RNA–Protein interactions for RNA: ENSMUST00000033898.9

Col4a1-201, Transcript of Collagen alpha-1(IV) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col4a1, Length 6,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1-201ENSMUST00000033898 Rhox8Q6VSS7 320 aa25.5■■□□□ 1.67
Col4a1-201ENSMUST00000033898 Ehmt2Q9Z148 1263 aaKnown RBP23.45■■□□□ 1.34
Col4a1-201ENSMUST00000033898 Wdr66E9Q743 1299 aa22.78■■□□□ 1.24
Col4a1-201ENSMUST00000033898 Ube2uB1AUC4 352 aa22.73■■□□□ 1.23
Col4a1-201ENSMUST00000033898 Rpgrip1Q9EPQ2 1331 aa22.67■■□□□ 1.22
Col4a1-201ENSMUST00000033898 Cngb1E1AZ71 1325 aa22.57■■□□□ 1.2
Col4a1-201ENSMUST00000033898 Esf1Q3V1V3 845 aaKnown RBP22.52■■□□□ 1.2
Col4a1-201ENSMUST00000033898 Ccdc136Q3TVA9 1136 aa22.52■■□□□ 1.19
Col4a1-201ENSMUST00000033898 Las1lA2BE28 776 aaKnown RBP22.47■■□□□ 1.19
Col4a1-201ENSMUST00000033898 Zeb1Q64318 1117 aa22.44■■□□□ 1.18
Col4a1-201ENSMUST00000033898 Gab3Q8BSM5 595 aa22.35■■□□□ 1.17
Col4a1-201ENSMUST00000033898 Pelp1Q9DBD5 1123 aaKnown RBP22.28■■□□□ 1.16
Col4a1-201ENSMUST00000033898 Npm2Q80W85 207 aa22.14■■□□□ 1.14
Col4a1-201ENSMUST00000033898 Myt1lP97500 1187 aa22.06■■□□□ 1.12
Col4a1-201ENSMUST00000033898 Amer1Q7TS75 1132 aa21.97■■□□□ 1.11
Col4a1-201ENSMUST00000033898 Slc24a1Q91WD8 1130 aa21.75■■□□□ 1.07
Col4a1-201ENSMUST00000033898 Trim41Q5NCC3 630 aa21.6■■□□□ 1.05
Col4a1-201ENSMUST00000033898 UbtfP25976 765 aaKnown RBP21.52■■□□□ 1.04
Col4a1-201ENSMUST00000033898 CenpbP27790 599 aa21.37■■□□□ 1.01
Col4a1-201ENSMUST00000033898 Ttbk1Q6PCN3 1308 aa21.34■■□□□ 1.01
Col4a1-201ENSMUST00000033898 Il27Q8K3I6 234 aa21.16■□□□□ 0.98
Col4a1-201ENSMUST00000033898 Neurod1Q60867 357 aa21.09■□□□□ 0.97
Col4a1-201ENSMUST00000033898 Stra8P70278 393 aa21.08■□□□□ 0.97
Col4a1-201ENSMUST00000033898 Ap3b1Q9Z1T1 1105 aa21.02■□□□□ 0.96
Col4a1-201ENSMUST00000033898 Ppargc1bQ8VHJ7 1014 aa20.97■□□□□ 0.95
Col4a1-201ENSMUST00000033898 NefmP08553 848 aa20.96■□□□□ 0.95
Col4a1-201ENSMUST00000033898 4933416C03RikQ3V063 378 aa20.96■□□□□ 0.95
Col4a1-201ENSMUST00000033898 Acin1Q9JIX8 1338 aaKnown RBP20.96■□□□□ 0.95
Col4a1-201ENSMUST00000033898 Eif5bQ05D44 1216 aaKnown RBP20.96■□□□□ 0.95
Col4a1-201ENSMUST00000033898 4930567H17RikQ3V0K5 233 aa20.95■□□□□ 0.94
Col4a1-201ENSMUST00000033898 Os9Q8K2C7 672 aa20.93■□□□□ 0.94
Col4a1-201ENSMUST00000033898 Fam50aQ9WV03 339 aaKnown RBP20.87■□□□□ 0.93
Col4a1-201ENSMUST00000033898 NrdcQ8BHG1 1161 aa20.8■□□□□ 0.92
Col4a1-201ENSMUST00000033898 Cdk11bP24788 784 aaKnown RBP20.76■□□□□ 0.91
Col4a1-201ENSMUST00000033898 NclP09405 707 aaKnown RBP20.73■□□□□ 0.91
Col4a1-201ENSMUST00000033898 NeflP08551 543 aa20.7■□□□□ 0.9
Col4a1-201ENSMUST00000033898 Anp32bQ9EST5 272 aaKnown RBP20.66■□□□□ 0.9
Col4a1-201ENSMUST00000033898 Zbtb7cQ8VCZ7 619 aa20.62■□□□□ 0.89
Col4a1-201ENSMUST00000033898 NischQ80TM9 1593 aa20.57■□□□□ 0.88
Col4a1-201ENSMUST00000033898 Chic1Q8CBW7 227 aa20.54■□□□□ 0.88
Col4a1-201ENSMUST00000033898 HrcG5E8J6 738 aa20.53■□□□□ 0.88
Col4a1-201ENSMUST00000033898 Nop58Q6DFW4 536 aaKnown RBP20.5■□□□□ 0.87
Col4a1-201ENSMUST00000033898 Pcgf6Q99NA9 353 aa20.41■□□□□ 0.86
Col4a1-201ENSMUST00000033898 Zbtb4Q5F293 982 aa20.37■□□□□ 0.85
Col4a1-201ENSMUST00000033898 Ifnlr1Q8CGK5 535 aa20.36■□□□□ 0.85
Col4a1-201ENSMUST00000033898 Tnnt3Q9QZ47 272 aa20.35■□□□□ 0.85
Col4a1-201ENSMUST00000033898 Gm13697A2AK42 830 aa20.3■□□□□ 0.84
Col4a1-201ENSMUST00000033898 Hnrnpul2Q00PI9 745 aaKnown RBP20.28■□□□□ 0.84
Col4a1-201ENSMUST00000033898 Prdm10Q3UTQ7 1184 aa20.27■□□□□ 0.84
Col4a1-201ENSMUST00000033898 TonslQ6NZL6 1363 aa20.24■□□□□ 0.83
Col4a1-201ENSMUST00000033898 Supt5hO55201 1082 aaKnown RBP20.21■□□□□ 0.83
Col4a1-201ENSMUST00000033898 Lmod2Q3UHZ5 550 aa20.19■□□□□ 0.82
Col4a1-201ENSMUST00000033898 Atp1b4Q99ME6 356 aa20.17■□□□□ 0.82
Col4a1-201ENSMUST00000033898 Erich6D3Z6S9 713 aa20.13■□□□□ 0.81
Col4a1-201ENSMUST00000033898 Ccdc180J3QNE4 1664 aa20.12■□□□□ 0.81
Col4a1-201ENSMUST00000033898 Zcchc6Q5BLK4 1491 aaKnown RBP20.12■□□□□ 0.81
Col4a1-201ENSMUST00000033898 ArxO35085 564 aa20.12■□□□□ 0.81
Col4a1-201ENSMUST00000033898 Plppr3Q7TPB0 716 aa20.11■□□□□ 0.81
Col4a1-201ENSMUST00000033898 Polr3glQ8R0C0 218 aa20.11■□□□□ 0.81
Col4a1-201ENSMUST00000033898 Gm35339A0A140LHH9 1649 aa20.1■□□□□ 0.81
Col4a1-201ENSMUST00000033898 Mapk8ip2Q9ERE9 830 aa20.07■□□□□ 0.8
Col4a1-201ENSMUST00000033898 Myt1Q8CFC2 1127 aa20.05■□□□□ 0.8
Col4a1-201ENSMUST00000033898 DaxxO35613 739 aa20■□□□□ 0.79
Col4a1-201ENSMUST00000033898 Mier1Q5UAK0 511 aa20■□□□□ 0.79
Col4a1-201ENSMUST00000033898 Nlrp6Q91WS2 869 aa20■□□□□ 0.79
Col4a1-201ENSMUST00000033898 Plekhg3Q4VAC9 1341 aa19.97■□□□□ 0.79
Col4a1-201ENSMUST00000033898 Rangap1P46061 589 aaKnown RBP19.95■□□□□ 0.78
Col4a1-201ENSMUST00000033898 Abcc9P70170 1546 aa19.95■□□□□ 0.78
Col4a1-201ENSMUST00000033898 Gm13695A2AK44 830 aa19.92■□□□□ 0.78
Col4a1-201ENSMUST00000033898 Gm38655A0A286YDK6 273 aa19.89■□□□□ 0.77
Col4a1-201ENSMUST00000033898 Fkbp15Q6P9Q6 1216 aaKnown RBP19.86■□□□□ 0.77
Col4a1-201ENSMUST00000033898 Csrnp3P59055 597 aa19.86■□□□□ 0.77
Col4a1-201ENSMUST00000033898 Npm1Q61937 292 aaKnown RBP19.83■□□□□ 0.77
Col4a1-201ENSMUST00000033898 Rtl5Q5DTT4 599 aa19.75■□□□□ 0.75
Col4a1-201ENSMUST00000033898 DiexfQ8BTT6 772 aaKnown RBP19.74■□□□□ 0.75
Col4a1-201ENSMUST00000033898 Eid3Q3V124 375 aa19.7■□□□□ 0.74
Col4a1-201ENSMUST00000033898 Anp32aO35381 247 aa19.68■□□□□ 0.74
Col4a1-201ENSMUST00000033898 Rtl1Q7M732 1744 aa19.66■□□□□ 0.74
Col4a1-201ENSMUST00000033898 Ythdc1E9Q5K9 736 aaKnown RBP19.64■□□□□ 0.74
Col4a1-201ENSMUST00000033898 CatipB9EKE5 520 aa19.61■□□□□ 0.73
Col4a1-201ENSMUST00000033898 ClspnQ80YR7 1315 aa19.58■□□□□ 0.73
Col4a1-201ENSMUST00000033898 Rad21Q61550 635 aaKnown RBP19.53■□□□□ 0.72
Col4a1-201ENSMUST00000033898 Vsig10D3YX43 558 aa19.51■□□□□ 0.71
Col4a1-201ENSMUST00000033898 Lmod3E9QA62 571 aa19.48■□□□□ 0.71
Col4a1-201ENSMUST00000033898 Upf2A2AT37 1269 aaKnown RBP19.4■□□□□ 0.7
Col4a1-201ENSMUST00000033898 Ppp4r2Q0VGB7 417 aa19.38■□□□□ 0.69
Col4a1-201ENSMUST00000033898 Trim26Q99PN3 545 aa19.37■□□□□ 0.69
Col4a1-201ENSMUST00000033898 Irx6Q9ER75 438 aa19.37■□□□□ 0.69
Col4a1-201ENSMUST00000033898 Hsp90aa1P07901 733 aaKnown RBP19.37■□□□□ 0.69
Col4a1-201ENSMUST00000033898 DekQ7TNV0 380 aaKnown RBP19.35■□□□□ 0.69
Col4a1-201ENSMUST00000033898 Chic2Q9D9G3 165 aa19.33■□□□□ 0.69
Col4a1-201ENSMUST00000033898 P3h3Q8CG70 732 aa19.32■□□□□ 0.68
Col4a1-201ENSMUST00000033898 Safb2Q80YR5 991 aaKnown RBP19.31■□□□□ 0.68
Col4a1-201ENSMUST00000033898 Sall2Q9QX96 1004 aa19.24■□□□□ 0.67
Col4a1-201ENSMUST00000033898 Fgd1P52734 960 aa19.24■□□□□ 0.67
Col4a1-201ENSMUST00000033898 Calr4Q3TQS0 420 aa19.22■□□□□ 0.67
Col4a1-201ENSMUST00000033898 Clip1Q922J3 1391 aa19.21■□□□□ 0.67
Col4a1-201ENSMUST00000033898 Arid4bA2CG63 1314 aaKnown RBP19.21■□□□□ 0.67
Col4a1-201ENSMUST00000033898 Hdac5Q9Z2V6 1113 aa19.2■□□□□ 0.66
Col4a1-201ENSMUST00000033898 Mrs2Q5NCE8 434 aa19.09■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 107.3 ms