RNA–Protein interactions for RNA: ENSMUST00000004949.7

Traf6-201, Transcript of TNF receptor-associated factor 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf6, Length 6,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6-201ENSMUST00000004949 Kdm2aP59997 1161 aa17.94■□□□□ 0.46
Traf6-201ENSMUST00000004949 Pds5bQ4VA53 1446 aaKnown RBP17.93■□□□□ 0.46
Traf6-201ENSMUST00000004949 Grwd1Q810D6 446 aaKnown RBP17.93■□□□□ 0.46
Traf6-201ENSMUST00000004949 ArxO35085 564 aa17.93■□□□□ 0.46
Traf6-201ENSMUST00000004949 Rrp7aQ9D1C9 280 aaKnown RBP17.91■□□□□ 0.46
Traf6-201ENSMUST00000004949 Mrs2Q5NCE8 434 aa17.87■□□□□ 0.45
Traf6-201ENSMUST00000004949 Ccdc88bQ4QRL3 1481 aa17.86■□□□□ 0.45
Traf6-201ENSMUST00000004949 Sycp2Q9CUU3 1500 aa17.85■□□□□ 0.45
Traf6-201ENSMUST00000004949 MyclP10166 368 aa17.84■□□□□ 0.45
Traf6-201ENSMUST00000004949 Arid3cA6PWV5 409 aa17.8■□□□□ 0.44
Traf6-201ENSMUST00000004949 Aebp2Q9Z248 504 aaKnown RBP17.79■□□□□ 0.44
Traf6-201ENSMUST00000004949 Stk24Q99KH8 431 aa17.79■□□□□ 0.44
Traf6-201ENSMUST00000004949 Trim26Q99PN3 545 aa17.79■□□□□ 0.44
Traf6-201ENSMUST00000004949 Mroh3A0A1D5RM54 893 aa17.78■□□□□ 0.44
Traf6-201ENSMUST00000004949 Ppp1r18Q8BQ30 594 aa17.77■□□□□ 0.44
Traf6-201ENSMUST00000004949 AknaQ80VW7 1404 aa17.76■□□□□ 0.43
Traf6-201ENSMUST00000004949 Cecr2E9Q2Z1 1453 aa17.76■□□□□ 0.43
Traf6-201ENSMUST00000004949 Irx6Q9ER75 438 aa17.75■□□□□ 0.43
Traf6-201ENSMUST00000004949 Mtus2Q3UHD3 1353 aa17.75■□□□□ 0.43
Traf6-201ENSMUST00000004949 Srpk2O54781 681 aaKnown RBP17.72■□□□□ 0.43
Traf6-201ENSMUST00000004949 DiexfQ8BTT6 772 aaKnown RBP17.72■□□□□ 0.43
Traf6-201ENSMUST00000004949 Anp32aO35381 247 aa17.71■□□□□ 0.43
Traf6-201ENSMUST00000004949 NgefQ8CHT1 710 aa17.71■□□□□ 0.43
Traf6-201ENSMUST00000004949 Gm20521D3Z5F7 333 aa17.71■□□□□ 0.42
Traf6-201ENSMUST00000004949 Cux2P70298 1426 aa17.69■□□□□ 0.42
Traf6-201ENSMUST00000004949 Rpap1Q80TE0 1409 aa17.68■□□□□ 0.42
Traf6-201ENSMUST00000004949 IqubQ8CDK3 788 aa17.68■□□□□ 0.42
Traf6-201ENSMUST00000004949 Kif27Q7M6Z4 1394 aa17.67■□□□□ 0.42
Traf6-201ENSMUST00000004949 Card11Q8CIS0 1159 aa17.67■□□□□ 0.42
Traf6-201ENSMUST00000004949 Fmn1Q05860 1466 aa17.66■□□□□ 0.42
Traf6-201ENSMUST00000004949 Aebp1Q640N1 1128 aa17.65■□□□□ 0.42
Traf6-201ENSMUST00000004949 Exosc9Q9JHI7 438 aaKnown RBP17.64■□□□□ 0.41
Traf6-201ENSMUST00000004949 ScribQ80U72 1612 aa17.63■□□□□ 0.41
Traf6-201ENSMUST00000004949 Ppp4r2Q0VGB7 417 aa17.63■□□□□ 0.41
Traf6-201ENSMUST00000004949 Calr4Q3TQS0 420 aa17.63■□□□□ 0.41
Traf6-201ENSMUST00000004949 Cep162Q6ZQ06 1403 aa17.62■□□□□ 0.41
Traf6-201ENSMUST00000004949 CftrP26361 1476 aa17.61■□□□□ 0.41
Traf6-201ENSMUST00000004949 DaxxO35613 739 aa17.61■□□□□ 0.41
Traf6-201ENSMUST00000004949 Hspa5P20029 655 aaKnown RBP17.61■□□□□ 0.41
Traf6-201ENSMUST00000004949 Cnga1P29974 684 aa17.61■□□□□ 0.41
Traf6-201ENSMUST00000004949 Stag3O70576 1240 aa17.58■□□□□ 0.41
Traf6-201ENSMUST00000004949 Baz1bQ9Z277 1479 aa17.58■□□□□ 0.4
Traf6-201ENSMUST00000004949 Anks4bQ8K3X6 423 aa17.55■□□□□ 0.4
Traf6-201ENSMUST00000004949 Synj1Q8CHC4 1574 aa17.55■□□□□ 0.4
Traf6-201ENSMUST00000004949 Ecm2Q5FW85 670 aa17.54■□□□□ 0.4
Traf6-201ENSMUST00000004949 Phldb1Q6PDH0 1371 aaKnown RBP17.53■□□□□ 0.4
Traf6-201ENSMUST00000004949 Map4P27546 1125 aaKnown RBP17.53■□□□□ 0.4
Traf6-201ENSMUST00000004949 Apbb1Q9QXJ1 710 aa17.52■□□□□ 0.4
Traf6-201ENSMUST00000004949 Fgd1P52734 960 aa17.52■□□□□ 0.4
Traf6-201ENSMUST00000004949 Neurod2Q62414 383 aa17.52■□□□□ 0.39
Traf6-201ENSMUST00000004949 Cabp1Q9JLK7 227 aa17.51■□□□□ 0.39
Traf6-201ENSMUST00000004949 Upf2A2AT37 1269 aaKnown RBP17.48■□□□□ 0.39
Traf6-201ENSMUST00000004949 Ofd1Q80Z25 1017 aa17.47■□□□□ 0.39
Traf6-201ENSMUST00000004949 Pkd2O35245 966 aa17.47■□□□□ 0.39
Traf6-201ENSMUST00000004949 Atad2bE9Q166 1460 aaKnown RBP17.47■□□□□ 0.39
Traf6-201ENSMUST00000004949 Mia2Q91ZV0 1396 aa17.47■□□□□ 0.39
Traf6-201ENSMUST00000004949 Stk26Q99JT2 416 aa17.47■□□□□ 0.39
Traf6-201ENSMUST00000004949 Trak1Q6PD31 939 aa17.46■□□□□ 0.39
Traf6-201ENSMUST00000004949 Rtl5Q5DTT4 599 aa17.43■□□□□ 0.38
Traf6-201ENSMUST00000004949 Lemd3Q9WU40 921 aa17.42■□□□□ 0.38
Traf6-201ENSMUST00000004949 Smarca2Q6DIC0 1577 aa17.42■□□□□ 0.38
Traf6-201ENSMUST00000004949 Ifit1bl1D3Z6F0 470 aa17.42■□□□□ 0.38
Traf6-201ENSMUST00000004949 MlecQ6ZQI3 291 aaKnown RBP17.42■□□□□ 0.38
Traf6-201ENSMUST00000004949 Crybg2B7ZCC2 1516 aa17.41■□□□□ 0.38
Traf6-201ENSMUST00000004949 4930567H17RikQ3V0K5 233 aa17.41■□□□□ 0.38
Traf6-201ENSMUST00000004949 Smarca4Q3TKT4 1613 aaKnown RBP17.41■□□□□ 0.38
Traf6-201ENSMUST00000004949 Rapgef2Q8CHG7 1496 aa17.41■□□□□ 0.38
Traf6-201ENSMUST00000004949 Cwc22Q8C5N3 908 aaKnown RBP17.4■□□□□ 0.38
Traf6-201ENSMUST00000004949 Wdr43Q6ZQL4 677 aaKnown RBP17.39■□□□□ 0.37
Traf6-201ENSMUST00000004949 1700019A02RikA0A087WPV9 146 aa17.39■□□□□ 0.37
Traf6-201ENSMUST00000004949 Sin3aQ60520 1274 aaKnown RBP17.39■□□□□ 0.37
Traf6-201ENSMUST00000004949 Rundc1Q0VDN7 615 aa17.38■□□□□ 0.37
Traf6-201ENSMUST00000004949 Arid4bA2CG63 1314 aaKnown RBP17.38■□□□□ 0.37
Traf6-201ENSMUST00000004949 Rtn4Q99P72 1162 aaKnown RBP17.37■□□□□ 0.37
Traf6-201ENSMUST00000004949 Wwc2Q6NXJ0 1187 aa17.36■□□□□ 0.37
Traf6-201ENSMUST00000004949 Kif3bQ61771 747 aa17.35■□□□□ 0.37
Traf6-201ENSMUST00000004949 Plin1Q8CGN5 517 aa17.35■□□□□ 0.37
Traf6-201ENSMUST00000004949 Mapk8ip3Q9ESN9 1337 aa17.35■□□□□ 0.37
Traf6-201ENSMUST00000004949 Gm6268A2A3U9 297 aa17.35■□□□□ 0.37
Traf6-201ENSMUST00000004949 Mphosph9A6H5Y1 991 aa17.35■□□□□ 0.37
Traf6-201ENSMUST00000004949 Fyco1Q8VDC1 1437 aa17.34■□□□□ 0.37
Traf6-201ENSMUST00000004949 LrpprcQ6PB66 1392 aaKnown RBP17.33■□□□□ 0.36
Traf6-201ENSMUST00000004949 Aplp2Q06335 707 aa17.33■□□□□ 0.36
Traf6-201ENSMUST00000004949 Dhx29Q6PGC1 1365 aaKnown RBP17.31■□□□□ 0.36
Traf6-201ENSMUST00000004949 CntlnA2AM05 1397 aa17.3■□□□□ 0.36
Traf6-201ENSMUST00000004949 Znf316Q6PGE4 1016 aa17.29■□□□□ 0.36
Traf6-201ENSMUST00000004949 Vsig10D3YX43 558 aa17.29■□□□□ 0.36
Traf6-201ENSMUST00000004949 Sox12Q04890 314 aa17.29■□□□□ 0.36
Traf6-201ENSMUST00000004949 Myt1Q8CFC2 1127 aa17.29■□□□□ 0.36
Traf6-201ENSMUST00000004949 Txndc2Q6P902 515 aa17.28■□□□□ 0.36
Traf6-201ENSMUST00000004949 Carmil1Q6EDY6 1374 aa17.28■□□□□ 0.36
Traf6-201ENSMUST00000004949 Psme1P97371 249 aa17.28■□□□□ 0.36
Traf6-201ENSMUST00000004949 Trim30dE9PWL0 497 aa17.27■□□□□ 0.35
Traf6-201ENSMUST00000004949 Armcx1Q9CX83 456 aa17.27■□□□□ 0.35
Traf6-201ENSMUST00000004949 Sart1Q9Z315 806 aaKnown RBP17.27■□□□□ 0.35
Traf6-201ENSMUST00000004949 Iqgap2Q3UQ44 1575 aa17.25■□□□□ 0.35
Traf6-201ENSMUST00000004949 Gtf2e1Q9D0D5 440 aa17.25■□□□□ 0.35
Traf6-201ENSMUST00000004949 Arhgap35Q91YM2 1499 aa17.25■□□□□ 0.35
Traf6-201ENSMUST00000004949 Cttnbp2B9EJA2 1648 aa17.24■□□□□ 0.35
Traf6-201ENSMUST00000004949 Ccnb3Q810T2 1396 aa17.23■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms