RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Rhox8Q6VSS7 320 aa25.09■■□□□ 1.61
Col1a1-201ENSMUST00000001547 Rpgrip1Q9EPQ2 1331 aa22.54■■□□□ 1.2
Col1a1-201ENSMUST00000001547 Ehmt2Q9Z148 1263 aaKnown RBP22.39■■□□□ 1.17
Col1a1-201ENSMUST00000001547 Ccdc136Q3TVA9 1136 aa22.37■■□□□ 1.17
Col1a1-201ENSMUST00000001547 NischQ80TM9 1593 aa22.36■■□□□ 1.17
Col1a1-201ENSMUST00000001547 Cngb1E1AZ71 1325 aa22.17■■□□□ 1.14
Col1a1-201ENSMUST00000001547 Esf1Q3V1V3 845 aaKnown RBP22.16■■□□□ 1.14
Col1a1-201ENSMUST00000001547 Las1lA2BE28 776 aaKnown RBP22.04■■□□□ 1.12
Col1a1-201ENSMUST00000001547 Trim41Q5NCC3 630 aa21.89■■□□□ 1.09
Col1a1-201ENSMUST00000001547 Pelp1Q9DBD5 1123 aaKnown RBP21.83■■□□□ 1.09
Col1a1-201ENSMUST00000001547 Gab3Q8BSM5 595 aa21.82■■□□□ 1.08
Col1a1-201ENSMUST00000001547 Wdr66E9Q743 1299 aa21.74■■□□□ 1.07
Col1a1-201ENSMUST00000001547 Zeb1Q64318 1117 aa21.65■■□□□ 1.06
Col1a1-201ENSMUST00000001547 Npm2Q80W85 207 aa21.63■■□□□ 1.05
Col1a1-201ENSMUST00000001547 Ube2uB1AUC4 352 aa21.56■■□□□ 1.04
Col1a1-201ENSMUST00000001547 Myt1lP97500 1187 aa21.46■■□□□ 1.03
Col1a1-201ENSMUST00000001547 Amer1Q7TS75 1132 aa21.33■■□□□ 1
Col1a1-201ENSMUST00000001547 Ccdc180J3QNE4 1664 aa21.06■□□□□ 0.96
Col1a1-201ENSMUST00000001547 Acin1Q9JIX8 1338 aaKnown RBP21.06■□□□□ 0.96
Col1a1-201ENSMUST00000001547 UbtfP25976 765 aaKnown RBP21■□□□□ 0.95
Col1a1-201ENSMUST00000001547 CenpbP27790 599 aa20.96■□□□□ 0.95
Col1a1-201ENSMUST00000001547 NefmP08553 848 aa20.92■□□□□ 0.94
Col1a1-201ENSMUST00000001547 HrcG5E8J6 738 aa20.91■□□□□ 0.94
Col1a1-201ENSMUST00000001547 Rtl1Q7M732 1744 aa20.87■□□□□ 0.93
Col1a1-201ENSMUST00000001547 Abcc9P70170 1546 aa20.84■□□□□ 0.93
Col1a1-201ENSMUST00000001547 Il27Q8K3I6 234 aa20.82■□□□□ 0.92
Col1a1-201ENSMUST00000001547 Zcchc6Q5BLK4 1491 aaKnown RBP20.8■□□□□ 0.92
Col1a1-201ENSMUST00000001547 Gm35339A0A140LHH9 1649 aa20.61■□□□□ 0.89
Col1a1-201ENSMUST00000001547 4930567H17RikQ3V0K5 233 aa20.59■□□□□ 0.89
Col1a1-201ENSMUST00000001547 Slc24a1Q91WD8 1130 aa20.59■□□□□ 0.89
Col1a1-201ENSMUST00000001547 Stra8P70278 393 aa20.52■□□□□ 0.88
Col1a1-201ENSMUST00000001547 Ttbk1Q6PCN3 1308 aa20.48■□□□□ 0.87
Col1a1-201ENSMUST00000001547 Ap3b1Q9Z1T1 1105 aa20.47■□□□□ 0.87
Col1a1-201ENSMUST00000001547 Abcc8B2RUS7 1588 aa20.38■□□□□ 0.85
Col1a1-201ENSMUST00000001547 Fam50aQ9WV03 339 aaKnown RBP20.37■□□□□ 0.85
Col1a1-201ENSMUST00000001547 4933416C03RikQ3V063 378 aa20.31■□□□□ 0.84
Col1a1-201ENSMUST00000001547 Cdk11bP24788 784 aaKnown RBP20.25■□□□□ 0.83
Col1a1-201ENSMUST00000001547 Pcgf6Q99NA9 353 aa20.21■□□□□ 0.83
Col1a1-201ENSMUST00000001547 Neurod1Q60867 357 aa20.19■□□□□ 0.82
Col1a1-201ENSMUST00000001547 NclP09405 707 aaKnown RBP20.18■□□□□ 0.82
Col1a1-201ENSMUST00000001547 NrdcQ8BHG1 1161 aa20.07■□□□□ 0.8
Col1a1-201ENSMUST00000001547 TonslQ6NZL6 1363 aa20.05■□□□□ 0.8
Col1a1-201ENSMUST00000001547 Anp32bQ9EST5 272 aaKnown RBP20.04■□□□□ 0.8
Col1a1-201ENSMUST00000001547 Nop58Q6DFW4 536 aaKnown RBP20.04■□□□□ 0.8
Col1a1-201ENSMUST00000001547 Ppargc1bQ8VHJ7 1014 aa20.04■□□□□ 0.8
Col1a1-201ENSMUST00000001547 Myt1Q8CFC2 1127 aa20.04■□□□□ 0.8
Col1a1-201ENSMUST00000001547 Mier1Q5UAK0 511 aa20.01■□□□□ 0.79
Col1a1-201ENSMUST00000001547 Npm1Q61937 292 aaKnown RBP20.01■□□□□ 0.79
Col1a1-201ENSMUST00000001547 Os9Q8K2C7 672 aa19.99■□□□□ 0.79
Col1a1-201ENSMUST00000001547 NeflP08551 543 aa19.94■□□□□ 0.78
Col1a1-201ENSMUST00000001547 Supt5hO55201 1082 aaKnown RBP19.94■□□□□ 0.78
Col1a1-201ENSMUST00000001547 Tnnt3Q9QZ47 272 aa19.94■□□□□ 0.78
Col1a1-201ENSMUST00000001547 Eif5bQ05D44 1216 aaKnown RBP19.91■□□□□ 0.78
Col1a1-201ENSMUST00000001547 Lmod2Q3UHZ5 550 aa19.89■□□□□ 0.77
Col1a1-201ENSMUST00000001547 Plekhg3Q4VAC9 1341 aa19.87■□□□□ 0.77
Col1a1-201ENSMUST00000001547 Brd4Q9ESU6 1400 aaKnown RBP19.82■□□□□ 0.76
Col1a1-201ENSMUST00000001547 Zbtb7cQ8VCZ7 619 aa19.73■□□□□ 0.75
Col1a1-201ENSMUST00000001547 Rb1cc1Q9ESK9 1588 aa19.71■□□□□ 0.75
Col1a1-201ENSMUST00000001547 Chic1Q8CBW7 227 aa19.63■□□□□ 0.73
Col1a1-201ENSMUST00000001547 Hnrnpul2Q00PI9 745 aaKnown RBP19.62■□□□□ 0.73
Col1a1-201ENSMUST00000001547 Cep164Q5DU05 1446 aa19.61■□□□□ 0.73
Col1a1-201ENSMUST00000001547 ClspnQ80YR7 1315 aa19.58■□□□□ 0.73
Col1a1-201ENSMUST00000001547 Dcaf1Q80TR8 1506 aa19.57■□□□□ 0.72
Col1a1-201ENSMUST00000001547 Clip1Q922J3 1391 aa19.57■□□□□ 0.72
Col1a1-201ENSMUST00000001547 Rtl5Q5DTT4 599 aa19.55■□□□□ 0.72
Col1a1-201ENSMUST00000001547 Ifnlr1Q8CGK5 535 aa19.55■□□□□ 0.72
Col1a1-201ENSMUST00000001547 Eid3Q3V124 375 aa19.45■□□□□ 0.7
Col1a1-201ENSMUST00000001547 Gm13697A2AK42 830 aa19.43■□□□□ 0.7
Col1a1-201ENSMUST00000001547 Ubl4bQ9CQ84 188 aa19.43■□□□□ 0.7
Col1a1-201ENSMUST00000001547 Erich6D3Z6S9 713 aa19.41■□□□□ 0.7
Col1a1-201ENSMUST00000001547 Zbtb4Q5F293 982 aa19.41■□□□□ 0.7
Col1a1-201ENSMUST00000001547 Fkbp15Q6P9Q6 1216 aaKnown RBP19.4■□□□□ 0.7
Col1a1-201ENSMUST00000001547 NacadQ5SWP3 1504 aa19.37■□□□□ 0.69
Col1a1-201ENSMUST00000001547 DaxxO35613 739 aa19.37■□□□□ 0.69
Col1a1-201ENSMUST00000001547 DiexfQ8BTT6 772 aaKnown RBP19.36■□□□□ 0.69
Col1a1-201ENSMUST00000001547 Mapk8ip2Q9ERE9 830 aa19.36■□□□□ 0.69
Col1a1-201ENSMUST00000001547 Atp1b4Q99ME6 356 aa19.3■□□□□ 0.68
Col1a1-201ENSMUST00000001547 Ccer2J3QPU5 274 aa19.27■□□□□ 0.68
Col1a1-201ENSMUST00000001547 Nlrp6Q91WS2 869 aa19.26■□□□□ 0.67
Col1a1-201ENSMUST00000001547 Hdac5Q9Z2V6 1113 aa19.25■□□□□ 0.67
Col1a1-201ENSMUST00000001547 Sall2Q9QX96 1004 aa19.24■□□□□ 0.67
Col1a1-201ENSMUST00000001547 Baz1aO88379 1555 aa19.21■□□□□ 0.67
Col1a1-201ENSMUST00000001547 Anp32aO35381 247 aa19.2■□□□□ 0.66
Col1a1-201ENSMUST00000001547 Prdm10Q3UTQ7 1184 aa19.2■□□□□ 0.66
Col1a1-201ENSMUST00000001547 Chic2Q9D9G3 165 aa19.16■□□□□ 0.66
Col1a1-201ENSMUST00000001547 BlmO88700 1416 aa19.16■□□□□ 0.66
Col1a1-201ENSMUST00000001547 Gm13695A2AK44 830 aa19.11■□□□□ 0.65
Col1a1-201ENSMUST00000001547 Golga3P55937 1487 aa19.09■□□□□ 0.65
Col1a1-201ENSMUST00000001547 Polr3glQ8R0C0 218 aa19.07■□□□□ 0.64
Col1a1-201ENSMUST00000001547 Setd5Q5XJV7 1441 aa19.07■□□□□ 0.64
Col1a1-201ENSMUST00000001547 ArxO35085 564 aa19.06■□□□□ 0.64
Col1a1-201ENSMUST00000001547 Kif15Q6P9L6 1387 aa19.02■□□□□ 0.64
Col1a1-201ENSMUST00000001547 Rsf1E9PWW9 1441 aaKnown RBP19.01■□□□□ 0.63
Col1a1-201ENSMUST00000001547 Anks4bQ8K3X6 423 aa18.99■□□□□ 0.63
Col1a1-201ENSMUST00000001547 CatipB9EKE5 520 aa18.98■□□□□ 0.63
Col1a1-201ENSMUST00000001547 Plppr3Q7TPB0 716 aa18.95■□□□□ 0.62
Col1a1-201ENSMUST00000001547 Gm38655A0A286YDK6 273 aa18.95■□□□□ 0.62
Col1a1-201ENSMUST00000001547 Clstn2Q9ER65 966 aa18.95■□□□□ 0.62
Col1a1-201ENSMUST00000001547 Kdm5dQ62240 1548 aa18.92■□□□□ 0.62
Col1a1-201ENSMUST00000001547 Ercc6F8VPZ5 1481 aa18.92■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 93.8 ms