RNA–Protein interactions for RNA: ENSMUST00000004949.7

Traf6-201, Transcript of TNF receptor-associated factor 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf6, Length 6,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6-201ENSMUST00000004949 Rhox8Q6VSS7 320 aa24.18■■□□□ 1.46
Traf6-201ENSMUST00000004949 Ccdc136Q3TVA9 1136 aa21.71■■□□□ 1.07
Traf6-201ENSMUST00000004949 Ehmt2Q9Z148 1263 aaKnown RBP21.57■■□□□ 1.04
Traf6-201ENSMUST00000004949 NischQ80TM9 1593 aa21.56■■□□□ 1.04
Traf6-201ENSMUST00000004949 Esf1Q3V1V3 845 aaKnown RBP21.44■■□□□ 1.02
Traf6-201ENSMUST00000004949 Cngb1E1AZ71 1325 aa21.39■■□□□ 1.02
Traf6-201ENSMUST00000004949 Gab3Q8BSM5 595 aa21.1■□□□□ 0.97
Traf6-201ENSMUST00000004949 Zeb1Q64318 1117 aa20.94■□□□□ 0.94
Traf6-201ENSMUST00000004949 Trim41Q5NCC3 630 aa20.89■□□□□ 0.94
Traf6-201ENSMUST00000004949 Npm2Q80W85 207 aa20.82■□□□□ 0.92
Traf6-201ENSMUST00000004949 Myt1lP97500 1187 aa20.74■□□□□ 0.91
Traf6-201ENSMUST00000004949 Ube2uB1AUC4 352 aa20.71■□□□□ 0.91
Traf6-201ENSMUST00000004949 Rpgrip1Q9EPQ2 1331 aa20.59■□□□□ 0.89
Traf6-201ENSMUST00000004949 Abcc9P70170 1546 aa20.55■□□□□ 0.88
Traf6-201ENSMUST00000004949 Wdr66E9Q743 1299 aa20.5■□□□□ 0.87
Traf6-201ENSMUST00000004949 Gm35339A0A140LHH9 1649 aa20.38■□□□□ 0.85
Traf6-201ENSMUST00000004949 Las1lA2BE28 776 aaKnown RBP20.35■□□□□ 0.85
Traf6-201ENSMUST00000004949 Il27Q8K3I6 234 aa20.35■□□□□ 0.85
Traf6-201ENSMUST00000004949 Zcchc6Q5BLK4 1491 aaKnown RBP20.14■□□□□ 0.81
Traf6-201ENSMUST00000004949 UbtfP25976 765 aaKnown RBP20.14■□□□□ 0.81
Traf6-201ENSMUST00000004949 Ap3b1Q9Z1T1 1105 aa19.87■□□□□ 0.77
Traf6-201ENSMUST00000004949 Ccdc180J3QNE4 1664 aa19.7■□□□□ 0.74
Traf6-201ENSMUST00000004949 Abcc8B2RUS7 1588 aa19.69■□□□□ 0.74
Traf6-201ENSMUST00000004949 HrcG5E8J6 738 aa19.66■□□□□ 0.74
Traf6-201ENSMUST00000004949 Acin1Q9JIX8 1338 aaKnown RBP19.62■□□□□ 0.73
Traf6-201ENSMUST00000004949 Fam50aQ9WV03 339 aaKnown RBP19.58■□□□□ 0.73
Traf6-201ENSMUST00000004949 Slc24a1Q91WD8 1130 aa19.58■□□□□ 0.72
Traf6-201ENSMUST00000004949 NefmP08553 848 aa19.5■□□□□ 0.71
Traf6-201ENSMUST00000004949 Neurod1Q60867 357 aa19.46■□□□□ 0.71
Traf6-201ENSMUST00000004949 Rtl1Q7M732 1744 aa19.44■□□□□ 0.7
Traf6-201ENSMUST00000004949 Npm1Q61937 292 aaKnown RBP19.41■□□□□ 0.7
Traf6-201ENSMUST00000004949 Ppargc1bQ8VHJ7 1014 aa19.36■□□□□ 0.69
Traf6-201ENSMUST00000004949 Ifnlr1Q8CGK5 535 aa19.29■□□□□ 0.68
Traf6-201ENSMUST00000004949 Lmod2Q3UHZ5 550 aa19.29■□□□□ 0.68
Traf6-201ENSMUST00000004949 Zbtb7cQ8VCZ7 619 aa19.29■□□□□ 0.68
Traf6-201ENSMUST00000004949 Os9Q8K2C7 672 aa19.21■□□□□ 0.67
Traf6-201ENSMUST00000004949 NclP09405 707 aaKnown RBP19.19■□□□□ 0.66
Traf6-201ENSMUST00000004949 Plekhg3Q4VAC9 1341 aa19.17■□□□□ 0.66
Traf6-201ENSMUST00000004949 Pelp1Q9DBD5 1123 aaKnown RBP19.1■□□□□ 0.65
Traf6-201ENSMUST00000004949 Fkbp15Q6P9Q6 1216 aaKnown RBP19.04■□□□□ 0.64
Traf6-201ENSMUST00000004949 Mier1Q5UAK0 511 aa19.02■□□□□ 0.63
Traf6-201ENSMUST00000004949 Stra8P70278 393 aa19.01■□□□□ 0.63
Traf6-201ENSMUST00000004949 Hnrnpul2Q00PI9 745 aaKnown RBP19.01■□□□□ 0.63
Traf6-201ENSMUST00000004949 Ubl4bQ9CQ84 188 aa19■□□□□ 0.63
Traf6-201ENSMUST00000004949 Rb1cc1Q9ESK9 1588 aa18.99■□□□□ 0.63
Traf6-201ENSMUST00000004949 Chic1Q8CBW7 227 aa18.99■□□□□ 0.63
Traf6-201ENSMUST00000004949 Brd4Q9ESU6 1400 aaKnown RBP18.94■□□□□ 0.62
Traf6-201ENSMUST00000004949 TonslQ6NZL6 1363 aa18.92■□□□□ 0.62
Traf6-201ENSMUST00000004949 NrdcQ8BHG1 1161 aa18.91■□□□□ 0.62
Traf6-201ENSMUST00000004949 Cdk11bP24788 784 aaKnown RBP18.9■□□□□ 0.62
Traf6-201ENSMUST00000004949 Eif5bQ05D44 1216 aaKnown RBP18.89■□□□□ 0.61
Traf6-201ENSMUST00000004949 Zbtb4Q5F293 982 aa18.88■□□□□ 0.61
Traf6-201ENSMUST00000004949 Plppr3Q7TPB0 716 aa18.88■□□□□ 0.61
Traf6-201ENSMUST00000004949 Pcgf6Q99NA9 353 aa18.87■□□□□ 0.61
Traf6-201ENSMUST00000004949 Gm13697A2AK42 830 aa18.85■□□□□ 0.61
Traf6-201ENSMUST00000004949 Anp32bQ9EST5 272 aaKnown RBP18.83■□□□□ 0.61
Traf6-201ENSMUST00000004949 Erich6D3Z6S9 713 aa18.8■□□□□ 0.6
Traf6-201ENSMUST00000004949 Supt5hO55201 1082 aaKnown RBP18.79■□□□□ 0.6
Traf6-201ENSMUST00000004949 Nop58Q6DFW4 536 aaKnown RBP18.78■□□□□ 0.6
Traf6-201ENSMUST00000004949 CenpbP27790 599 aa18.76■□□□□ 0.59
Traf6-201ENSMUST00000004949 Eid3Q3V124 375 aa18.75■□□□□ 0.59
Traf6-201ENSMUST00000004949 Dcaf1Q80TR8 1506 aa18.73■□□□□ 0.59
Traf6-201ENSMUST00000004949 NacadQ5SWP3 1504 aa18.71■□□□□ 0.59
Traf6-201ENSMUST00000004949 Atp1b4Q99ME6 356 aa18.69■□□□□ 0.58
Traf6-201ENSMUST00000004949 Mapk8ip2Q9ERE9 830 aa18.69■□□□□ 0.58
Traf6-201ENSMUST00000004949 Clip1Q922J3 1391 aa18.69■□□□□ 0.58
Traf6-201ENSMUST00000004949 Prdm10Q3UTQ7 1184 aa18.67■□□□□ 0.58
Traf6-201ENSMUST00000004949 Ttbk1Q6PCN3 1308 aa18.62■□□□□ 0.57
Traf6-201ENSMUST00000004949 Cep164Q5DU05 1446 aa18.54■□□□□ 0.56
Traf6-201ENSMUST00000004949 Chic2Q9D9G3 165 aa18.54■□□□□ 0.56
Traf6-201ENSMUST00000004949 NeflP08551 543 aa18.53■□□□□ 0.56
Traf6-201ENSMUST00000004949 Gm13695A2AK44 830 aa18.51■□□□□ 0.55
Traf6-201ENSMUST00000004949 Kif15Q6P9L6 1387 aa18.45■□□□□ 0.54
Traf6-201ENSMUST00000004949 Amer1Q7TS75 1132 aa18.44■□□□□ 0.54
Traf6-201ENSMUST00000004949 Baz1aO88379 1555 aa18.43■□□□□ 0.54
Traf6-201ENSMUST00000004949 Kdm5dQ62240 1548 aa18.4■□□□□ 0.54
Traf6-201ENSMUST00000004949 Tnnt3Q9QZ47 272 aa18.38■□□□□ 0.53
Traf6-201ENSMUST00000004949 BlmO88700 1416 aa18.37■□□□□ 0.53
Traf6-201ENSMUST00000004949 Nlrp6Q91WS2 869 aa18.32■□□□□ 0.52
Traf6-201ENSMUST00000004949 ClspnQ80YR7 1315 aa18.31■□□□□ 0.52
Traf6-201ENSMUST00000004949 Rsf1E9PWW9 1441 aaKnown RBP18.31■□□□□ 0.52
Traf6-201ENSMUST00000004949 Ercc6F8VPZ5 1481 aa18.31■□□□□ 0.52
Traf6-201ENSMUST00000004949 Setd5Q5XJV7 1441 aa18.27■□□□□ 0.52
Traf6-201ENSMUST00000004949 Polr3glQ8R0C0 218 aa18.25■□□□□ 0.51
Traf6-201ENSMUST00000004949 Golga3P55937 1487 aa18.24■□□□□ 0.51
Traf6-201ENSMUST00000004949 Arhgap27A2AB59 869 aa18.24■□□□□ 0.51
Traf6-201ENSMUST00000004949 Safb2Q80YR5 991 aaKnown RBP18.2■□□□□ 0.5
Traf6-201ENSMUST00000004949 Sall2Q9QX96 1004 aa18.17■□□□□ 0.5
Traf6-201ENSMUST00000004949 Rangap1P46061 589 aaKnown RBP18.16■□□□□ 0.5
Traf6-201ENSMUST00000004949 P3h3Q8CG70 732 aa18.15■□□□□ 0.5
Traf6-201ENSMUST00000004949 Ccdc18Q640L5 1455 aa18.14■□□□□ 0.49
Traf6-201ENSMUST00000004949 4933416C03RikQ3V063 378 aa18.12■□□□□ 0.49
Traf6-201ENSMUST00000004949 Ccer2J3QPU5 274 aa18.09■□□□□ 0.49
Traf6-201ENSMUST00000004949 Hdac5Q9Z2V6 1113 aa18.08■□□□□ 0.48
Traf6-201ENSMUST00000004949 Csrnp3P59055 597 aa18.05■□□□□ 0.48
Traf6-201ENSMUST00000004949 Rgl3Q3UYI5 709 aa18.05■□□□□ 0.48
Traf6-201ENSMUST00000004949 Gm38655A0A286YDK6 273 aa18.02■□□□□ 0.48
Traf6-201ENSMUST00000004949 Rad21Q61550 635 aaKnown RBP18■□□□□ 0.47
Traf6-201ENSMUST00000004949 Clstn2Q9ER65 966 aa17.99■□□□□ 0.47
Traf6-201ENSMUST00000004949 Eea1Q8BL66 1411 aa17.94■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms