RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Plppr3Q7TPB0 716 aa22.24■■□□□ 1.15
Ubfd1-201ENSMUST00000033158 Kif15Q6P9L6 1387 aa22.22■■□□□ 1.15
Ubfd1-201ENSMUST00000033158 Rsf1E9PWW9 1441 aaKnown RBP22.22■■□□□ 1.15
Ubfd1-201ENSMUST00000033158 Wdr43Q6ZQL4 677 aaKnown RBP22.18■■□□□ 1.14
Ubfd1-201ENSMUST00000033158 Rangap1P46061 589 aaKnown RBP22.17■■□□□ 1.14
Ubfd1-201ENSMUST00000033158 Rgl3Q3UYI5 709 aa22.16■■□□□ 1.14
Ubfd1-201ENSMUST00000033158 Aebp2Q9Z248 504 aaKnown RBP22.13■■□□□ 1.13
Ubfd1-201ENSMUST00000033158 Eea1Q8BL66 1411 aa22.12■■□□□ 1.13
Ubfd1-201ENSMUST00000033158 DiexfQ8BTT6 772 aaKnown RBP22.08■■□□□ 1.13
Ubfd1-201ENSMUST00000033158 Ccdc18Q640L5 1455 aa22.02■■□□□ 1.11
Ubfd1-201ENSMUST00000033158 Safb2Q80YR5 991 aaKnown RBP21.95■■□□□ 1.1
Ubfd1-201ENSMUST00000033158 Grwd1Q810D6 446 aaKnown RBP21.95■■□□□ 1.1
Ubfd1-201ENSMUST00000033158 Arhgap27A2AB59 869 aa21.93■■□□□ 1.1
Ubfd1-201ENSMUST00000033158 Ofd1Q80Z25 1017 aa21.93■■□□□ 1.1
Ubfd1-201ENSMUST00000033158 P3h3Q8CG70 732 aa21.93■■□□□ 1.1
Ubfd1-201ENSMUST00000033158 Ercc6F8VPZ5 1481 aa21.92■■□□□ 1.1
Ubfd1-201ENSMUST00000033158 Kdm2aP59997 1161 aa21.91■■□□□ 1.1
Ubfd1-201ENSMUST00000033158 Card11Q8CIS0 1159 aa21.88■■□□□ 1.09
Ubfd1-201ENSMUST00000033158 Trim26Q99PN3 545 aa21.88■■□□□ 1.09
Ubfd1-201ENSMUST00000033158 Mroh3A0A1D5RM54 893 aa21.87■■□□□ 1.09
Ubfd1-201ENSMUST00000033158 Fgd1P52734 960 aa21.87■■□□□ 1.09
Ubfd1-201ENSMUST00000033158 Cwc22Q8C5N3 908 aaKnown RBP21.87■■□□□ 1.09
Ubfd1-201ENSMUST00000033158 IqubQ8CDK3 788 aa21.83■■□□□ 1.08
Ubfd1-201ENSMUST00000033158 Srpk2O54781 681 aaKnown RBP21.81■■□□□ 1.08
Ubfd1-201ENSMUST00000033158 Mtus2Q3UHD3 1353 aa21.81■■□□□ 1.08
Ubfd1-201ENSMUST00000033158 Kdm5dQ62240 1548 aa21.8■■□□□ 1.08
Ubfd1-201ENSMUST00000033158 Rrp7aQ9D1C9 280 aaKnown RBP21.79■■□□□ 1.08
Ubfd1-201ENSMUST00000033158 Mia2Q91ZV0 1396 aa21.79■■□□□ 1.08
Ubfd1-201ENSMUST00000033158 Trim30dE9PWL0 497 aa21.78■■□□□ 1.08
Ubfd1-201ENSMUST00000033158 CanxP35564 591 aaKnown RBP21.77■■□□□ 1.08
Ubfd1-201ENSMUST00000033158 Gm20521D3Z5F7 333 aa21.77■■□□□ 1.08
Ubfd1-201ENSMUST00000033158 1700123L14RikQ3V2K7 440 aa21.75■■□□□ 1.07
Ubfd1-201ENSMUST00000033158 Hsp90ab1P11499 724 aaKnown RBP21.72■■□□□ 1.07
Ubfd1-201ENSMUST00000033158 DekQ7TNV0 380 aaKnown RBP21.72■■□□□ 1.07
