RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Csrnp3P59055 597 aa18.91■□□□□ 0.62
Col1a1-201ENSMUST00000001547 Ccdc18Q640L5 1455 aa18.87■□□□□ 0.61
Col1a1-201ENSMUST00000001547 Mrs2Q5NCE8 434 aa18.84■□□□□ 0.61
Col1a1-201ENSMUST00000001547 Calr4Q3TQS0 420 aa18.84■□□□□ 0.61
Col1a1-201ENSMUST00000001547 Eea1Q8BL66 1411 aa18.83■□□□□ 0.6
Col1a1-201ENSMUST00000001547 Rad21Q61550 635 aaKnown RBP18.82■□□□□ 0.6
Col1a1-201ENSMUST00000001547 Upf2A2AT37 1269 aaKnown RBP18.8■□□□□ 0.6
Col1a1-201ENSMUST00000001547 Ythdc1E9Q5K9 736 aaKnown RBP18.8■□□□□ 0.6
Col1a1-201ENSMUST00000001547 Rgl3Q3UYI5 709 aa18.77■□□□□ 0.6
Col1a1-201ENSMUST00000001547 Lmod3E9QA62 571 aa18.76■□□□□ 0.59
Col1a1-201ENSMUST00000001547 Ppp4r2Q0VGB7 417 aa18.76■□□□□ 0.59
Col1a1-201ENSMUST00000001547 Rangap1P46061 589 aaKnown RBP18.75■□□□□ 0.59
Col1a1-201ENSMUST00000001547 Arhgap27A2AB59 869 aa18.74■□□□□ 0.59
Col1a1-201ENSMUST00000001547 Aplp2Q06335 707 aa18.73■□□□□ 0.59
Col1a1-201ENSMUST00000001547 Safb2Q80YR5 991 aaKnown RBP18.69■□□□□ 0.58
Col1a1-201ENSMUST00000001547 Aebp2Q9Z248 504 aaKnown RBP18.69■□□□□ 0.58
Col1a1-201ENSMUST00000001547 P3h3Q8CG70 732 aa18.65■□□□□ 0.58
Col1a1-201ENSMUST00000001547 Wdr43Q6ZQL4 677 aaKnown RBP18.62■□□□□ 0.57
Col1a1-201ENSMUST00000001547 Hsp90aa1P07901 733 aaKnown RBP18.62■□□□□ 0.57
Col1a1-201ENSMUST00000001547 Grwd1Q810D6 446 aaKnown RBP18.59■□□□□ 0.57
Col1a1-201ENSMUST00000001547 DekQ7TNV0 380 aaKnown RBP18.56■□□□□ 0.56
Col1a1-201ENSMUST00000001547 Kdm2aP59997 1161 aa18.56■□□□□ 0.56
Col1a1-201ENSMUST00000001547 Mtus2Q3UHD3 1353 aa18.56■□□□□ 0.56
Col1a1-201ENSMUST00000001547 Vsig10D3YX43 558 aa18.56■□□□□ 0.56
Col1a1-201ENSMUST00000001547 Card11Q8CIS0 1159 aa18.54■□□□□ 0.56
Col1a1-201ENSMUST00000001547 Pds5bQ4VA53 1446 aaKnown RBP18.54■□□□□ 0.56
Col1a1-201ENSMUST00000001547 Mroh3A0A1D5RM54 893 aa18.53■□□□□ 0.56
Col1a1-201ENSMUST00000001547 Rrp7aQ9D1C9 280 aaKnown RBP18.53■□□□□ 0.56
Col1a1-201ENSMUST00000001547 Ccdc88bQ4QRL3 1481 aa18.52■□□□□ 0.56
Col1a1-201ENSMUST00000001547 IqubQ8CDK3 788 aa18.51■□□□□ 0.55
Col1a1-201ENSMUST00000001547 Mia2Q91ZV0 1396 aa18.51■□□□□ 0.55
Col1a1-201ENSMUST00000001547 Trim26Q99PN3 545 aa18.51■□□□□ 0.55
Col1a1-201ENSMUST00000001547 Srpk2O54781 681 aaKnown RBP18.51■□□□□ 0.55
Col1a1-201ENSMUST00000001547 Ofd1Q80Z25 1017 aa18.49■□□□□ 0.55
Col1a1-201ENSMUST00000001547 Fmn1Q05860 1466 aa18.48■□□□□ 0.55
Col1a1-201ENSMUST00000001547 Cwc22Q8C5N3 908 aaKnown RBP18.48■□□□□ 0.55
Col1a1-201ENSMUST00000001547 Fgd1P52734 960 aa18.47■□□□□ 0.55
Col1a1-201ENSMUST00000001547 Gm20521D3Z5F7 333 aa18.46■□□□□ 0.55
Col1a1-201ENSMUST00000001547 Cep162Q6ZQ06 1403 aa18.45■□□□□ 0.54
Col1a1-201ENSMUST00000001547 Trim44Q9QXA7 346 aa18.43■□□□□ 0.54
Col1a1-201ENSMUST00000001547 Sycp2Q9CUU3 1500 aa18.42■□□□□ 0.54
Col1a1-201ENSMUST00000001547 Exosc9Q9JHI7 438 aaKnown RBP18.39■□□□□ 0.53
Col1a1-201ENSMUST00000001547 Kif27Q7M6Z4 1394 aa18.39■□□□□ 0.53
Col1a1-201ENSMUST00000001547 Stk24Q99KH8 431 aa18.38■□□□□ 0.53
Col1a1-201ENSMUST00000001547 Hspa5P20029 655 aaKnown RBP18.36■□□□□ 0.53
Col1a1-201ENSMUST00000001547 Ccdc9Q8VC31 543 aaKnown RBP18.35■□□□□ 0.53
Col1a1-201ENSMUST00000001547 Aebp1Q640N1 1128 aa18.33■□□□□ 0.52
Col1a1-201ENSMUST00000001547 Trim30dE9PWL0 497 aa18.31■□□□□ 0.52
Col1a1-201ENSMUST00000001547 Stag3O70576 1240 aa18.31■□□□□ 0.52
Col1a1-201ENSMUST00000001547 Neurod2Q62414 383 aa18.3■□□□□ 0.52
Col1a1-201ENSMUST00000001547 Hsp90ab1P11499 724 aaKnown RBP18.3■□□□□ 0.52
Col1a1-201ENSMUST00000001547 Apbb1Q9QXJ1 710 aa18.3■□□□□ 0.52
Col1a1-201ENSMUST00000001547 Irx6Q9ER75 438 aa18.29■□□□□ 0.52
Col1a1-201ENSMUST00000001547 Crybg2B7ZCC2 1516 aa18.28■□□□□ 0.52
Col1a1-201ENSMUST00000001547 CanxP35564 591 aaKnown RBP18.28■□□□□ 0.52
Col1a1-201ENSMUST00000001547 Mapk8ip3Q9ESN9 1337 aa18.27■□□□□ 0.52
Col1a1-201ENSMUST00000001547 CftrP26361 1476 aa18.27■□□□□ 0.51
Col1a1-201ENSMUST00000001547 Map4P27546 1125 aaKnown RBP18.26■□□□□ 0.51
Col1a1-201ENSMUST00000001547 Rpap1Q80TE0 1409 aa18.26■□□□□ 0.51
Col1a1-201ENSMUST00000001547 Pkd2O35245 966 aa18.25■□□□□ 0.51
Col1a1-201ENSMUST00000001547 Fyco1Q8VDC1 1437 aa18.25■□□□□ 0.51
Col1a1-201ENSMUST00000001547 PtmaP26350 111 aa18.24■□□□□ 0.51
Col1a1-201ENSMUST00000001547 Baz1bQ9Z277 1479 aa18.22■□□□□ 0.51
Col1a1-201ENSMUST00000001547 Arid4bA2CG63 1314 aaKnown RBP18.22■□□□□ 0.51
Col1a1-201ENSMUST00000001547 Cecr2E9Q2Z1 1453 aa18.21■□□□□ 0.51
Col1a1-201ENSMUST00000001547 1700123L14RikQ3V2K7 440 aa18.21■□□□□ 0.51
Col1a1-201ENSMUST00000001547 Cux2P70298 1426 aa18.2■□□□□ 0.5
Col1a1-201ENSMUST00000001547 AknaQ80VW7 1404 aa18.19■□□□□ 0.5
Col1a1-201ENSMUST00000001547 CntlnA2AM05 1397 aa18.19■□□□□ 0.5
Col1a1-201ENSMUST00000001547 Cnga1P29974 684 aa18.19■□□□□ 0.5
Col1a1-201ENSMUST00000001547 NgefQ8CHT1 710 aa18.19■□□□□ 0.5
Col1a1-201ENSMUST00000001547 Arhgap35Q91YM2 1499 aa18.19■□□□□ 0.5
Col1a1-201ENSMUST00000001547 Rundc1Q0VDN7 615 aa18.19■□□□□ 0.5
Col1a1-201ENSMUST00000001547 Wwc2Q6NXJ0 1187 aa18.17■□□□□ 0.5
Col1a1-201ENSMUST00000001547 Fam71e1A1L3C1 212 aa18.17■□□□□ 0.5
Col1a1-201ENSMUST00000001547 Cabp1Q9JLK7 227 aa18.16■□□□□ 0.5
Col1a1-201ENSMUST00000001547 Smarca2Q6DIC0 1577 aa18.15■□□□□ 0.5
Col1a1-201ENSMUST00000001547 Synj1Q8CHC4 1574 aa18.15■□□□□ 0.5
Col1a1-201ENSMUST00000001547 Mphosph9A6H5Y1 991 aa18.14■□□□□ 0.49
Col1a1-201ENSMUST00000001547 Gm6268A2A3U9 297 aa18.14■□□□□ 0.49
Col1a1-201ENSMUST00000001547 MyclP10166 368 aa18.13■□□□□ 0.49
Col1a1-201ENSMUST00000001547 Trak1Q6PD31 939 aa18.13■□□□□ 0.49
Col1a1-201ENSMUST00000001547 Plcb2A3KGF7 1181 aa18.12■□□□□ 0.49
Col1a1-201ENSMUST00000001547 Iqcf3Q9D498 203 aa18.11■□□□□ 0.49
Col1a1-201ENSMUST00000001547 Arid3cA6PWV5 409 aa18.11■□□□□ 0.49
Col1a1-201ENSMUST00000001547 Ifit1bl1D3Z6F0 470 aa18.11■□□□□ 0.49
Col1a1-201ENSMUST00000001547 Ppp1r18Q8BQ30 594 aa18.11■□□□□ 0.49
Col1a1-201ENSMUST00000001547 Fhad1A6PWD2 1420 aa18.11■□□□□ 0.49
Col1a1-201ENSMUST00000001547 NudcO35685 332 aaKnown RBP18.1■□□□□ 0.49
Col1a1-201ENSMUST00000001547 Znf326O88291 580 aa18.1■□□□□ 0.49
Col1a1-201ENSMUST00000001547 Sin3aQ60520 1274 aaKnown RBP18.1■□□□□ 0.49
Col1a1-201ENSMUST00000001547 Rapgef2Q8CHG7 1496 aa18.09■□□□□ 0.49
Col1a1-201ENSMUST00000001547 Phldb1Q6PDH0 1371 aaKnown RBP18.08■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Dbr1Q923B1 550 aa18.07■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Carmil1Q6EDY6 1374 aa18.07■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Chmp4bQ9D8B3 224 aaKnown RBP18.07■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Gtf2e1Q9D0D5 440 aa18.06■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Zfp777B9EKF4 885 aa18.06■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Atad2bE9Q166 1460 aaKnown RBP18.05■□□□□ 0.48
Col1a1-201ENSMUST00000001547 Armcx1Q9CX83 456 aa18.05■□□□□ 0.48
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms