a1-201ENSMUST00000033898 Gm20521D3Z5F7 333 aa18.67■□□□□ 0.58
Col4a1-201ENSMUST00000033898 PnnO35691 725 aaKnown RBP18.67■□□□□ 0.58
Col4a1-201ENSMUST00000033898 Stk24Q99KH8 431 aa18.66■□□□□ 0.58
Col4a1-201ENSMUST00000033898 Cnga1P29974 684 aa18.65■□□□□ 0.58
Col4a1-201ENSMUST00000033898 Pes1Q9EQ61 584 aaKnown RBP18.65■□□□□ 0.58
Col4a1-201ENSMUST00000033898 Fam71e1A1L3C1 212 aa18.64■□□□□ 0.57
Col4a1-201ENSMUST00000033898 Mapk8ip3Q9ESN9 1337 aa18.64■□□□□ 0.57
Col4a1-201ENSMUST00000033898 Mroh3A0A1D5RM54 893 aa18.63■□□□□ 0.57
Col4a1-201ENSMUST00000033898 Arhgap27A2AB59 869 aa18.6■□□□□ 0.57
Col4a1-201ENSMUST00000033898 B4galnt3Q6L8S8 986 aa18.6■□□□□ 0.57
Col4a1-201ENSMUST00000033898 Stag3O70576 1240 aa18.59■□□□□ 0.57
Col4a1-201ENSMUST00000033898 Card11Q8CIS0 1159 aa18.59■□□□□ 0.57
Col4a1-201ENSMUST00000033898 Cep164Q5DU05 1446 aa18.58■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Aebp2Q9Z248 504 aaKnown RBP18.57■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Setd5Q5XJV7 1441 aa18.57■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Sh3bp5Q9Z131 463 aa18.55■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Plin1Q8CGN5 517 aa18.54■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Hsp90b1P08113 802 aaKnown RBP18.54■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Rrp7aQ9D1C9 280 aaKnown RBP18.54■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Znf316Q6PGE4 1016 aa18.52■□□□□ 0.56
Col4a1-201ENSMUST00000033898 Q8BT18 775 aa18.5■□□□□ 0.55
Col4a1-201ENSMUST00000033898 Casc1Q6TDU8 730 aa18.49■□□□□ 0.55
Col4a1-201ENSMUST00000033898 Slc4a3P16283 1227 aa18.47■□□□□ 0.55
Col4a1-201ENSMUST00000033898 Htatsf1Q8BGC0 757 aa18.45■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Dcaf1Q80TR8 1506 aa18.44■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Ggt6Q6PDE7 497 aa18.44■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Abcc8B2RUS7 1588 aa18.43■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Anapc15P60007 132 aa18.43■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Senp3Q9EP97 568 aaKnown RBP18.43■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Rassf8Q8CJ96 419 aa18.42■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Pcmtd1P59913 357 aa18.41■□□□□ 0.54
Col4a1-201ENSMUST00000033898 U2surpQ6NV83 1029 aaKnown RBP18.41■□□□□ 0.54
Col4a1-201ENSMUST00000033898 Map7O88735 730 aa18.39■□□□□ 0.53
Col4a1-201ENSMUST00000033898 Iqcf3Q9D498 203 aa18.39■□□□□ 0.53
Col4a1-201ENSMUST00000033898 Tnnt1O88346 262 aa18.38■□□□□ 0.53
Col4a1-201ENSMUST00000033898 Ccdc9Q8VC31 543 aaKnown RBP18.38■□□□□ 0.53
Col4a1-201ENSMUST00000033898 Erich6bQ9D4S6 220 aa18.36■□□□□ 0.53
Col4a1-201ENSMUST00000033898 1700123L14RikQ3V2K7 440 aa18.35■□□□□ 0.53
Col4a1-201ENSMUST00000033898 Stk26Q99JT2 416 aa18.34■□□□□ 0.53
Col4a1-201ENSMUST00000033898 Ppm1gQ61074 542 aa18.33■□□□□ 0.53
Col4a1-201ENSMUST00000033898 SafbD3YXK2 937 aaKnown RBP18.33■□□□□ 0.52
Col4a1-201ENSMUST00000033898 NudcO35685 332 aaKnown RBP18.33■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Ccdc27Q3V036 639 aa18.32■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Ppp1r18Q8BQ30 594 aa18.31■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Kif15Q6P9L6 1387 aa18.3■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Rb1cc1Q9ESK9 1588 aa18.29■□□□□ 0.52
Col4a1-201ENSMUST00000033898 MccE9PWI3 1003 aa18.28■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Sox12Q04890 314 aa18.28■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Rtf1A2AQ19 715 aaKnown RBP18.27■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Wwc2Q6NXJ0 1187 aa18.27■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Mtus2Q3UHD3 1353 aa18.27■□□□□ 0.52
Col4a1-201ENSMUST00000033898 Mical1Q8VDP3 1048 aa18.27■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Ubap1lG3UW59 384 aa18.26■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Chmp4bQ9D8B3 224 aaKnown RBP18.26■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Cwc22Q8C5N3 908 aaKnown RBP18.25■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Znf330Q922H9 316 aa18.25■□□□□ 0.51
Col4a1-201ENSMUST00000033898 CgnP59242 1191 aa18.24■□□□□ 0.51
Col4a1-201ENSMUST00000033898 KnstrnQ9D9Z1 312 aaKnown RBP18.23■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Dnttip2Q8R2M2 758 aaKnown RBP18.23■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Adam1bQ8R534 806 aa18.23■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Mak16Q8BGS0 296 aaKnown RBP18.23■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Tmco5bQ80X59 307 aa18.23■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Isy1Q69ZQ2 285 aaKnown RBP18.22■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Speer4f1Q9D5Q6 258 aa18.21■□□□□ 0.51
Col4a1-201ENSMUST00000033898 Rwdd1Q9CQK7 243 aa18.2■□□□□ 0.5
Col4a1-201ENSMUST00000033898 Cluap1Q8R3P7 413 aa18.19■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 65.5 ms