Ubfd1-201ENSMUST00000033158 Hsp90aa1P07901 733 aaKnown RBP21.72■■□□□ 1.07
Ubfd1-201ENSMUST00000033158 Exosc9Q9JHI7 438 aaKnown RBP21.71■■□□□ 1.07
Ubfd1-201ENSMUST00000033158 Hspa5P20029 655 aaKnown RBP21.68■■□□□ 1.06
Ubfd1-201ENSMUST00000033158 Ccdc9Q8VC31 543 aaKnown RBP21.67■■□□□ 1.06
Ubfd1-201ENSMUST00000033158 Apbb1Q9QXJ1 710 aa21.66■■□□□ 1.06
Ubfd1-201ENSMUST00000033158 Ccdc88bQ4QRL3 1481 aa21.64■■□□□ 1.06
Ubfd1-201ENSMUST00000033158 Neurod2Q62414 383 aa21.64■■□□□ 1.06
Ubfd1-201ENSMUST00000033158 Fam71e1A1L3C1 212 aa21.64■■□□□ 1.05
Ubfd1-201ENSMUST00000033158 Vsig10D3YX43 558 aa21.63■■□□□ 1.05
Ubfd1-201ENSMUST00000033158 Cep162Q6ZQ06 1403 aa21.61■■□□□ 1.05
Ubfd1-201ENSMUST00000033158 Mapk8ip3Q9ESN9 1337 aa21.61■■□□□ 1.05
Ubfd1-201ENSMUST00000033158 Stk24Q99KH8 431 aa21.61■■□□□ 1.05
Ubfd1-201ENSMUST00000033158 Irx6Q9ER75 438 aa21.59■■□□□ 1.05
Ubfd1-201ENSMUST00000033158 Kif27Q7M6Z4 1394 aa21.57■■□□□ 1.04
Ubfd1-201ENSMUST00000033158 Stag3O70576 1240 aa21.55■■□□□ 1.04
Ubfd1-201ENSMUST00000033158 Wwc2Q6NXJ0 1187 aa21.55■■□□□ 1.04
Ubfd1-201ENSMUST00000033158 Fmn1Q05860 1466 aa21.54■■□□□ 1.04
Ubfd1-201ENSMUST00000033158 Pkd2O35245 966 aa21.54■■□□□ 1.04
Ubfd1-201ENSMUST00000033158 Pds5bQ4VA53 1446 aaKnown RBP21.53■■□□□ 1.04
Ubfd1-201ENSMUST00000033158 Aebp1Q640N1 1128 aa21.53■■□□□ 1.04
Ubfd1-201ENSMUST00000033158 Map4P27546 1125 aaKnown RBP21.52■■□□□ 1.04
Ubfd1-201ENSMUST00000033158 Trim44Q9QXA7 346 aa21.52■■□□□ 1.04
Ubfd1-201ENSMUST00000033158 Arid4bA2CG63 1314 aaKnown RBP21.48■■□□□ 1.03
Ubfd1-201ENSMUST00000033158 Ppm1gQ61074 542 aa21.48■■□□□ 1.03
Ubfd1-201ENSMUST00000033158 Gm6268A2A3U9 297 aa21.46■■□□□ 1.03
Ubfd1-201ENSMUST00000033158 Htatsf1Q8BGC0 757 aa21.46■■□□□ 1.03
Ubfd1-201ENSMUST00000033158 Chmp4bQ9D8B3 224 aaKnown RBP21.45■■□□□ 1.03
Ubfd1-201ENSMUST00000033158 Rundc1Q0VDN7 615 aa21.45■■□□□ 1.02
Ubfd1-201ENSMUST00000033158 NudcO35685 332 aaKnown RBP21.44■■□□□ 1.02
Ubfd1-201ENSMUST00000033158 Iqcf3Q9D498 203 aa21.44■■□□□ 1.02
Ubfd1-201ENSMUST00000033158 Cnga1P29974 684 aa21.43■■□□□ 1.02
Ubfd1-201ENSMUST00000033158 CatipB9EKE5 520 aa21.43■■□□□ 1.02
Ubfd1-201ENSMUST00000033158 Zfp777B9EKF4 885 aa21.43■■□□□ 1.02
Ubfd1-201ENSMUST00000033158 Dbr1Q923B1 550 aa21.42■■□□□ 1.02
Ubfd1-201ENSMUST00000033158 NgefQ8CHT1 710 aa21.41■■□□□ 1.02
Ubfd1-201ENSMUST00000033158 Ccdc27Q3V036 639 aa21.41■■□□□ 1.02
Ubfd1-201ENSMUST00000033158 Fyco1Q8VDC1 1437 aa21.4■■□□□ 1.02
Ubfd1-201ENSMUST00000033158 SafbD3YXK2 937 aaKnown RBP21.4■■□□□ 1.02
Ubfd1-201ENSMUST00000033158 Plcb2A3KGF7 1181 aa21.39■■□□□ 1.02
Ubfd1-201ENSMUST00000033158 Cabp1Q9JLK7 227 aa21.39■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 Map7O88735 730 aa21.38■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 Sin3aQ60520 1274 aaKnown RBP21.38■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 Rwdd1Q9CQK7 243 aa21.38■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 Trak1Q6PD31 939 aa21.38■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 Ythdc1E9Q5K9 736 aaKnown RBP21.38■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 Mphosph9A6H5Y1 991 aa21.36■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 1700019A02RikA0A087WPV9 146 aa21.36■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 Mbd3Q9Z2D8 285 aaKnown RBP21.36■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 PtmaP26350 111 aa21.35■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 B4galnt3Q6L8S8 986 aa21.35■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 CntlnA2AM05 1397 aa21.34■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 Armcx1Q9CX83 456 aa21.34■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 Fhad1A6PWD2 1420 aa21.34■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 Ifit1bl1D3Z6F0 470 aa21.33■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 Exoc6Q8R313 802 aa21.33■■□□□ 1.01
Ubfd1-201ENSMUST00000033158 Lmod3E9QA62 571 aa21.32■■□□□ 1
Ubfd1-201ENSMUST00000033158 Rpap1Q80TE0 1409 aa21.31■■□□□ 1
Ubfd1-201ENSMUST00000033158 Gtf2e1Q9D0D5 440 aa21.3■■□□□ 1
Ubfd1-201ENSMUST00000033158 Zscan21Q07231 555 aa21.29■■□□□ 1
Ubfd1-201ENSMUST00000033158 Slc4a3P16283 1227 aa21.29■■□□□ 1
Ubfd1-201ENSMUST00000033158 Arid3cA6PWV5 409 aa21.28■■□□□ 1
Ubfd1-201ENSMUST00000033158 Arhgap35Q91YM2 1499 aa21.28■■□□□ 1
Ubfd1-201ENSMUST00000033158 Tcerg1Q8CGF7 1100 aaKnown RBP21.28■■□□□ 1
Ubfd1-201ENSMUST00000033158 MyclP10166 368 aa21.27■■□□□ 1
Ubfd1-201ENSMUST00000033158 Tmf1B9EKI3 1091 aa21.27■■□□□ 1
Ubfd1-201ENSMUST00000033158 CftrP26361 1476 aa21.27■□□□□ 0.99
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms